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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000116_pilon:920231..922866+ Legend: exonthree_prime_UTRpolypeptideCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14139.1.p3 ID=MSTRG.14139.1.p3|Name=MSTRG.14139.1.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2636bp|location=Sequence derived from alignment at sc0000116_pilon:920231..922866+ (Clytia hemisphaerica_ch_hm2_pilon)
AGGCTGATGGGGATGTCTACCACAGTGAAAACCACCCACACACTCTGCCA
GTAGAAACCCCGGGGACCCGAGAGGCAATGAATTCCTATGCCAAACGTCG
CCGCAAACGTGTTGCTGAGAAGGCTGCTGATTCCTTGGGTGCAGACGATA
CAGGTTTCTCTGACATGGTCGTTGAAGGACATAACCCACCCGCTGAAGGA
GAGAAGTCGTGCCACAGACTCACTTTGGTTGAGGTTGCAGACTTTTGCAT
TCAACAATCCATCAAGGCCCGGAAGGCGGTTCAAAGGGACGGAAAACTTG
ACTTGTACCATTTCATTTTGGATCAGCTCAAACAACTTGTGGAAGACCTT
ATCGACAATGTTTGGGAGATGAAAAATTCAGTCGATATGGATTCTGAAAT
GGGGGCACGTGACCGAATGCATGTCCTGTATGATTTGTCCAACTCCCCCT
GTGTCCCAGGATGTGAAGACGAGCTGAGGAAAAGATCTGCCTTGCAGATC
CTGGAATACAACAACATAGATTGGGCCACCTTTGCAGATGCTGTGAAACC
TTTGCTTCGACGTGGAAGGGACAAGTACAGAAATGTTATGCTTTACGGGG
ACGTCAACTGTGcgaaaacttttctactcaagcCGCTCACACACATCTAC
AAGACTTTTGAGAACCAAGTCAGCGATAAGTACTCTTGGGTTGGAAGTTA
CAGAAGTTATTTTGATCAATGACCTTAGTTGGAAGCACCCGGGGGAGCAA
ATCTCATGGGATGACTTCCTAAGACTCCTTGAAGGGGAGCCCACCAAATT
GCCCGCCCCTAAAAACCACTTTGCCAAGGACGTACTGATAGACAAAGTTA
CCCCTTTTTCTGCCACTGGACCATACCGCCTCAGAAAAAACAAGGAGCCA
CCAGAGGCAAGGGAGAACCGAATGATGGATGTCAAGTGGAGATACTTTGA
GTTCTACAGGAGGTTGACGGGTGAGGAAGTAAACAACAGTATCCCACCCT
GCCCAAGATGTTTTGCTGAGTTTGTTTTGCACCATGCATAATTTAAATAT
CAAAAGGactatagttttttttttctggttaTCCGTTATCTAGAGTTGGG
TCACAAAATACATATTTAGTTACTTAGTGTTACAAGTGTTacaagaaaat
taaattattaaccaaactttttttttactttgtaacaCTGTAACACAATG
TTATTCAATAACTGGAAATTTTCAGGGTTATAAATGATAGGGAGGTGAGG
TCCAGAACTGTCGCTCAACACAATTGTGGACAATattccttttttaattt
ttaattttatcattatttatttaCAGACTTGTAACATAGTCCTAAAGTAC
ATACACATGGATAGGAAGTAAAAACTAATACTTTGTGCGTTGACCTCTGC
GCTTGATAATCCTCTCCTTTCTTTGTGGCATTGACTCTATAGTGCACCGG
ATGACATCCTTGTTGTAGTTGAGAAGGGTACGCTTACATCGGGCAATGCT
TCCTTCACTCCTTTGAATACGTTCTCTATTGGGTTGAGATCTGGTGTTCT
GTGAGGAGTCTTGAACACTTCTGCTCCAATCGACACTAAAGCTTCTCTTG
ATCGTTTGGAATTTTGGGTGGGACAGTTATCctgcaaaaacatttttccg
cCCGCGTTAGAGCTTCCGATAATGCACCCAGAGTGGTTTTCACGAAATCA
GCAAATTTGTTGCCATTTAGCCGGCACTGATACTGTTTAGCGCAAATCAT
TCCATCGTGGTGAAACAGCACATATGAAGTGGGCAACCTGCCCGCCAGTT
CCCTCGTGGGGCCCTCCAGCGGTCCAATCCAATCCGTCTTGTGGTCTGCG
CCATGCCATTGTCCAGGGTGCCTTTGCCTAATCAAAGGGGTTGTATTTAT
GAGCAAAACCAACACCGTCCAGGTAGAACGCAATGTCTCTCAGCCAGAGT
TGAAGCTGTCCTTCTTGGCCGAGGCGTCTGATTCTTTGAGCAAATTCCAA
TCGAGCACGCAGATCTTTTCGTTTAAGGACACCTTTTTTCAGGAAATGAG
TGTACCGTAACCCGGCcttgcaaaaaacttttcgaaCTGTCTCATCACAT
ACGTTTTGTACTCCAGCTGCAGTCTTGACACGTTTGATAGTGAGGTGATC
TTGGCTTTCACGCAGCTGCTCAGCAATCCGTGGGATTCTGCGTTCATCCT
TTGAGGTTAGAGCTTTGGGGCGTCCTTTATTAAGTGTGCGTCGGTCTAGA
AATTCTTCACCGATGGGTCGTTTCATGTGGCGCGTCACTGTAGCTCGGGA
ATAACGGTGACGTTATTGTGGCAGTAGTCGGATTTCGTCTAGTGACTTTC
CAGTCCTGGTGTAAATGCCGCCAGTAGATTGATACCCCATGTGGTACATA
TTTACGGGATCGGACCATATTGTCAatgtaatttttaattatctttcTAT
ATGTTAttgcatagaggtataaagaaaaacaagagtccaatttgtcggta
attggtcgttaaagtcttttgatttcttttataaaatgtttcaaaagaaa
ttctaagctcgcccgatgaaataagactttttagtagaactcaagtttga
tcTTAACATTCTAATtttcagtattgaagattctag Coding sequence (CDS) from alignment at sc0000116_pilon:920231..922866+ >MSTRG.14139.1.p3 ID=MSTRG.14139.1.p3|Name=MSTRG.14139.1.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=399bp|location=Sequence derived from alignment at sc0000116_pilon:920231..922866+ (Clytia hemisphaerica_ch_hm2_pilon)
CTAATCAAAGGGGTTGTATTTATGAGCAAAACCAACACCGTCCAGGTAGA
ACGCAATGTCTCTCAGCCAGAGTTGAAGCTGTCCTTCTTGGCCGAGGCGT
CTGATTCTTTGAGCAAATTCCAATCGAGCACGCAGATCTTTTCGTTTAAG
GACACCTTTTTTCAGGAAATGAGTGTACCGTAACCCGGCcttgcaaaaaa
cttttcgaaCTGTCTCATCACATACGTTTTGTACTCCAGCTGCAGTCTTG
ACACGTTTGATAGTGAGGTGATCTTGGCTTTCACGCAGCTGCTCAGCAAT
CCGTGGGATTCTGCGTTCATCCTTTGAGGTTAGAGCTTTGGGGCGTCCTT
TATTAAGTGTGCGTCGGTCTAGAAATTCTTCACCGATGGGTCGTTTCAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000116_pilon | genome | sc0000116_pilon:920231..922866 + |
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