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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000117_pilon:290091..293541- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14178.1.p1 ID=MSTRG.14178.1.p1|Name=MSTRG.14178.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3451bp|location=Sequence derived from alignment at sc0000117_pilon:290091..293541- (Clytia hemisphaerica_ch_hm2_pilon)
ATCCTTTTGGAAAGTTAGATCTTCAGGATTGATTTCATTGATGAGTTTCA
AAGTAAAAAAACTGTCAGTACTTAATGTTCAGATAGAATTTCTTTACTAG
ATTTATCTGGACTGATTGTAATTATCTTCCTTTCTCGTTCAGTAATCAAA
GGTACATCGCATGCAAATATTGGGACAACGACATGCGGAAAGTTTTCCAC
AAAGGAAGAAAATAATTTGGTTTCGAAAGTATATTACTTTATATTTTGCA
TTACTAATTCCTCGAGTCAAAGCGTACTAGCGAGATTCTTGAACAAACTG
AAGACCATTTTCCCTGACGATTTTTTTAGATTTTCAACTTTAAGACGAGT
CTTAGAAGGAACCACCCCTTAGAATTCCCTAGAGAGGGAGCTTGGATATT
AGTCCTGGCGAGACCTACGACCAAGTCACCTTTCAAGTAAAGCCTATATA
TGCATATTAGGAGGCTAACTCCCCGTACTCGTGATGTTATGGAGGGGAAT
TACTCCTAGAAAATTATTTCAGTCAATCCCTCGAAGATCTCTGGATTTCT
GTCGAAAAGGTGAGCCGAGAAAAAGAGAGTGAAACAGAGGAAGTAAAATC
CAAACCGGAAAAATTGTGAGGTTTCGAAAGAGCTTGAATCTAAGAAAACA
TTTGCACATGTACCTGCACAGCTAGTACCAGGCCTTTTGCATATATAGAT
ATTGTGTTGCTTGGGACTGGTAAAGAAGTTGTAAGCATCCTATATATCGT
GGAGAAACATCATGAGGACTTCACAATTCATCAGAAGAAAATAAGTTGAT
AGAAAAACAAAGATTGGGGACGGAAAAACAAGAGGTAAGGTAATTCCTTT
GGAATTTTGTTTGTCCTGAGAAACAGTAATACTAACAATGAATTAACTTC
AGGTTGAGCATGTTGCGATAGACCACGAGAAATGTGTTCAAACAATATTT
CCTCAAATAATTATGGCACTTATTTTTGGTAACACCACGCTCTTTCACTG
TGGCGCTTATAAAAGGGAAGCGCTTGACAACAAAGAATGAGATCATCAGA
GAATGAAAACAGTCGTGACACTATTCATGGGAGCCATCCTGGCTGAACAA
AGATAGCTTAATCCTTCGTATAAACACTGCATAAATTATCTATTCCAGGA
ATGATGAACGCCGTCACGTTATGTTTGATGCTTTTCATTGCATCAGGCGC
AGGCGTAGACATTGCATATCGACAAACAGACGATTACCAGTTAATATGGT
CTGACAAAGAATCAAAAGGCGACAAAGATGGTTCAATATGGAGAGTGAAA
AATTTCCAGACTGGCTTTTGCTCTTTGGGGGATGTTGCGAAAGGAAGTCA
TAGTCGTCCCAACGTCAAAGCTTTACTCGTCACTGCTAAGAAAGCTGGAG
CATTAGCACACCCCGCCAGTTTTACGAAGATCTGGACAGATAAAGGATCA
GGTGCTGACATGAGTGTCAGTGTATGGAGAATGAACCCTCCTAGAGGATA
CAGGTGTCTTGGGGCTGCAGCCATGCCAAACCACCACCACCATCCCGATG
