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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000117_pilon:397028..401695+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14191.1.p1 ID=MSTRG.14191.1.p1|Name=MSTRG.14191.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4668bp|location=Sequence derived from alignment at sc0000117_pilon:397028..401695+ (Clytia hemisphaerica_ch_hm2_pilon)
acaaaaagttatatagatgaaaaaaaatagaacacACAGAGAGAGTGTAG
GAGGGCTCAAAatcttttctggaaaaaaaggagagaaaatAATAAATCTT
TCATAGGGATATTTTTGGTCCTTAAAGGCAAATATATCAGTCTCAAAGAC
ATCACAGTGTTTGTTTTGCTTCTGGAGTActttttgatagaaaaattaTC
TTCTAAATATTGACGTTTTTTGGACGTTGTTTACAATGGATACAGCAGGT
TACCTGATAACAGatggtcataattttcttacgcgtaCGGTAAACCTTTG
AATGCACTGAAAAATCAATGACCGAGTAAATTTaataacaagaatcttgt
ttcaaaaattgaacttttttctgATACAGCGTCCTATTTCAACACCATAC
ttaactttgttgtcatccccagtccctTTAAAGCGATGCGCAGACCCAAC
GAAATTGAGCTGATTCGTCAgactcttttgttttttataccGATCACCTT
AAAGAGCTTCACCGTGGTGGACAGAAAACAATCACGATCTGATTTAAGTT
ACAATAGGGTTGcactatttttatttcaatttgatATTTCTAAATATTCA
GTATTCTAGACTGGCAGACAATATGCATACGAAAAAACAAAGTTAATTGA
AAACCCTGTCTGTATGGAACAGAAAGAATCAAAAGATATACAATGATGTT
GAAATTTGTTTCATTGATGATTGCGGCTCTGGTTATCGTTGCCATGACAA
AAGCATCTCGCCCAAGATGcaaatcaaatttcagattCGACCGTGATAAT
CCGAACAACGATGACATATACGCCAAAGCGTGGCGAACACCATGCTCCAA
AGACGTCGAACCTATTTGCAATCAAAGCGTTATAATATCTTGGATGCAAA
TGCAGCCTTTCACCAGCGCTCAGATTCTCAATAAAACAGTTTGGCCGACC
ACTGGATTATTACAACAAATCATATCGGTGGCTTTGGCAGAATGCTGTGG
CAACTGTTTGAATATTACGTTCAAATACGTAGAGAATAGGACACAGTTGA
TCTCctttgaaaacaaagaagaaagtgACATTATATTGCCGACCTTTAGT
CAAGGACGCCAGTATCAGGTCAgtgtacacttttttataagaacaaagta
aattaaatattaggaacaagttaagaatattttacgGACTCTAAAAACAG
CAAGCATCCTGTGAACATGAAATTTCTCCTTCAAGATATAGATTGATGTA
CTTTTTATTAGTTCGACTCTTATCTATTTGCATGCTTGGTCATAAACCAG
ACCGATTCCGcatgactttttattttttttatttttacgaaCGACAAACG
ATCAGCATATATAtgtacaggggggggggtgaagcagttagtacaagaca
tcatgccggttagtaccgtggtggtgtgccatatgaattggataaaatca
cttagtactcagatgtactaactgcaaaaaagggtggtcccctgctaaaa
atttgccaaattttggtactaattgtgtaaaaaataggattttgtgagaa
