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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000117_pilon:705240..713026- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14214.5.p1 ID=MSTRG.14214.5.p1|Name=MSTRG.14214.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7787bp|location=Sequence derived from alignment at sc0000117_pilon:705240..713026- (Clytia hemisphaerica_ch_hm2_pilon)
ATCCACTTTCAATTGAAGAGCATCGGATAAACATCAACAAAGAATCAAAA
TGAAGATTTTCATTGCCGTCGTCCTTATTGCTGGTAAGTTTGTCTCTCTT
ATTTGTCTAAACCAAAGATTGCAAATCTCTAAACAATGATTTTTCTGACA
ATGTATAAACAATGGAAGTTCTGCCGTTCGCCGTTTCTTTTTACACTGGA
CTGATGTTTAGCATACTTTTTTCTTTTTAGCATGCTACGCCGCAGAACCA
TGTCCAAACTCACTCTGCAAATGGAGAGAAGATGGATTTTCCGCCCGAGT
CAGTGATGATCATCCAGGATTTTTCTTCCAATGTTCCAACTGGATCGCTT
ATTGTTTCGATTGCCCAGCCAACACAGTTTTCGACAACCACTTGAGAGTC
TGCGTCAACCCACACAAACCCACAACAACCACCACCACCACCACACCTCC
ACCACCAAAATGTACGTATACACGCTGTCTAATTCCTCATTTTCAGGGAC
CTCCTTTTTTGGCCTTATAAAACTGAAAAATTCTCTCAACATACACAATG
GTTTGCAAATAATTTCTTTAAATTAAATTTTTTTCTCAAATCTTAGGCCC
ACAAAGCTTATGCAATTGGCAACCTGTTGGAGCTTTAGTTAGCTACCCAG
GAAAACCAACCTACTACGTTCAATGCGCCAACACTGGAGCTGTTTGTAGA
AAATGTCCAGACGGTCTTGTCTTCAGAAATGGAATCGATGTTTGCGTCCG
TCCAGCTTCTGGCAAAAAACATTAAATGTCAACGACGTCTACGAACTCCC
TCAACTCCTCTCTCTTGCCTCTTTGTAAATTTTGATATACATGTATATGT
CTTTGTTATTGTTTTGTTTTTGATCAAAATATATATTTCTGCACAATGAA
AGTAAATCTTCTAACCCTTGTCTATTCTTGATTCTGTAAAGATCTGATGC
CAAGTATACTAAATTTTCCTAAACGAAGAACTACAACATCTCAACAGATA
TAGCCTTTCTTTTTTGATTAAGTGGTAAGTAAATTGTAGTGGTCGAAAAA
GAGACTGGGTTCTAAAAAGAGATAATCAAGAAATTTTCGCTACACAATGA
TAAACTCTAGCCAAAAATGTTCATATACATAAACGTTAACTAAAAATTAT
TTGACTGTAAATGATTTTGTAAAAATACTTGAGAATTCAACTTTTCACTT
AGAAAACCATTGAATTTTGGTTCCAGTTGAAAAACAAACTGTAATTCCCT
CCCATCGCACCATCAAAAGGAAAGATATTTATTGTACCTGTACACCTTGC
TCGGTTTGGTTCAACATACTTTGTTTGCGCCCATATTTATCTCTAAGGTG
ATAAGAATAAAGTTTGATGAGTTTTTTATTCAGCCATCAAAACTAATCAA
AATAACTGTAAGCAGAAAATTTCTGATTGCCACTTAACCCTTTCCCTTGA
CAGAGATTTCAGACCTTTACAAAATCAGCTGTTCTTATATCCATACAGGA
GTGAGCGAACCTTTTCTTAAAAAATGACATAACACCCTATAGAAAATTGT
AAAATTTTAAGTATTGAAAAATTGTTACTGTTATACCGTGATTGAAACGT
