MSTRG.14185.1.p1 (mRNA) -

Overview
NameMSTRG.14185.1.p1
Unique NameMSTRG.14185.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000117_pilon:347705..349148-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14185.1.p1 ID=MSTRG.14185.1.p1|Name=MSTRG.14185.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1444bp|location=Sequence derived from alignment at sc0000117_pilon:347705..349148- (Clytia hemisphaerica_ch_hm2_pilon)
AGGGTGGTTTCTACGTGGTAGAAATAAGATCGCAGACTTAAAGAAAGGAC
AATAGTTATCATTCCTTATCATTTCAAACTTCAATAATAGAAAGATGACT
TTTTATCACTTTGCTTGATCTTTGACTATATATACTCAATATATTTCTTT
TAGAGAAAATTCAGAATGAAAATATAAAAAGATGAAAAGAATATTCAAAA
CTGCACTCATTTGTTTTGCAATACCACTGACTGCTGTTACAGGTTTGTAT
TCTTAACGTGCTGAGTGTTTCAAAAAAGAAATTATTTTAAGTACTACAAG
TTTGAAATTGGATTCTAAATTTTTCGACCTTAGAAAGAGCATAGACTAAC
TTAAATTCAGAGCTGTTATACAATGAATTCGGTTACACAAAAAGATTTAC
GAGAAAAATTCAATTCGTCAGGTTAATTTTGTTTTGATTTGTTACTTGTC
CATCATTTCTCTTTTCTTTTTCAGTGTACAAACTTCAGCAAAACAAAAAG
CAAGAAGTATGGTCCTTGCAGAAGAAGGAAGAGTCCCGTCTCTTGTATAA
AGCTGGTGGTGCTGTTATTGGTGGTGGACTTGTTATTTTGGCTGGCCCAG
CTGTTTTGTCTGCCTTAGGGTTCACTTCTGCAGGTTAAAGGTTTTGTTAT
TAAATAAGAGTTTAAATATCACACATCATATCATATAGGTAGACACCTTC
CTGATATAAAATATGTGTCTGGTATGAAACGGAAACATTTAACTGAGAAA
TAAAACTTTCTTTAATTTTTGTCAGAAATAAATCAGCAGTTTGTGATTCA
TTGATTTGTCTTATTTTACAGGAATAGCAGCTAGTAGTCTTGCTGCTGGA
ATTCAAAGTGCATTTTATGGTGCTGCGACAACTGGTGCTTTTTCTGTATT
TCAAAGTGCTGGTGTGAGTGGGTTAGGTATTTTTAGTAAGTGTGCTCTTG
GATTGACAGGAGGTATAGCTGGCAATTACCTTGGGGAGATGATGAAAAAG
AAGGAAAAGCCAAAGAAATGGAATGAGTTTGATTTATTTGGATTCCTTAT
TCGTGTAATAAGGTATATTGCATCGTCAATTTATTGTTGATTGCTGTAGC
CATGTTTTTTGTAATTGTGTTTTTTTTACTTTACCATATTTTTGAGTTTT
TATTTTGTAATTAGAATAATAAATTTATGCTTTTGATAGTTTCGTATAAT
TTAGTTTCCTAAATTTTTTTATTTTTCTCAAACATTATAATCCTGATTTT
TGCATTGTACAATTTTCATAATAATTATTCTTTTAGGTAAGAAATAAAAC
GTACATGGAATGATGGGCTTTGGAACACAACCAAAGATAATTACGATTAT
GATCAACATAAAAAATACGAGTAATCTGATTAGCTAAGACCGCCTTCAAA
AATGGGTTCTGGTAAGCTAGAGATCATATTTTTTACAATTTTAC

