MSTRG.14137.2.p1 (mRNA) -

Overview
NameMSTRG.14137.2.p1
Unique NameMSTRG.14137.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000116_pilon:876099..879159-

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14137.2.p1 ID=MSTRG.14137.2.p1|Name=MSTRG.14137.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3061bp|location=Sequence derived from alignment at sc0000116_pilon:876099..879159- (Clytia hemisphaerica_ch_hm2_pilon)
TTGACTCTTTTTTCAGGTGTTATTCATTCGTCGGGCGTATTGGCGGTGCA CAACGCCTGAACATGGGCGAAGGGTGCAACTCAGTAGCGATTGCAATACA TGAGCTGATGCACGCTCTTTCTTTTGTACACGAACACAATCGAAATGATC GAGACAAATATGTCATCGTTAAATTGGAAAACATTTTGTCGGGTAAGAAA GTCAAATATTTTTTCAGTATTTCTATTAATATTGTACGCTGGAAATTGGT TTACAACCTTGGTTTACAAACCCAATGCCTAACCCGAACTGATAATAACC GAACCCCCGTCTAAAAAGTCTGTCCAGATATAATTGGCAGTGGAAACAAG AATGCCTGTAACTTTTGATAGTCAAATATAATTATAGATAGGTTAAGAAG TCTCTTAAATTTCAAGGCAAACAGAAAAGTCCTTCGGAAGATATGGGATC CGAAATACCCCTTGGTAGCACTTTTCTGTGAAATATCAAATCTCCAACTT ATTACTAAAAACGGGGGTAGTGATATGATTGATAAAACAGTTTTTCGATC ATAATACATTTTACGATCTTTTTAATGACCTCATAGCCAAGCTGTGTTTA GTGTTTTGGGAATTAGCAAAGTTCTTTAATGACTTAAAAATAACAAAGGC AATATAAGTTCACGCTTATCTTTTCAATAAAAGCAATTATACTGTGATTT CACTTCGTTTCGAAATAATCAATGATACCAATACCCTACCAATAATACCA ATGAACCAACACTTAACATTTTCCAACTTTTAATTGCACTGTTCAAAAAA GATAACATATAACCCCCGTTTTTAATAATAAGTTCGAGATTTGATATTTC ACAGAAAAGTGCTACCAAGGGGTATTTCCACAGATATCTGTAAAGCCCGA AGGGCTAGATTTGCAGCTTTGTTCAAAAAGTGAAGCTCATCTTTGGAAGG ATTTCCTACCAGAGTCACGTGACTAAAATATGCAATTTCACCGGTTTGAG AGATGTGAAATAGCGTTTGCCGCCTAATTTTTTTGATATCGCGCTCCGAA AACAATCAAAATGCTAGATCCTATCCATCGGCACGAAATTTAAAAAGTCA AATTTTAGCTTCACTTTTTTTTGCTGGAGAAAGCTTAAAGTTGCCTATCT AGCCCTTCGGGCTTAGATATCTGTGGGTATTTCAGGTCCCATATCTTCTG AAGGACTTTTCTGTTTTCCTTGAAATTTAAGAGACTTCTTAACGTAAGGT TGAACTACCACTAATGTAAAAATTAACGTTATAGCATAAGTAGAAAAAAA GCTCAATTTTTGCAATCGCAAATTTAACCACTAAAAATCGCGAATTTTTC AACCAAAAATACATTCAAATATAGCGCTTTTGATTCTCCAAAACAAGCAA AAAAAATTTCTATAAATATATTTGACTATCAAAAGTTACAGGCATTCTTG TTTCCACTGCCAATTATATCTGGACAGACTTTAGTTCCATAGATTGAAAA ATTTCACTTGCATATTGACGGGTGATATCGTCTGCCAACCGCTGGAAATC ACCAGTTTACAAACGAGAGGCAAGCATTGTTCTACTTTGGCATTATATAG