aataaaaaaaaaagaccatattttcccaaaaaaattttttgggaagtaga
tttttttttcaaattttcgaaattttttttttaaatcttaaaaacaattt
gctggttgcaatagaaatttgattttctaaaatgttgttttttcctattg
aaagctatggatattgaatcatttttaagatattaaatttgatttttatt
tattttattgaatttatgaaggtcaaaagcctttttcaaggctaaattca
gttagtactaactgtactaagtgtaccaaggtggtggtgttactaacttc
ttccgagaaagcagttagtaggcatgatgtcttgtactaactgcttcacc
cccccccccctgatatgtACGGATTTTAGTTACATTTTACTTGTGCAAGG
TTGTGAATATTCGTTCGGACCTGTGCAtagtttaaatttttgcttcaatT
TTTTGGGTGAAACTTTATGTCAGTTAGAAACAGACTTGCATGGTTATTCC
TAACTGGATTTTTCGGATTCGGTCTATAGGTGATGGTTACCgacagaaat
ttttaaaattctatttttgaCCTTTTCAGTTTCATCAAAGATACCTTATT
TATACGTAAACAAATTTACACAGTTCAGATGTGATAATAATAACTTCATT
TTCAGGTCAATTCAACTCTACCTATGTTGAATATCCCAGTCATCCAGCTC
TCTTCCGCCATGTTTATTATCAAATCATCCATTTCGGCGACATTGTTTGC
ACATGAGGTTGTCATGGCGATCATTGATATTTGGCCATTGCTCGGGGTAG
CAATATTGTTATGTTTTGCAGCCGGGGTTGCGATTTGGATTGTGGATACA
TGGTGGAATAAAGAACACTTCCCGAGAAGATTTGTCAGCGGTGCTTTTGA
AGGTAGTTCTTTTGATACTGACTTAGTAACTTGGTAACTTAGTAACTTGG
TGATTTCTTGGTTTGTTATAATTGATTCTAAGGAACCTTTTATACGGCCA
AAAGCTCAGTCGACAATGCTAGCAATCATTACAGATGAACAGTTTGACTA
ATGACTTtataatgatgaaatttttgcccTTTTGGATGATGCAGATGAGA
TGAAGTTTTTGTAAGATACTTTCATAATTGgccatttgaagtaataaaaa
tgacgcgttctttagaaaaagtagcaaaattgttttattattggttaacg
accaaccaaatcaaataagagcttgtaaaaactccatctcgtcccggaTG
ATGagagcattgagtttcaagcccgaagggctagaggtcaatctctttgg
taggatttgaagccaacaaatcctaccaaagttgcgcggccttgagcgac
ccgcctggtttttacacaaatgacagattgaaactaaaatttaccgctta
atttcgaaaaatatatcactcgaaaacaaaggaattgctagattcaatcc
gtcatcaaaaatacggcgcatattttaaggcttcaatttttcttgcctga
gaaaggttagagattgacctctagcccttcgggcttgaaactcaatggat
gAGAGTATTGAAAATGTCTTCTTAATTTAAAATCTTTGTCGAGTTCTCAT
ATTGTAATACTAAAACtaagtaaagaacatttttttatttttcaggctTT
TGGTGGGCGTTTATCAGTATGACGACCGTGGGTTACGGAGACAGAGTTCC
GCGGTCTGTCCCGGGTCGTCTCATATCCGTATTCTGGATACTTTGCGGAA
TGACCATATGTGCTTTACTAACTGCCGCCCTGACAACCGCCATCACCACA
GTAGCGGCATCTCAAAGACCAACAGTTAATAAAGGGCGGGTTGGTTTATT
GAAGGATCGAGTGTTCGAGAAATCGGTTTTGATGAAAGGTAATGCAGACA