TGCTCTGACAGAAACAATCTTTATTTCAGTGAACCTTTCAACCCTTTGTA
AAAGTCATGCTAGGTTCCTGTTCTGAGAAAAGTCTCCCCTCCCCCTTTGG
AAAAGAAACGATCTTGTCGATTCACTCCTGGAAAAATGAAACATAGGTTG
ACTGAAATGCAATGGTCTTTTGTTCTTTCTTTACAAATAATTTTCAACTG
CCTCTCCCCCTCCCCTTGTCACACAAATACTTAACCCTTGAGTGGATTGA
TTTTTGCATGGACTTTTTTCGCGAATTGAGAATCTAAACTTACGTCTCTT
GATTAAAGTTCGCAAATAAACCTCTTTTTAACCTAATTTCTTTCATTTTC
CTCGGGGTCTGGGCTGAAGTTCGGATTTTAAATTTTTCGCATATACTAAA
TTTTGCAAAAAAGGGCCAAAATCGCGAAAATCATAAAAACTGATTCACGC
GAAATTTAATCTACGTAAGATAAACATTTAACTGGCTCTCTATCAAAAAA
AAAACTAAGGAGCTCATTAGCAACACCCTAACGCAAAGAGTTCATCCCTT
TAGTCCCAAAGTTATAGTTTTACTGATTTAAAAATCAATTTTTTGAGCCC
CCTGAAGGAAAAGGAAAGGAAAAGGAAAGGAGGTAAAACAAGTTCACCCC
CTCCCTCCATCGTTGCTAATTGGCAACAAACACAACAATGAATGCAGATA
AGGAAGGCATTTTAGTAGCTAGCCAATTTATTAAATCCTGAAGTTGTCTT
ACAATCTTTAAATTTGAAACACCAAAATTTGTGGAGAAGTCAGTGAATGT
GCAGCCAGAATCACAAACTTTCATCTCGGCAATTTTCATGCATTGGTTAT
CATTTGTCTTTTCCCGAAGAAGTATTGAAGAGAACGAAACCCAAAATAAC
ATGAATTTTCCTAATGAAGATTTAAATTACAGAAAAAACATATATCATAA
GTTTATCAGGAGAAAGTAACTTGAATAAAGAGCTGCGACAAAAAAACCAA
CATTGTCGTGTCAACAATGAAAACAAAATATTTGGCAGAATGACCAACGA
TTCCGAGTGACCTTAAAAAATGTCAGCCACCGGAATCTAAAATATAATCG
ATAGTTGTTTGTTTGTTTTAGTTTTTTATATTTTGTAACCGAAAGAGCTT
TAAAATGATCTAGAAATATTAAAGTTGAAGTAAGTAGAACTGAGAACGTC
CTTTAGGCAAAATATTTCCAGCAACAATTTTTTTTTTGCAAGAGTACGTT
GGAAATTAAGACCAGTGATCTAAGAAGATGAAGTGTACATGAACGGAGAA
AATCAAACAGAGGGATCGAAAAAAATGCCGCACGCGCAACAAGAAACACA
CGTTGATAGGGCGTCTTCACTTAAACGACAAAAACAGTTAATCACTGAAT
GTCTGTCAGGAATTTAAAAGAACCAATCAGCACAAAGATGTTGATTAAAA
TTTGTGGTAAGGAAGTCATTAGGGGGAATCAATGTTCCAATTAACGATCA
ATTATCTTTCCACTATAAATAGTGGAAAAAATCAAGGCTCAAGCATCCAC
TTTCAATTGAAGAGCATCGGATAAACATCAATAAAGAATCAAAATGAAGA
TTTTCATCGCCGCCGTTCTTATTGCTGGTAAGTTTCTTTAGCGAAACCAA
AGATTCCTGATTCTTACAAAATGATGGTTCTGTCAATGTATAAACAAAAC
AAAAGTTCTGCATTTCACCATTCCCACAATGTACTGATGTTTTGCATACT
TTTTCTTTTTAGCATGCTACGCCGCAGAACCGTGTCCAAACTCACTCTGC
AAATGGAGAGAAGATGGATTTTCCGCCCGAGTCAGTGATGATCATCCGGG
ATTTTTCTTCCAATGTTCCAACTGGATCGCTTATTGTTTCGATTGCCCAG
CCAATACAGTTTTCGATAACCACTTGAGAGTCTGTGTCAACCGAAAGACC
ACTACCACTACCACTACAACTACTACCACCACCACCACCACACCCCCACC
