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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:3174859..3178210- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1419.1.p1 ID=MSTRG.1419.1.p1|Name=MSTRG.1419.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3352bp|location=Sequence derived from alignment at sc0000006_pilon:3174859..3178210- (Clytia hemisphaerica_ch_hm2_pilon)
AGTCTAAGATATAGCTGAAGTGAGAATTGAGAATTGGCCACTCTAATTTG
TTCAACAAATGCTAGTATCGATTTTGAAGGGTGATTATGAAAATCAAAAG
AAATATGGACGAAAGACCTTCGGAGCTTCTTAAAAATGGCGTAGGTATGT
TATTAGTCGGTGTTTTTTTTAGAATGTACCAAACTGACTTTTCGCGAAAT
CTTCTTACCTTTAAAACGGTTTTAAACGGAAACCTATTATTGTTGATGCC
ATGTATTTTCGAATTAAAATTTCCATCCGCACAGAAAAAGCTCTCATCCT
AGATTACTCCTAGTTTTATCCTTGAACTGTAGCTGTTCAACTCATCCAAT
TAAAGCCGGGTTAAAAAATTTGGAACATTTCATTTCATCTCTTTTTCTCA
TGATAAATTGAAATACTCAATTAAAAGTTTTCATTAAGAAAGTTGTCTTA
AATAGGAGATAACCGAAAAAGGCAATTTGGTACAGTCTATAACCACACCC
CTGTCTCAGTGCCCCGATAGAACTTTTTCACTCAGGGGGATGAAAATTGC
TATCAAAATGCCAATGGGGGATAGAAAATCTATTGTTTCCAGCTCGAAAA
TTCCAGTGGGGATGGTTTTGTAGTGCAATTTTTACATTCAGTTTTCAATG
GGGATAAAATCATTGAGCAATTTCGCAGTGGGATTGAAATTGTAGGATAT
TTTTTCCACCGGGGACGATTTTTTGTCCTATTTTTCCACCGGGGTGGAGG
GTCCACCGGGTCTGTGACACAGGGGTGTATAACCTTTTTAACAAGTTTTA
TGTACCCATAAGACTCTCTTCAAGGAAAATTCGGCCTGGATAATACATTG
TTTTGGTATCAAATGATTAAGGTGTGAATTCAGGGACCCTTTTAATAACT
TTTTGAAAAGAATTTCCGAAGCCATAATTCATTTTCGATTTTCCTGTCGT
TTTTTAAAACATTTTGCCATTTAGGATTAATTTCTCTTGTTACGGGAAAG
ATATATGAAGGTGGAAAGTAGCCTTGAATGGTTACATGTTTATTACTAGT
AAAACATCTTCAAAACTAGTACTCTCGGGCACCTAATACACTCTTTTCGA
GATGCATAAATTTATTGTTGTCCTCGTTTTCAAACAGATTTCATTGCTAT
AAAATTACATATTCACAATGATAATTGTGTTGTTTACACCTAATGAGACA
TTTTGAATTTCAAGTACTTTTGTTTTAGAGTTAACGTTTGCTATTTGGGA
ATTTAAATTGGTTTAAATGTATTATTTCATAGCAATGAAATCTGTTTGAA
AAGGAGGACAACAATGAATTTATGCATCTCGAGAAGAGTGTATAGCCGGG
GGGGGGGGTTGGAATAAGCGGGGGGTTTGGAAAAAAATCTCAAAAGTTAA
TAAGCAGGGGAGGGGGTTGGAATAAGGATGTCCTGGGTGGAAAACTTTTG
AACAATTAATTAGCCCCCCCGGTTATTAGGTACCCTAGAGTACTTGCCCT
CTCAAATTAGTAAAGTTTGAAAATGAAAAATAATAGTGATAAAAATGACA
TTCGAATTATATCATTGGATCTATATCATCCTTGAACTATAACACTTCTG
AGTGGGAAGTTTGACAGTTAACTTAGACGAACCCTTTAACTAGAAATCAT
GTTATTCATTGTTAGGTTATTAATTTATAGGTATTCATTCTTTATTGCAT
AGGTGAAAATTTACCCAAATTGAGGCGTGTTTCGACTCGACAAAAAATCC
TTCACAAGAAGAAAGTCGAATATTCTCGTTCGTTCGCCATCCATGGTTTA
TCTCGTGTCTTTCATGGTACTCGAATCGAAAAATTCTTCTGGCTCTTGAA
TCTCGTTTTAAGTTTTGGAATATCAGCATTCTTGATCCGCGGTCAAGTCA
AAAGTTATTTCAACAAGGATATCTATATTGAAGAGCGGAGAATATCGACA