TTTTGTATTGACTAAAGATAACTGGATTATGTTTCTTCTTCAGGGGCCGA AAAGTCTTTTGACAAATACAAAGATTTTGAAATCGATGTTTTGGAAACTC CTTTTGACAAGCAAAGTGTGATGCACTATTCAAAGTGAGTGATTTGGCAC GTGTGTAATTTGGCTAAAATTTTGTACTGTTACGTTGTAAAAAGATGATT CATTAATATAATTTTTGAACAATAAACTACTTTCAGGGGGTAAACCCTTG AGTATCACAGTGTAAATATTACACTGTGACGACAAATCAAGAATCTATTT ATAAGCACGTTCAATAAATACAATAGGTTATGTGCTTTCAATCTTCGATT CTTTGAAAAGTAATACGATACTCGATAAAATTCTGTCTCTATAGGTTAAG TTTTAGAGAAATCTAAAATGTTCTCTCACGGTATCTAAATTTCCCGTAAA TAAAGGATCTTGTAGAAACATTTATAGTTTGTGGTTGACCAATGTTCAAG GCCGTTATTGTAATAAACTGACAGCTCCTAGTCCAAAGTCCTGCTCTTTC TGTATTTCGTTCAGTTCAAACCCAGGGGAAGGGTAGAAATGGGTGCCGGG TATGTGCGAGCCGGGTCCCTTTTTCACACCCTCGAAAGTCTCTCAAAGGA GTACAAAAACCATTAAAAAGAGAATTGAGTCTCTGCAAGGGTCCAAAAAT CTCTCGAAGGGTCGTGTCCAAAATTTGGACAAAAATTGAGTGAAAATCGA TAAAAGATTTGAGAAAAGTCTCTCATAGGGTCCCAAAAACACCAATTTTT TACAATGACTTTGTTTTCAATTCTTTCCAGCTTTGCATTCACCAATAAGA ATCCTTTTGATGGTGAATCAGCAATGACTTTGATCAGTAAAGGACCATTG GGTGCAAATGAAGTTCTTGGGAACTCAGAGGGGTTGAGTTCTCTTGATAT ACAGCGTATCGACACCAGGTATGTTTTACACTAAGCATGTAGGTAAATTT TAATAGCGTTGATTAGTAGTTGATAATTGAAATATCTCGAATTGTGCTCG ACTTTGATCCATTGATGTTCGTTTCCATTCGGTTCCTTTGGAAATAAATC CCACCTTTAAACTTTTTTTAAGATACTGCCAAGGTGTTACAGCGCAAACT AAAACTCCAACACAAACTCCACCAGTGACTGAACAGCAGACAGAAAACCC TGAAACAACCACCACCGAAGATCCACAAGTTACCACCAATCCTGTTACCA AAAATCCCTTGACTGAAAACCCCGTTACTGATGGCGTCACAATGGAACCT TTGACTGAGACACCGGAGCCGTTGACCAAAACAGCCGGACCAACTGAAAT TCCGCCTAAAACATCTTGTCCTACAAAACGACCCAAAGAAAAGCGATGGA AAAAGAAAGGCTCGTGGTGGAAACGTATAACTCGTAAATGGTGGCAAGGG CGAGGGCGTGG

Coding sequence (CDS) from alignment at sc0000116_pilon:876099..879159-

>MSTRG.14137.2.p1 ID=MSTRG.14137.2.p1|Name=MSTRG.14137.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1752bp|location=Sequence derived from alignment at sc0000116_pilon:876099..879159- (Clytia hemisphaerica_ch_hm2_pilon)
GTGTTACAGCGCAAACTAACTTTGCATTCACCAATAAGAATCCTTTTGAT
GGTGAATCAGCAATGACTTTGATCAGTAAAGGACCATTGGGTGCAAATGA
AGTTCTTGGGAACTCAGAGGGGTTGAGTTCTCTTGATATACAGCGTATCG
ACACCAGGGGCCGAAAAGTCTTTTGACAAATACAAAGATTTTGAAATCGA
TGTTTTGGAAACTCCTTTTGACAAGCAAAGTGTGATGCACTATTCAAAGA
CTCTTTTTTCAGGTGTTATTCATTCGTCGGGCGTATTGGCGGTGCACAAC