ACCAAAATGTACGTTCAATGTAGTTTCTTTTTATTTCTTACTACTAACTC
TAACCAATATACCTTTCAAATACATTAGCTCCTTTTTTTCTAGCACTTAT
ATTTATTGCACTTAAGCCACTGAATCCGAGGATGACTTTTTGATTATTTT
CTAAACCGATATCCTTAATATTCCAGGTCCACAAAGCTTATGCAATTGGC
AACCCGTTGGAGCTTTAGTCAGCTACCCAGGAAAACCAACCTACTACGTT
CAATGCGCCAACACTGGAGCTGTTTGTAGAAAGTGTCCAGACGGTCTTGT
CTTCAGAAATGGAGTCGATGTTTGCGTCCGTCCTCCAGTCACAAAACATG
GCAAAAAACATTAAATGTCAATGACGTCCGCGAGCTCCCTCAACTCCTCT
CTCTTGCATCTTTGTAAATTTTGATATACATTTATATTTCTTTGTTAGTT
TTTTGTTTTTGATCAAATATATATTTCTGAACAATGAAAGTAATCATGTG
CTGAAGATTTATTTTTCGATATGGGAAATAACATATGGGGGACCTAATTA
CCGGGGTCAATAACAACAAGGTAATTATAGACCGAAGCCTGGACATTTAA
ATCCAAATAAGGAACTCTTCTTTTCAAAAAATAGTAGCGAGTTTATGTAT
TCGAGATAAATCGAGGGGGACGGTATAATGCAAAGCTGAAATGGGGCCGA
AACCGCCGTCCACTTTGCTCGACGACGGTAAAAACACTAAGATACCGTCG
TCTGTTTAGGTGAGCAAAGGCGATATGGAGCCGTTCATCAACTATCGACT
TTGTTTTGTATCGATTTCACTTACCGTCGCCCTCGATATCCTCCGATACA
TAAACTCGATAGTAACAAGGTTCAGGGGGGGGGGGTAGGAAAAAATCGAA
AAATTAACAAGCAGGGGTCGTTTATTAGGCACCTGAGAGTGACCGGTTTA
TTGCAACTGCTATGCTGCTAAGGGTCAAATAATGAACAAACAATACTTAC
TAAGAAATTCCCCGCTGCCAAAATGCATCAAACGTAGGCTTAGAAAATTT
ATTTAAAACCATTTAGTAAGATAGGATTACCTGAATCTTATTTTGCTTTG
GAAGTCACCGTTGTGTGTCATCGGTCCATAAAATATCCATTTGTATTGAC
CTGTGAAAAAAGGGAAGAATGAAAAATCAAACATAACAAACTAGAAAGCT
GAATGACGCTACCTGATATGATTGAAGTTTGACGAGTTTGGCTAAGCAAA
GCAAAAACAGTTTAAAGCAAGCAGATCCAGAAAAATAATTTAGCGAACGA
ACGATTGAATACACAAAAAGCCCGATTAAATCTGTAAATATAAAATGGTT
TTCTTTTTACAAAGTGACATCTGTATGGAAATTTTGAAAATTTTCCAATT
GCCACTATGAACTTTTAGGAAATTTAAGAACAGTACTTCTGATAATAACG
GGTGATAACGGGTTCTTTCGGCGGTTTTGAAAAAGTTCATTCTCAAAATC
AGTTTTTTTTGGAAATCAACATTGGCTGGCAGATCTCAAGTATTACAGGT
CAAAGGGTGTATTTACACTGAAAGTTTCAAGCTAATGGCCTTAACGTGTC
CAAATCATATATGTTGTTACTGATGTACGTAAAACGTTTAAGCGGAAGTA
ATAATTGCGTTTGTTTTTTTTAACGTGTTCGAAGCAGCTCAAAATGTTGC
AGCAATGATCTTAAAATTACCAAACGGTTCAAAATACAACAAATTCACGT
TGATTTGCACACTTTCTCGGTATGATAAAACTATTGTTTTACCATATTAA
CACAAAATCATGGTTTTGGCATGAAGTTTGCTTGAAATACGATCACGCAA
TCGTGCAAAGTTAGATAATAAGAGCCAAAGGAGAAGATCGTGCAGCTCCT
TGTCCCATATTTTCAAGCAACTTTCAAGCAACAGTGTGAAAACACCCAAA
ATCCTACTTAATTTAGTAGCACCCCTTACATACCCAGTTATCAAGATATT
ATATTTAGTTTAATGACAATTCAAGAAAACAGTTTCTCCGGCGATCTTGA