CCAACACCTGAATTTCCAACTGTCACTTTATGCACGGGAGATCCAATCAA
ATACCAGTATTGTAAAAAAGATGCTGCTAAATTCTTACGGCTTTTCCCTG
GGATCAGAGACCCATGCAAACACAAACTTGACATAACTCAAAACGGAATC
ACAACCAATTACCCTCCAGGTGATTTGAAATTTGACATTCCAACCTTCAA
AATCAAATGTGGCGTTAACTGCCATTTTTTCAAAGATATATATGCTTGGC
GTGGTATTTCTAATTATACTAATTGTGTACAATTCAATGGTAATAGACTC
GAGTTATCAACTGATCGGATTGGTTTTAGAATGAGTTTGGCCAAGAATAT
AAAGCAACGGGACTTTCATATGTACATCCACAGTTCTGAAGATACACCTT
ATATTTTAAACCATGGATCTTTTGAAGTCTCGTCTCTTCAAAATACAAAC
CTTCGAATCAAAACTATCAAAACAAAACGATTGGAAGATCCCTTCCCCTC
CAAATGTGTATCGGTGGATGAAGGGAAACGCTTGAATATCTTCCCAGGCA
GATACAGTATCCAAGCTTGCTCTGAAAGCCTGAAATGTATCAAAACTTTT
AAATTATGTGGAGATACTTTTGATTTTTGCCGGAGGTACATCCCTGAAGA
TATTCGCTTAAAATATCAAAATAAAAATGTAAGTATTCAATTAACACATA
TGTGTTTAACGAAGCATATTAAACACAATCTGATTGGGCAATGTCGCCAA
CCATGTGATCAACTGAAATATGACGTTCAAATCTCTCCAAGACCGCACTG
GAAAAAGACTCATGGATATGCCGGACCTGCTGCTCTATTTGTTGAGGAAT
TCGATCTCACTTTCGTTTTGACTGAACCAGGGTCTTTTCTTCAACGCGAG
GAAAAAGAAATGTTCTCGTGGACTGATTTATTGGGTCTTGTAGGTGGCAC
TATTGGTTTGTTTTGTGGTTTCTCATTTTTGTCCTTTCTAGAGTTGATTA
TCTACTTGGCGATCAAAATAATAGTTAAACGTGATGTAGAGGAAGAACAA
GAAACTGAATCGAATAAAGATGACGATTCTCTGATTCTCTGATTCTGTTT
TTATTGAAGTTATAATTGCTCTAAAAGTACACCCTTTCATGGAACCTTAA
AAAAGTTACCTTTTAAAGGGCTGAAAGGACTTGATGGTAATTGGAATCGA
TATACTGCATATGAAATGTGTACAAATAGACTGAAGTGATTTATAATGTA
CATTTTACAGCTTATGATATAGGTGTTGTTAAATGATATTGCTGATGAGA
TTACCGTTTTGGGGTAATCATGCTCTTTCTCTACGATTTATGTTTGAATT
CTCCTTTTTCTTATTTCTTATTTTTATGCCTAAAAATGCATAGGGTAGAG
AA Coding sequence (CDS) from alignment at sc0000006_pilon:3174859..3178210- >MSTRG.1419.1.p1 ID=MSTRG.1419.1.p1|Name=MSTRG.1419.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2796bp|location=Sequence derived from alignment at sc0000006_pilon:3174859..3178210- (Clytia hemisphaerica_ch_hm2_pilon)
GTGAAAATTTACCCAAATTGAGGCGTGTTTCGACTCGACAAAAAATCCTT
CACAAGAAGAAAGTCGAATATTCTCGTTCGTTCGCCATCCATGGTTTATC
TCGTGTCTTTCATGGTACTCGAATCGAAAAATTCTTCTGGCTCTTGAATC
TCGTTTTAAGTTTTGGAATATCAGCATTCTTGATCCGCGGTCAAGTCAAA
AGTTATTTCAACAAGGATATCTATATTGAAGAGCGGAGAATATCGACACC
AACACCTGAATTTCCAACTGTCACTTTATGCACGGGAGATCCAATCAAAT
ACCAGTATTGTAAAAAAGATGCTGCTAAATTCTTACGGCTTTTCCCTGGG
ATCAGAGACCCATGCAAACACAAACTTGACATAACTCAAAACGGAATCAC
AACCAATTACCCTCCAGGTGATTTGAAATTTGACATTCCAACCTTCAAAA
TCAAATGTGGCGTTAACTGCCATTTTTTCAAAGATATATATGCTTGGCGT
GGTATTTCTAATTATACTAATTGTGTACAATTCAATGGTAATAGACTCGA
GTTATCAACTGATCGGATTGGTTTTAGAATGAGTTTGGCCAAGAATATAA