CATCCAAGTATTGCTGTGTTGGACACCAATACGTCACTTCAGCTGGTGTC
ATCGACGAGTATAATGACAAAGGGTCTGATTCAGATTTGGACGGTGCATT
TTGGAGGGTTGTCCGTAAAGGTGGAGACTCTTCCGGGATCTACGGTGGAA
ACTTCTTGGTTACAACCAACTACCACTCAAGTCCGACCGCAGCTGCTTAC
CTCTTAAAAGCCAGCGACCTAGTGAAAGATGTATGGAGCCTACCCGCTGT
CGCCGTAACACCACTGAACATTTATGAGCAAACCAAATTGGATTTGATTT
GGAGCGACCGTGGCTCAGATGCAGACCACGACTGTACCATATGGAGGGCA
AATAAGCGTAATGGATATTATCCAGTTGGTGATATGGTAGTCCGTACACA
TGGCAGACCCAGAGTGGGCTACCTGGTACAAATGAGTGATCCCGACAGCG
GTGATCTTAAACAACCAATCAGCTATCGTCAGATTTGGAGCGATAAAGGA
TCAGGGGCTGACATGAGTGTGAAAGTATGGCGTGCTAACTGCCCCAGTGG
TTACGTTGCCCTTGGTGATATAGCAACTGGAGGCCATTATCCTAAGGGAG
GTGAAATGTACTGTGTTCGTTCAAAATATGCAGCATACACAGCAGCTTCA
AATTGGCAATGGGTTTGGAATGATAAAGGAAGTGGATCCGATACAGATGT
AACTTTCTTCGAAGCAATAACCCGTGGCAACAGATTATTACAAAGCACGA
GAGGCATGGGTTCTAAAGTGGGTCACCATGGCACGCCACATTATGCACCT
TTCATACTGAAGAAGTCAGACACAACTTATTATGCCGAAAAACCAATTCG
CGAAATCAAGTTGAGGAATATGAGGTAACGTTTATATGAATTTTTTTTTT
TTCAAAAACTTTGAGACAAAGTGTATTGTAACTTTGTGTGTTTCATTTAA
AAAAAAATATTTCATTGGTCTACTTTTCCTTTAGATACGACTTGTCGAAG
AAGAAGATCTCAGGGAAGGCACCACAAGAAATTATCCCGACCGTAGTCAA
CAACATGAGTTCAAAGGAGCAAAAAGGTGGCCGAACAATCGAAGTACAAA
CTTCGAAAACATCATCTTTCGAGATGAGTAGATCAATTTCTTTTGGGCTT
AGTATGGAAGTATCTGGTGATGTCCCAATCATCGGAGGTGGTGGTTTCTC
AGTCACCACGAATTTTGAAACAAGCAAGAGTTATACAACAGGTTAGTTTT
CCATTTTTTCCAAGATTTATATAATGTTCTGAAGAAAGAAAAGGACGCGA
CACATTTTTCTCAAATTATCATCTTGCTCTTTCCCTATCCATTCTCCTGT
GTTCTTTGAAGCTACACAGTCAGTGTTTTTCTCTAGCAAGGTCTCTTAAC
AAAAGATTTTTAATCTAAAAAAAGACTCCCTAGTTACTTTGTCTGTTTCA
ATCAAATAGGAAAGTCGAAGACAGTGACCAAGACAGATTCGGTAACTGCC
GAGATTGTTCTTCCACCATATTCAAGGAGCACTGCTTACATCGTTGGCAA
CCAATACAAAGCGGATATCCCGTACATTGCCACGGTAACCAAGGTCTATT
TTGACGGTACCGAGTCTACTCAAGAAATGAGTGGAGTTTTCAAGGGCGTT
CAAATCGCAGAGTACGAAATTACTTTTGGTGAGATTACAAAAATCCCTGA
GAACGAAAGAAAACCAGTTTTTGGCTAACGGAAGATCTTCAATTTTAATT
TAACAAATTAGATTTAGTATTTTAATTAGAGTGGACCGATTTGTATCTAT
TTTACAATTATTTAGTAGTAATTTGCGAAGACCAATTCCAAAGTAGATAG
TGAATAATTTCAGAAGGGAGAAAAGAACATTATCAATAAATACCATCCTA