Coding sequence (CDS) from alignment at sc0000117_pilon:347705..349148-

>MSTRG.14185.1.p1 ID=MSTRG.14185.1.p1|Name=MSTRG.14185.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1467bp|location=Sequence derived from alignment at sc0000117_pilon:347705..349148- (Clytia hemisphaerica_ch_hm2_pilon)
GAATAGCAGCTAGTAGTCTTGCTGCTGGAATTCAAAGTGCATTTTATGGT
GCTGCGACAACTGGTGCTTTTTCTGTATTTCAAAGTGCTGGTGTGAGTGG
GTTAGGTATTTTTAGTAAGTGTGCTCTTGGATTGACAGGAGGTATAGCTG
GCAATTACCTTGGGGAGATGATGAAAAAGAAGGAAAAGCCAAAGAAATGG
AATGAGTTTGATTTATTTGGATTCCTTATTCGTGTAATAAGGTATATTGC
ATCGTCAATTTATTGTTGATGTACAAACTTCAGCAAAACAAAAAGCAAGA
AGTATGGTCCTTGCAGAAGAAGGAAGAGTCCCGTCTCTTGTATAAAGCTG
GTGGTGCTGTTATTGGTGGTGGACTTGTTATTTTGGCTGGCCCAGCTGTT
TTGTCTGCCTTAGGGTTCACTTCTGCAGATGAAAAGAATATTCAAAACTG
CACTCATTTGTTTTGCAATACCACTGACTGCTGTTACAGGAATAGCAGCT
AGTAGTCTTGCTGCTGGAATTCAAAGTGCATTTTATGGTGCTGCGACAAC
TGGTGCTTTTTCTGTATTTCAAAGTGCTGGTGTGAGTGGGTTAGGTATTT
TTAGTAAGTGTGCTCTTGGATTGACAGGAGGTATAGCTGGCAATTACCTT
GGGGAGATGATGAAAAAGAAGGAAAAGCCAAAGAAATGGAATGAGTTTGA
TTTATTTGGATTCCTTATTCGTGTAATAAGGTATATTGCATCGTCAATTT
ATTGTTGATGTACAAACTTCAGCAAAACAAAAAGCAAGAAGTATGGTCCT
TGCAGAAGAAGGAAGAGTCCCGTCTCTTGTATAAAGCTGGTGGTGCTGTT
ATTGGTGGTGGACTTGTTATTTTGGCTGGCCCAGCTGTTTTGTCTGCCTT
AGGGTTCACTTCTGCAGATGAAAAGAATATTCAAAACTGCACTCATTTGT
TTTGCAATACCACTGACTGCTGTTACAGGAATAGCAGCTAGTAGTCTTGC
TGCTGGAATTCAAAGTGCATTTTATGGTGCTGCGACAACTGGTGCTTTTT
CTGTATTTCAAAGTGCTGGTGTGAGTGGGTTAGGTATTTTTAGTAAGTGT
GCTCTTGGATTGACAGGAGGTATAGCTGGCAATTACCTTGGGGAGATGAT
GAAAAAGAAGGAAAAGCCAAAGAAATGGAATGAGTTTGATTTATTTGGAT
TCCTTATTCGTGTAATAAGGTATATTGCATCGTCAATTTATTGTTGATGT
ACAAACTTCAGCAAAACAAAAAGCAAGAAGTATGGTCCTTGCAGAAGAAG
GAAGAGTCCCGTCTCTTGTATAAAGCTGGTGGTGCTGTTATTGGTGGTGG
ACTTGTTATTTTGGCTGGCCCAGCTGTTTTGTCTGCCTTAGGGTTCACTT
CTGCAGATGAAAAGAATATTCAAAACTGCACTCATTTGTTTTGCAATACC
ACTGACTGCTGTTACAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14185MSTRG.14185Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14185.1.p1MSTRG.14185.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14185.1.p1.exon3MSTRG.14185.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14185.1.p1.exon2MSTRG.14185.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14185.1.p1.exon1MSTRG.14185.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000117_pilongenomesc0000117_pilon:347705..349148 -