AGCAACGGGACTTTCATATGTACATCCACAGTTCTGAAGATACACCTTAT
ATTTTAAACCATGGATCTTTTGAAGTCTCGTCTCTTCAAAATACAAACCT
TCGAATCAAAACTATCAAAACAAAACGATTGGAAGATCCCTTCCCCTCCA
AATGTGTATCGGTGGATGAAGGGAAACGCTTGAATATCTTCCCAGGCAGA
TACAGTATCCAAGCTTGCTCTGAAAGCCTGAAATGTATCAAAACTTTTAA
ATTATGTGGAGATACTTTTGATTTTTGCCGGAGGTACATCCCTGAAGATA
TTCGCTTAAAATATCAAAATAAAAATGTAAGTATTCAATTAACACATATG
TGTTTAACGAAGCATATTAAACACAATCTGATTGGGCAATGTCGCCAACC
ATGTGATCAACTGAAATATGACGTTCAAATCTCTCCAAGACCGCACTGGA
AAAAGACTCATGGATATGCCGGACCTGCTGCTCTATTTGTTGAGGAATTC
GATCTCACTTTCGTTTTGACTGAACCAGGGTCTTTTCTTCAACGCGAGGA
AAAAGAAATGTTCTCGTGGACTGATTTATTGGGTCTTGTAGGTGGCACTA
TTGGTTTGTTTTGTGGTTTCTCATTTTTGTCCTTTCTAGAGTTGATTATC
TACTTGGCGATCAAAATAATAGTTAAACGTGATGTAGAGGAAGAACAAGA
AACTGAATCGAATAAAGATGACGATTCTCTGATTCTCTGAATGAAAATCA
AAAGAAATATGGACGAAAGACCTTCGGAGCTTCTTAAAAATGGCGTAGGT
GAAAATTTACCCAAATTGAGGCGTGTTTCGACTCGACAAAAAATCCTTCA
CAAGAAGAAAGTCGAATATTCTCGTTCGTTCGCCATCCATGGTTTATCTC
GTGTCTTTCATGGTACTCGAATCGAAAAATTCTTCTGGCTCTTGAATCTC
GTTTTAAGTTTTGGAATATCAGCATTCTTGATCCGCGGTCAAGTCAAAAG
TTATTTCAACAAGGATATCTATATTGAAGAGCGGAGAATATCGACACCAA
CACCTGAATTTCCAACTGTCACTTTATGCACGGGAGATCCAATCAAATAC
CAGTATTGTAAAAAAGATGCTGCTAAATTCTTACGGCTTTTCCCTGGGAT
CAGAGACCCATGCAAACACAAACTTGACATAACTCAAAACGGAATCACAA
CCAATTACCCTCCAGGTGATTTGAAATTTGACATTCCAACCTTCAAAATC
AAATGTGGCGTTAACTGCCATTTTTTCAAAGATATATATGCTTGGCGTGG
TATTTCTAATTATACTAATTGTGTACAATTCAATGGTAATAGACTCGAGT
TATCAACTGATCGGATTGGTTTTAGAATGAGTTTGGCCAAGAATATAAAG
CAACGGGACTTTCATATGTACATCCACAGTTCTGAAGATACACCTTATAT
TTTAAACCATGGATCTTTTGAAGTCTCGTCTCTTCAAAATACAAACCTTC
GAATCAAAACTATCAAAACAAAACGATTGGAAGATCCCTTCCCCTCCAAA
TGTGTATCGGTGGATGAAGGGAAACGCTTGAATATCTTCCCAGGCAGATA
CAGTATCCAAGCTTGCTCTGAAAGCCTGAAATGTATCAAAACTTTTAAAT
TATGTGGAGATACTTTTGATTTTTGCCGGAGGTACATCCCTGAAGATATT
CGCTTAAAATATCAAAATAAAAATGTAAGTATTCAATTAACACATATGTG
TTTAACGAAGCATATTAAACACAATCTGATTGGGCAATGTCGCCAACCAT
GTGATCAACTGAAATATGACGTTCAAATCTCTCCAAGACCGCACTGGAAA
AAGACTCATGGATATGCCGGACCTGCTGCTCTATTTGTTGAGGAATTCGA
TCTCACTTTCGTTTTGACTGAACCAGGGTCTTTTCTTCAACGCGAGGAAA
AAGAAATGTTCTCGTGGACTGATTTATTGGGTCTTGTAGGTGGCACTATT
GGTTTGTTTTGTGGTTTCTCATTTTTGTCCTTTCTAGAGTTGATTATCTA
CTTGGCGATCAAAATAATAGTTAAACGTGATGTAGAGGAAGAACAAGAAA
CTGAATCGAATAAAGATGACGATTCTCTGATTCTCTGAATGAAAATCAAA
AGAAATATGGACGAAAGACCTTCGGAGCTTCTTAAAAATGGCGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:3174859..3178210 - |
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