A Coding sequence (CDS) from alignment at sc0000117_pilon:290091..293541- >MSTRG.14178.1.p1 ID=MSTRG.14178.1.p1|Name=MSTRG.14178.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5400bp|location=Sequence derived from alignment at sc0000117_pilon:290091..293541- (Clytia hemisphaerica_ch_hm2_pilon)
GAAAGTCGAAGACAGTGACCAAGACAGATTCGGTAACTGCCGAGATTGTT
CTTCCACCATATTCAAGGAGCACTGCTTACATCGTTGGCAACCAATACAA
AGCGGATATCCCGTACATTGCCACGGTAACCAAGGTCTATTTTGACGGTA
CCGAGTCTACTCAAGAAATGAGTGGAGTTTTCAAGGGCGTTCAAATCGCA
GAGTACGAAATTACTTTTGGTGAGATTACAAAAATCCCTGAGAACGAAAG
AAAACCAGTTTTTGGCTAAATACGACTTGTCGAAGAAGAAGATCTCAGGG
AAGGCACCACAAGAAATTATCCCGACCGTAGTCAACAACATGAGTTCAAA
GGAGCAAAAAGGTGGCCGAACAATCGAAGTACAAACTTCGAAAACATCAT
CTTTCGAGATGAGTAGATCAATTTCTTTTGGGCTTAGTATGGAAGTATCT
GGTGATGTCCCAATCATCGGAGGTGGTGGTTTCTCAGTCACCACGAATTT
TGAAACAAGCAAGAGTTATACAACAGATGATGAACGCCGTCACGTTATGT
TTGATGCTTTTCATTGCATCAGGCGCAGGCGTAGACATTGCATATCGACA
AACAGACGATTACCAGTTAATATGGTCTGACAAAGAATCAAAAGGCGACA
AAGATGGTTCAATATGGAGAGTGAAAAATTTCCAGACTGGCTTTTGCTCT
TTGGGGGATGTTGCGAAAGGAAGTCATAGTCGTCCCAACGTCAAAGCTTT
ACTCGTCACTGCTAAGAAAGCTGGAGCATTAGCACACCCCGCCAGTTTTA
CGAAGATCTGGACAGATAAAGGATCAGGTGCTGACATGAGTGTCAGTGTA
TGGAGAATGAACCCTCCTAGAGGATACAGGTGTCTTGGGGCTGCAGCCAT
GCCAAACCACCACCACCATCCCGATGCATCCAAGTATTGCTGTGTTGGAC
ACCAATACGTCACTTCAGCTGGTGTCATCGACGAGTATAATGACAAAGGG
TCTGATTCAGATTTGGACGGTGCATTTTGGAGGGTTGTCCGTAAAGGTGG
AGACTCTTCCGGGATCTACGGTGGAAACTTCTTGGTTACAACCAACTACC
ACTCAAGTCCGACCGCAGCTGCTTACCTCTTAAAAGCCAGCGACCTAGTG
AAAGATGTATGGAGCCTACCCGCTGTCGCCGTAACACCACTGAACATTTA
TGAGCAAACCAAATTGGATTTGATTTGGAGCGACCGTGGCTCAGATGCAG
ACCACGACTGTACCATATGGAGGGCAAATAAGCGTAATGGATATTATCCA
GTTGGTGATATGGTAGTCCGTACACATGGCAGACCCAGAGTGGGCTACCT
GGTACAAATGAGTGATCCCGACAGCGGTGATCTTAAACAACCAATCAGCT
ATCGTCAGATTTGGAGCGATAAAGGATCAGGGGCTGACATGAGTGTGAAA
GTATGGCGTGCTAACTGCCCCAGTGGTTACGTTGCCCTTGGTGATATAGC
AACTGGAGGCCATTATCCTAAGGGAGGTGAAATGTACTGTGTTCGTTCAA
AATATGCAGCATACACAGCAGCTTCAAATTGGCAATGGGTTTGGAATGAT
AAAGGAAGTGGATCCGATACAGATGTAACTTTCTTCGAAGCAATAACCCG
TGGCAACAGATTATTACAAAGCACGAGAGGCATGGGTTCTAAAGTGGGTC