AACGATATCAAAACAGTGTGCCAGAGCTGACGAAAGCTCTCATCGATGGT
AGAATAGACGGTCTTCTGCTGGATATCTACACAGCTAAATACCATTCAAA
AGAAATTACAGACGAGCTTTATGTTGACTCTATAGTTACCGATATGGACC
AATCATATCTCGGTTTGACCATCTATAGGGGCGATTTGTATGAGTTAATA
CTGGAATATATCGAATATCATCGGGATTATATTAACGATTTTGTGTTCGA
TACTTTCCGCTCAATGGAAGAACTTCAATCACCAGAGATCGCAGCCAATT
TGATTTTTACCACTAAATCTGGCATGTTTGAACCGATCTTGTATTCTTGT
TTAATCATCCTGGGATTGTCCTTACTAATAGGTGGAACTTACGAGTTGAT
ACAATatagaaaacgaaagcgattgCATCGCAAAAGAACAATCAATAATT
TCACgttgaaatctttaaaaaaggaaGAGAAAATGTTGACAAGCGAActg
gaagaacttttaaaacgTTGGGACAAACATTTACTAACATTAATGAATAC
TTACTCTATTGAAGGGATGTTCAAGAAATCAAGCACAACTTTCCCTGATA
TACTAGTCAAATTATCACCCTATAAAATAGAGAAAGACTATTCCCCGGAT
GATGTCATCATTGAACAGGCTGAAGAAGCAGCGTCAACACATTCTCAGCA
AACACCAGTTAAAAAGACTACACCTTCTAAAAAGAAGCCGTTGAAAAAGA
GACCATCTGGTACTAAGAATAATAAAATCTCTCCAGAACCTGTCGCGGAT
TTAGATGATAGCATAGACGGGGGCAGTGAAGAACAACGAGGGAACGGGTA
TGTAAAACTACGTGACAACGAATCGAAAAAGAAACCGCAACGAACTTCAA
AAGCAAAACGGACGGGTTCCTCTACTTCAGGAGGAGGCGTTcgtaaaaaa
gggaaaaagactaaaaaaGACAGGATGGTTGACAGTGATAGATCGCATTA
TGGGACCTACGAGGATCAGGAGAGTAGTGTACATTTACCAAATACGATGA
GGTTGCCACCGTTGAGACATCATAGAGCTGAAGATATTGTCTAAGTTTTC
GGCTAGGTTCattttttaacagattttatagagttttttaggaattttta
tcatgtcattatagtttgtttgaaatagtttttttaaatttagataAAGG
ATTATCCTTCCACTTTTT Coding sequence (CDS) from alignment at sc0000117_pilon:397028..401695+ >MSTRG.14191.1.p1 ID=MSTRG.14191.1.p1|Name=MSTRG.14191.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6066bp|location=Sequence derived from alignment at sc0000117_pilon:397028..401695+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGTTGAAATTTGTTTCATTGATGATTGCGGCTCTGGTTATCGTTGC
CATGACAAAAGCATCTCGCCCAAGATGcaaatcaaatttcagattCGACC
GTGATAATCCGAACAACGATGACATATACGCCAAAGCGTGGCGAACACCA
TGCTCCAAAGACGTCGAACCTATTTGCAATCAAAGCGTTATAATATCTTG
GATGCAAATGCAGCCTTTCACCAGCGCTCAGATTCTCAATAAAACAGTTT
GGCCGACCACTGGATTATTACAACAAATCATATCGGTGGCTTTGGCAGAA
TGCTGTGGCAACTGTTTGAATATTACGTTCAAATACGTAGAGAATAGGAC
ACAGTTGATCTCctttgaaaacaaagaagaaagtgACATTATATTGCCGA