ATTCTGACTCTAAAAATCAGTTTTGCTGGAAATGAAACGCTGCAGGCAAA
TCTCAAGTATCGTAGATAAAAATCCTGTTTAAATCTAGTAGCTCCCCTTT
AATGTGCCAGATATTACATTTAGTTTAATGAAAAGTAGATCGAATTAATC
TACTATGTGGGTTTCAAATATATTAACCGGTAATTTCCGGTTACGATCGT
TAAGATCTAAGAATGTAGACCTCGAATTAAAAAATATTAGTTGTTTTCCA
TTTTAATTGCCTTAAACTCAAACGAATGTTCAATCTAAAATGTAGAACAC
TGGCAACATCTTTCGATGTATTTTTGAAAAAGCCTCCATCTATAGAACCT
TATTCAGCCTTCAATAAGAAATCATCAAGTGAATTTAATCCCAAAAAAGC
TACCATACAAGTTTTCCAGCGAGGGAAGAGAGAATGCTTTCACCAAGGAA
CTTGTCTCCTTAAGGCTTAACAATCGTAAAAAAGATAATCTGGAATGATC
AACAACAGATTATTCCTGTTATTGAGCATGCTACATATCAGAGGCCCCTC
AAGCGGTTTACGCAATGTCGTGATGGGGAATTTTTTTCTAGCGGGATTTC
GCATGGATTAAACTTATTCTTCACAAATATTAAAAATCCCAAAATTGGCC
AAAACCCCTAGAAAAATGAAAGAAAAAGAGGTCCATTCGCGAAATTTAAC
CCACACGAAAATTTATGATTCCTAAATTGCGAAAAAGTCCACGCAGGGAT
TAATCCACTTGAGGTAGGATCAATTTTTCATCTACTGACTGGGATATTTC
ATTGATGAAAAATTATTCCTAATACAAAGAATTGAACTCCTATTCCAGAT
TTCTGCACCAAGATTGTTTAGTGGTAAGGAAGCAATCAGAAAAGAATTTG
AGTGGTGGTCGATATCACCATGACAACTAATGGAAAACGTCAAGCCTTCA
CTGATGCCCAGTTGACCAAAGGAAGTTTAGATTTACCCTACATAATAATC
ATTTCATAATGAGTAACCACGGGTGCCTACTCTAGCAATTAAGTCAGAGA
GACCAAAGGAAGTTAACAAACAAAAAGAAGGCTAAGGAAGTATTTAAGTT
GAGGTTTTAAGCTTCACTGGTTTTTCCTATAAATACTGAAAAATCTTTTG
AAACAAGGCATCCAACATTCTAAATTGATACAAATCCAAAGAGATTCAGT
CAATCAGATACTAAATCACAAAAATGAAGATTTTCATCGCCGTCGTACTT
ATTGCTGGTAAGTTTCTCCTCGGTATGATCAAAGCCTCTTTAAGTTATCA
AAATGAAGCTATTCTTGCCGAGATAAGCGAAACCTACTTCAATTGACCAT
ATTCAAACCTAATTTCTACCTTCTTTTAGCATGCTACGCTGCAGAACCAT
GTCCAAACTCACTCTGCAAATGGAGAGAAGATGGATTCTCCGCCCGAGTC
AGTGATGATCATCCAGGATTTTTCTTCCAATGTTCCAACTGGATCGCTTA
TTGTTTCGATTGCCCAGCCAACACAGTTTTCGATAACCACTTGAGAGTCT
GCGTTCAACCAAAGAAGACATCCACAACCACCACCACCACTACCACAACT
ACGACCACCACGACACCCCCACCACCAAAATGTATGTTGTGAAATCGTTT
TGTTTTCTTTATTTATACAATTTAACCTTGACCAATATACTTTCGAATGT
CATTGCGTTCTTTTCCTCAACATTGTATAGCATTGAAAAATCAACTGAAT
AGAGGATAAGCTGTCATTAAGTTATTATGATGTTTGTTGAATAAAACTCA
AATAATATCCTAAATATTTCAGGTCCACAAAGCTTATGCAACTGGCAACC
CGTTGGAGCTTTAGTCAGCTACCCAGGAAAACCAACCTACTACGTTCAAT
GCGCCAACACTGGAGCTGTTTGCAGAAAGTGTCCAGACGGTCTTTTCTTC
AGAAATGGAATCGATGTTTGCGTCCGCCCTCCAGTCTCAAAACATGGCAA