ACCATGGCACGCCACATTATGCACCTTTCATACTGAAGAAGTCAGACACA
ACTTATTATGCCGAAAAACCAATTCGCGAAATCAAGTTGAGGAATATGAG
GAAAGTCGAAGACAGTGACCAAGACAGATTCGGTAACTGCCGAGATTGTT
CTTCCACCATATTCAAGGAGCACTGCTTACATCGTTGGCAACCAATACAA
AGCGGATATCCCGTACATTGCCACGGTAACCAAGGTCTATTTTGACGGTA
CCGAGTCTACTCAAGAAATGAGTGGAGTTTTCAAGGGCGTTCAAATCGCA
GAGTACGAAATTACTTTTGGTGAGATTACAAAAATCCCTGAGAACGAAAG
AAAACCAGTTTTTGGCTAAATACGACTTGTCGAAGAAGAAGATCTCAGGG
AAGGCACCACAAGAAATTATCCCGACCGTAGTCAACAACATGAGTTCAAA
GGAGCAAAAAGGTGGCCGAACAATCGAAGTACAAACTTCGAAAACATCAT
CTTTCGAGATGAGTAGATCAATTTCTTTTGGGCTTAGTATGGAAGTATCT
GGTGATGTCCCAATCATCGGAGGTGGTGGTTTCTCAGTCACCACGAATTT
TGAAACAAGCAAGAGTTATACAACAGATGATGAACGCCGTCACGTTATGT
TTGATGCTTTTCATTGCATCAGGCGCAGGCGTAGACATTGCATATCGACA
AACAGACGATTACCAGTTAATATGGTCTGACAAAGAATCAAAAGGCGACA
AAGATGGTTCAATATGGAGAGTGAAAAATTTCCAGACTGGCTTTTGCTCT
TTGGGGGATGTTGCGAAAGGAAGTCATAGTCGTCCCAACGTCAAAGCTTT
ACTCGTCACTGCTAAGAAAGCTGGAGCATTAGCACACCCCGCCAGTTTTA
CGAAGATCTGGACAGATAAAGGATCAGGTGCTGACATGAGTGTCAGTGTA
TGGAGAATGAACCCTCCTAGAGGATACAGGTGTCTTGGGGCTGCAGCCAT
GCCAAACCACCACCACCATCCCGATGCATCCAAGTATTGCTGTGTTGGAC
ACCAATACGTCACTTCAGCTGGTGTCATCGACGAGTATAATGACAAAGGG
TCTGATTCAGATTTGGACGGTGCATTTTGGAGGGTTGTCCGTAAAGGTGG
AGACTCTTCCGGGATCTACGGTGGAAACTTCTTGGTTACAACCAACTACC
ACTCAAGTCCGACCGCAGCTGCTTACCTCTTAAAAGCCAGCGACCTAGTG
AAAGATGTATGGAGCCTACCCGCTGTCGCCGTAACACCACTGAACATTTA
TGAGCAAACCAAATTGGATTTGATTTGGAGCGACCGTGGCTCAGATGCAG
ACCACGACTGTACCATATGGAGGGCAAATAAGCGTAATGGATATTATCCA
GTTGGTGATATGGTAGTCCGTACACATGGCAGACCCAGAGTGGGCTACCT
GGTACAAATGAGTGATCCCGACAGCGGTGATCTTAAACAACCAATCAGCT
ATCGTCAGATTTGGAGCGATAAAGGATCAGGGGCTGACATGAGTGTGAAA
GTATGGCGTGCTAACTGCCCCAGTGGTTACGTTGCCCTTGGTGATATAGC
AACTGGAGGCCATTATCCTAAGGGAGGTGAAATGTACTGTGTTCGTTCAA
AATATGCAGCATACACAGCAGCTTCAAATTGGCAATGGGTTTGGAATGAT
AAAGGAAGTGGATCCGATACAGATGTAACTTTCTTCGAAGCAATAACCCG
TGGCAACAGATTATTACAAAGCACGAGAGGCATGGGTTCTAAAGTGGGTC
ACCATGGCACGCCACATTATGCACCTTTCATACTGAAGAAGTCAGACACA
ACTTATTATGCCGAAAAACCAATTCGCGAAATCAAGTTGAGGAATATGAG