CCTTTAGTCAAGGACGCCAGTATCAGGTCAATTCAACTCTACCTATGTTG
AATATCCCAGTCATCCAGCTCTCTTCCGCCATGTTTATTATCAAATCATC
CATTTCGGCGACATTGTTTGCACATGAGGTTGTCATGGCGATCATTGATA
TTTGGCCATTGCTCGGGGTAGCAATATTGTTATGTTTTGCAGCCGGGGTT
GCGATTTGGATTGTGGATACATGGTGGAATAAAGAACACTTCCCGAGAAG
ATTTGTCAGCGGTGCTTTTGAAGgctTTTGGTGGGCGTTTATCAGTATGA
CGACCGTGGGTTACGGAGACAGAGTTCCGCGGTCTGTCCCGGGTCGTCTC
ATATCCGTATTCTGGATACTTTGCGGAATGACCATATGTGCTTTACTAAC
TGCCGCCCTGACAACCGCCATCACCACAGTAGCGGCATCTCAAAGACCAA
CAGTTAATAAAGGGCGGGTTGGTTTATTGAAGGATCGAGTGTTCGAGAAA
TCGGTTTTGATGAAAGGTAATGCAGACAAACGATATCAAAACAGTGTGCC
AGAGCTGACGAAAGCTCTCATCGATGGTAGAATAGACGGTCTTCTGCTGG
ATATCTACACAGCTAAATACCATTCAAAAGAAATTACAGACGAGCTTTAT
GTTGACTCTATAGTTACCGATATGGACCAATCATATCTCGGTTTGACCAT
CTATAGGGGCGATTTGTATGAGTTAATACTGGAATATATCGAATATCATC
GGGATTATATTAACGATTTTGTGTTCGATACTTTCCGCTCAATGGAAGAA
CTTCAATCACCAGAGATCGCAGCCAATTTGATTTTTACCACTAAATCTGG
CATGTTTGAACCGATCTTGTATTCTTGTTTAATCATCCTGGGATTGTCCT
TACTAATAGGTGGAACTTACGAGTTGATACAATatagaaaacgaaagcga
ttgCATCGCAAAAGAACAATCAATAATTTCACgttgaaatctttaaaaaa
ggaaGAGAAAATGTTGACAAGCGAActggaagaacttttaaaacgTTGGG
ACAAACATTTACTAACATTAATGAATACTTACTCTATTGAAGGGATGTTC
AAGAAATCAAGCACAACTTTCCCTGATATACTAGTCAAATTATCACCCTA
TAAAATAGAGAAAGACTATTCCCCGGATGATGTCATCATTGAACAGGCTG
AAGAAGCAGCGTCAACACATTCTCAGCAAACACCAGTTAAAAAGACTACA
CCTTCTAAAAAGAAGCCGTTGAAAAAGAGACCATCTGGTACTAAGAATAA
TAAAATCTCTCCAGAACCTGTCGCGGATTTAGATGATAGCATAGACGGGG
GCAGTGAAGAACAACGAGGGAACGGGTATGTAAAACTACGTGACAACGAA
TCGAAAAAGAAACCGCAACGAACTTCAAAAGCAAAACGGACGGGTTCCTC
TACTTCAGGAGGAGGCGTTcgtaaaaaagggaaaaagactaaaaaaGACA
GGATGGTTGACAGTGATAGATCGCATTATGGGACCTACGAGGATCAGGAG
AGTAGTGTACATTTACCAAATACGATGAGGTTGCCACCGTTGAGACATCA
TAGAGCTGAAGATATTGTCTAAATGATGTTGAAATTTGTTTCATTGATGA
TTGCGGCTCTGGTTATCGTTGCCATGACAAAAGCATCTCGCCCAAGATGc
aaatcaaatttcagattCGACCGTGATAATCCGAACAACGATGACATATA
CGCCAAAGCGTGGCGAACACCATGCTCCAAAGACGTCGAACCTATTTGCA
ATCAAAGCGTTATAATATCTTGGATGCAAATGCAGCCTTTCACCAGCGCT
CAGATTCTCAATAAAACAGTTTGGCCGACCACTGGATTATTACAACAAAT
CATATCGGTGGCTTTGGCAGAATGCTGTGGCAACTGTTTGAATATTACGT