GCCTGAACATGGGCGAAGGGTGCAACTCAGTAGCGATTGCAATACATGAG
CTGATGCACGCTCTTTCTTTTGTACACGAACACAATCGAAATGATCGAGA
CAAATATGTCATCGTTAAATTGGAAAACATTTTGTCGGGTGTTACAGCGC
AAACTAACTTTGCATTCACCAATAAGAATCCTTTTGATGGTGAATCAGCA
ATGACTTTGATCAGTAAAGGACCATTGGGTGCAAATGAAGTTCTTGGGAA
CTCAGAGGGGTTGAGTTCTCTTGATATACAGCGTATCGACACCAGGGGCC
GAAAAGTCTTTTGACAAATACAAAGATTTTGAAATCGATGTTTTGGAAAC
TCCTTTTGACAAGCAAAGTGTGATGCACTATTCAAAGACTCTTTTTTCAG
GTGTTATTCATTCGTCGGGCGTATTGGCGGTGCACAACGCCTGAACATGG
GCGAAGGGTGCAACTCAGTAGCGATTGCAATACATGAGCTGATGCACGCT
CTTTCTTTTGTACACGAACACAATCGAAATGATCGAGACAAATATGTCAT
CGTTAAATTGGAAAACATTTTGTCGGGTGTTACAGCGCAAACTAACTTTG
CATTCACCAATAAGAATCCTTTTGATGGTGAATCAGCAATGACTTTGATC
AGTAAAGGACCATTGGGTGCAAATGAAGTTCTTGGGAACTCAGAGGGGTT
GAGTTCTCTTGATATACAGCGTATCGACACCAGGGGCCGAAAAGTCTTTT
GACAAATACAAAGATTTTGAAATCGATGTTTTGGAAACTCCTTTTGACAA
GCAAAGTGTGATGCACTATTCAAAGACTCTTTTTTCAGGTGTTATTCATT
CGTCGGGCGTATTGGCGGTGCACAACGCCTGAACATGGGCGAAGGGTGCA
ACTCAGTAGCGATTGCAATACATGAGCTGATGCACGCTCTTTCTTTTGTA
CACGAACACAATCGAAATGATCGAGACAAATATGTCATCGTTAAATTGGA
AAACATTTTGTCGGGTGTTACAGCGCAAACTAACTTTGCATTCACCAATA
AGAATCCTTTTGATGGTGAATCAGCAATGACTTTGATCAGTAAAGGACCA
TTGGGTGCAAATGAAGTTCTTGGGAACTCAGAGGGGTTGAGTTCTCTTGA
TATACAGCGTATCGACACCAGGGGCCGAAAAGTCTTTTGACAAATACAAA
GATTTTGAAATCGATGTTTTGGAAACTCCTTTTGACAAGCAAAGTGTGAT
GCACTATTCAAAGACTCTTTTTTCAGGTGTTATTCATTCGTCGGGCGTAT
TGGCGGTGCACAACGCCTGAACATGGGCGAAGGGTGCAACTCAGTAGCGA
TTGCAATACATGAGCTGATGCACGCTCTTTCTTTTGTACACGAACACAAT
CGAAATGATCGAGACAAATATGTCATCGTTAAATTGGAAAACATTTTGTC
GG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14137MSTRG.14137Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14137.2.p1MSTRG.14137.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14137.2.p1.exon4MSTRG.14137.2.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14137.2.p1.exon3MSTRG.14137.2.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14137.2.p1.exon2MSTRG.14137.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14137.2.p1.exon1MSTRG.14137.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000116_pilongenomesc0000116_pilon:876099..879159 -