GAAAGTCGAAGACAGTGACCAAGACAGATTCGGTAACTGCCGAGATTGTT
CTTCCACCATATTCAAGGAGCACTGCTTACATCGTTGGCAACCAATACAA
AGCGGATATCCCGTACATTGCCACGGTAACCAAGGTCTATTTTGACGGTA
CCGAGTCTACTCAAGAAATGAGTGGAGTTTTCAAGGGCGTTCAAATCGCA
GAGTACGAAATTACTTTTGGTGAGATTACAAAAATCCCTGAGAACGAAAG
AAAACCAGTTTTTGGCTAAATACGACTTGTCGAAGAAGAAGATCTCAGGG
AAGGCACCACAAGAAATTATCCCGACCGTAGTCAACAACATGAGTTCAAA
GGAGCAAAAAGGTGGCCGAACAATCGAAGTACAAACTTCGAAAACATCAT
CTTTCGAGATGAGTAGATCAATTTCTTTTGGGCTTAGTATGGAAGTATCT
GGTGATGTCCCAATCATCGGAGGTGGTGGTTTCTCAGTCACCACGAATTT
TGAAACAAGCAAGAGTTATACAACAGATGATGAACGCCGTCACGTTATGT
TTGATGCTTTTCATTGCATCAGGCGCAGGCGTAGACATTGCATATCGACA
AACAGACGATTACCAGTTAATATGGTCTGACAAAGAATCAAAAGGCGACA
AAGATGGTTCAATATGGAGAGTGAAAAATTTCCAGACTGGCTTTTGCTCT
TTGGGGGATGTTGCGAAAGGAAGTCATAGTCGTCCCAACGTCAAAGCTTT
ACTCGTCACTGCTAAGAAAGCTGGAGCATTAGCACACCCCGCCAGTTTTA
CGAAGATCTGGACAGATAAAGGATCAGGTGCTGACATGAGTGTCAGTGTA
TGGAGAATGAACCCTCCTAGAGGATACAGGTGTCTTGGGGCTGCAGCCAT
GCCAAACCACCACCACCATCCCGATGCATCCAAGTATTGCTGTGTTGGAC
ACCAATACGTCACTTCAGCTGGTGTCATCGACGAGTATAATGACAAAGGG
TCTGATTCAGATTTGGACGGTGCATTTTGGAGGGTTGTCCGTAAAGGTGG
AGACTCTTCCGGGATCTACGGTGGAAACTTCTTGGTTACAACCAACTACC
ACTCAAGTCCGACCGCAGCTGCTTACCTCTTAAAAGCCAGCGACCTAGTG
AAAGATGTATGGAGCCTACCCGCTGTCGCCGTAACACCACTGAACATTTA
TGAGCAAACCAAATTGGATTTGATTTGGAGCGACCGTGGCTCAGATGCAG
ACCACGACTGTACCATATGGAGGGCAAATAAGCGTAATGGATATTATCCA
GTTGGTGATATGGTAGTCCGTACACATGGCAGACCCAGAGTGGGCTACCT
GGTACAAATGAGTGATCCCGACAGCGGTGATCTTAAACAACCAATCAGCT
ATCGTCAGATTTGGAGCGATAAAGGATCAGGGGCTGACATGAGTGTGAAA
GTATGGCGTGCTAACTGCCCCAGTGGTTACGTTGCCCTTGGTGATATAGC
AACTGGAGGCCATTATCCTAAGGGAGGTGAAATGTACTGTGTTCGTTCAA
AATATGCAGCATACACAGCAGCTTCAAATTGGCAATGGGTTTGGAATGAT
AAAGGAAGTGGATCCGATACAGATGTAACTTTCTTCGAAGCAATAACCCG
TGGCAACAGATTATTACAAAGCACGAGAGGCATGGGTTCTAAAGTGGGTC
ACCATGGCACGCCACATTATGCACCTTTCATACTGAAGAAGTCAGACACA
ACTTATTATGCCGAAAAACCAATTCGCGAAATCAAGTTGAGGAATATGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000117_pilon | genome | sc0000117_pilon:290091..293541 - |
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