TCAAATACGTAGAGAATAGGACACAGTTGATCTCctttgaaaacaaagaa
gaaagtgACATTATATTGCCGACCTTTAGTCAAGGACGCCAGTATCAGGT
CAATTCAACTCTACCTATGTTGAATATCCCAGTCATCCAGCTCTCTTCCG
CCATGTTTATTATCAAATCATCCATTTCGGCGACATTGTTTGCACATGAG
GTTGTCATGGCGATCATTGATATTTGGCCATTGCTCGGGGTAGCAATATT
GTTATGTTTTGCAGCCGGGGTTGCGATTTGGATTGTGGATACATGGTGGA
ATAAAGAACACTTCCCGAGAAGATTTGTCAGCGGTGCTTTTGAAGgctTT
TGGTGGGCGTTTATCAGTATGACGACCGTGGGTTACGGAGACAGAGTTCC
GCGGTCTGTCCCGGGTCGTCTCATATCCGTATTCTGGATACTTTGCGGAA
TGACCATATGTGCTTTACTAACTGCCGCCCTGACAACCGCCATCACCACA
GTAGCGGCATCTCAAAGACCAACAGTTAATAAAGGGCGGGTTGGTTTATT
GAAGGATCGAGTGTTCGAGAAATCGGTTTTGATGAAAGGTAATGCAGACA
AACGATATCAAAACAGTGTGCCAGAGCTGACGAAAGCTCTCATCGATGGT
AGAATAGACGGTCTTCTGCTGGATATCTACACAGCTAAATACCATTCAAA
AGAAATTACAGACGAGCTTTATGTTGACTCTATAGTTACCGATATGGACC
AATCATATCTCGGTTTGACCATCTATAGGGGCGATTTGTATGAGTTAATA
CTGGAATATATCGAATATCATCGGGATTATATTAACGATTTTGTGTTCGA
TACTTTCCGCTCAATGGAAGAACTTCAATCACCAGAGATCGCAGCCAATT
TGATTTTTACCACTAAATCTGGCATGTTTGAACCGATCTTGTATTCTTGT
TTAATCATCCTGGGATTGTCCTTACTAATAGGTGGAACTTACGAGTTGAT
ACAATatagaaaacgaaagcgattgCATCGCAAAAGAACAATCAATAATT
TCACgttgaaatctttaaaaaaggaaGAGAAAATGTTGACAAGCGAActg
gaagaacttttaaaacgTTGGGACAAACATTTACTAACATTAATGAATAC
TTACTCTATTGAAGGGATGTTCAAGAAATCAAGCACAACTTTCCCTGATA
TACTAGTCAAATTATCACCCTATAAAATAGAGAAAGACTATTCCCCGGAT
GATGTCATCATTGAACAGGCTGAAGAAGCAGCGTCAACACATTCTCAGCA
AACACCAGTTAAAAAGACTACACCTTCTAAAAAGAAGCCGTTGAAAAAGA
GACCATCTGGTACTAAGAATAATAAAATCTCTCCAGAACCTGTCGCGGAT
TTAGATGATAGCATAGACGGGGGCAGTGAAGAACAACGAGGGAACGGGTA
TGTAAAACTACGTGACAACGAATCGAAAAAGAAACCGCAACGAACTTCAA
AAGCAAAACGGACGGGTTCCTCTACTTCAGGAGGAGGCGTTcgtaaaaaa
gggaaaaagactaaaaaaGACAGGATGGTTGACAGTGATAGATCGCATTA
TGGGACCTACGAGGATCAGGAGAGTAGTGTACATTTACCAAATACGATGA
GGTTGCCACCGTTGAGACATCATAGAGCTGAAGATATTGTCTAAATGATG
TTGAAATTTGTTTCATTGATGATTGCGGCTCTGGTTATCGTTGCCATGAC
AAAAGCATCTCGCCCAAGATGcaaatcaaatttcagattCGACCGTGATA
ATCCGAACAACGATGACATATACGCCAAAGCGTGGCGAACACCATGCTCC
AAAGACGTCGAACCTATTTGCAATCAAAGCGTTATAATATCTTGGATGCA