AAAACATTAAACGTCGACGATTTCGCCGAACTCCCTCAACTCCTCTCTCT
CTCGTCTCTTTGTAAATTTTAATATACATGTATATTTCTTTGTTAGTTTT
TGTTTTTGATCAAATATATATTTCTGCATAAATAAAA Coding sequence (CDS) from alignment at sc0000117_pilon:705240..713026- >MSTRG.14214.5.p1 ID=MSTRG.14214.5.p1|Name=MSTRG.14214.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1404bp|location=Sequence derived from alignment at sc0000117_pilon:705240..713026- (Clytia hemisphaerica_ch_hm2_pilon)
GTCCACAAAGCTTATGCAACTGGCAACCCGTTGGAGCTTTAGTCAGCTAC
CCAGGAAAACCAACCTACTACGTTCAATGCGCCAACACTGGAGCTGTTTG
CAGAAAGTGTCCAGACGGTCTTTTCTTCAGAAATGGAATCGATGTTTGCG
TCCGCCCTCCAGTCTCAAAACATGGCAAAAAACATTAACATGCTACGCCG
CAGAACCGTGTCCAAACTCACTCTGCAAATGGAGAGAAGATGGATTTTCC
GCCCGAGTCAGTGATGATCATCCGGGATTTTTCTTCCAATGTTCCAACTG
GATCGCTTATTGTTTCGATTGCCCAGCCAATACAGTTTTCGATAACCACT
TGAGAGTCTGTGTCAACCGAAAGACCACTACCACTACCACTACAACTACT
ACCACCACCACCACCACACCCCCACCACCAAAATATGAAGATTTTCATTG
CCGTCGTCCTTATTGCTGGTCCACAAAGCTTATGCAACTGGCAACCCGTT
GGAGCTTTAGTCAGCTACCCAGGAAAACCAACCTACTACGTTCAATGCGC
CAACACTGGAGCTGTTTGCAGAAAGTGTCCAGACGGTCTTTTCTTCAGAA
ATGGAATCGATGTTTGCGTCCGCCCTCCAGTCTCAAAACATGGCAAAAAA
CATTAACATGCTACGCCGCAGAACCGTGTCCAAACTCACTCTGCAAATGG
AGAGAAGATGGATTTTCCGCCCGAGTCAGTGATGATCATCCGGGATTTTT
CTTCCAATGTTCCAACTGGATCGCTTATTGTTTCGATTGCCCAGCCAATA
CAGTTTTCGATAACCACTTGAGAGTCTGTGTCAACCGAAAGACCACTACC
ACTACCACTACAACTACTACCACCACCACCACCACACCCCCACCACCAAA
ATATGAAGATTTTCATTGCCGTCGTCCTTATTGCTGGTCCACAAAGCTTA
TGCAACTGGCAACCCGTTGGAGCTTTAGTCAGCTACCCAGGAAAACCAAC
CTACTACGTTCAATGCGCCAACACTGGAGCTGTTTGCAGAAAGTGTCCAG
ACGGTCTTTTCTTCAGAAATGGAATCGATGTTTGCGTCCGCCCTCCAGTC
TCAAAACATGGCAAAAAACATTAACATGCTACGCCGCAGAACCGTGTCCA
AACTCACTCTGCAAATGGAGAGAAGATGGATTTTCCGCCCGAGTCAGTGA
TGATCATCCGGGATTTTTCTTCCAATGTTCCAACTGGATCGCTTATTGTT
TCGATTGCCCAGCCAATACAGTTTTCGATAACCACTTGAGAGTCTGTGTC
AACCGAAAGACCACTACCACTACCACTACAACTACTACCACCACCACCAC
CACACCCCCACCACCAAAATATGAAGATTTTCATTGCCGTCGTCCTTATT
GCTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000117_pilon | genome | sc0000117_pilon:705240..713026 - |
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