AATGCAGCCTTTCACCAGCGCTCAGATTCTCAATAAAACAGTTTGGCCGA
CCACTGGATTATTACAACAAATCATATCGGTGGCTTTGGCAGAATGCTGT
GGCAACTGTTTGAATATTACGTTCAAATACGTAGAGAATAGGACACAGTT
GATCTCctttgaaaacaaagaagaaagtgACATTATATTGCCGACCTTTA
GTCAAGGACGCCAGTATCAGGTCAATTCAACTCTACCTATGTTGAATATC
CCAGTCATCCAGCTCTCTTCCGCCATGTTTATTATCAAATCATCCATTTC
GGCGACATTGTTTGCACATGAGGTTGTCATGGCGATCATTGATATTTGGC
CATTGCTCGGGGTAGCAATATTGTTATGTTTTGCAGCCGGGGTTGCGATT
TGGATTGTGGATACATGGTGGAATAAAGAACACTTCCCGAGAAGATTTGT
CAGCGGTGCTTTTGAAGgctTTTGGTGGGCGTTTATCAGTATGACGACCG
TGGGTTACGGAGACAGAGTTCCGCGGTCTGTCCCGGGTCGTCTCATATCC
GTATTCTGGATACTTTGCGGAATGACCATATGTGCTTTACTAACTGCCGC
CCTGACAACCGCCATCACCACAGTAGCGGCATCTCAAAGACCAACAGTTA
ATAAAGGGCGGGTTGGTTTATTGAAGGATCGAGTGTTCGAGAAATCGGTT
TTGATGAAAGGTAATGCAGACAAACGATATCAAAACAGTGTGCCAGAGCT
GACGAAAGCTCTCATCGATGGTAGAATAGACGGTCTTCTGCTGGATATCT
ACACAGCTAAATACCATTCAAAAGAAATTACAGACGAGCTTTATGTTGAC
TCTATAGTTACCGATATGGACCAATCATATCTCGGTTTGACCATCTATAG
GGGCGATTTGTATGAGTTAATACTGGAATATATCGAATATCATCGGGATT
ATATTAACGATTTTGTGTTCGATACTTTCCGCTCAATGGAAGAACTTCAA
TCACCAGAGATCGCAGCCAATTTGATTTTTACCACTAAATCTGGCATGTT
TGAACCGATCTTGTATTCTTGTTTAATCATCCTGGGATTGTCCTTACTAA
TAGGTGGAACTTACGAGTTGATACAATatagaaaacgaaagcgattgCAT
CGCAAAAGAACAATCAATAATTTCACgttgaaatctttaaaaaaggaaGA
GAAAATGTTGACAAGCGAActggaagaacttttaaaacgTTGGGACAAAC
ATTTACTAACATTAATGAATACTTACTCTATTGAAGGGATGTTCAAGAAA
TCAAGCACAACTTTCCCTGATATACTAGTCAAATTATCACCCTATAAAAT
AGAGAAAGACTATTCCCCGGATGATGTCATCATTGAACAGGCTGAAGAAG
CAGCGTCAACACATTCTCAGCAAACACCAGTTAAAAAGACTACACCTTCT
AAAAAGAAGCCGTTGAAAAAGAGACCATCTGGTACTAAGAATAATAAAAT
CTCTCCAGAACCTGTCGCGGATTTAGATGATAGCATAGACGGGGGCAGTG
AAGAACAACGAGGGAACGGGTATGTAAAACTACGTGACAACGAATCGAAA
AAGAAACCGCAACGAACTTCAAAAGCAAAACGGACGGGTTCCTCTACTTC
AGGAGGAGGCGTTcgtaaaaaagggaaaaagactaaaaaaGACAGGATGG
TTGACAGTGATAGATCGCATTATGGGACCTACGAGGATCAGGAGAGTAGT
GTACATTTACCAAATACGATGAGGTTGCCACCGTTGAGACATCATAGAGC
TGAAGATATTGTCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000117_pilon | genome | sc0000117_pilon:397028..401695 + |
|
