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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000116_pilon:784198..787669- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14128.1.p1 ID=MSTRG.14128.1.p1|Name=MSTRG.14128.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3472bp|location=Sequence derived from alignment at sc0000116_pilon:784198..787669- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTAATATCTACTGTTTTTTCTATTTGCAAGTTTCTTTAAAAAAATAAA
ATGGCATCACAATTGAATTTACAACAGAAAATCAATGCATTGAAATCGAA
GAATATCAATCCATCAAAATGCACCAAACGAACATCATTGTATAATCAAA
TAGTGACAAATGCACAGTCTACCATTGACAACCAAAACCGCAAGTTCAAC
CTCGGGAATGGTCAGTTATTTAACGACCCTATTCTTGCCGCTGATCAGCT
TCTCTTTAGAGAATATGCTGATTCAGCATTATTCAACACCAACCGCCACG
ATCCTGTATTTATTCCCCCGGTTTTTCAATCACACCAATACGCGAAGAAG
GATTCAACCGTGCATCTCCTTGATTACGATGTTGACATAAACACTCTCAA
GAAATGTTTGGATAATTTGAAGAAGGATTCGCCAGACCATTGGTTCACAC
GTGAGCTCCAATATTTCCATTATCTCCATTGGTTAACAAAGGGACCTCAA
GCTTTCTCTGAATTGCAGGAAAACAAAACTGACAAGGAAATCAATGGAAA
AGAATTCAGCAATTGGATTCTTAATCTAAAGATCAAGTATCTAATGGTCA
AAGAGTTGGCAACAGTTAATATGACTCTACCATCAACAACTGAGGACAAA
AACACATTCATCCAAGCATGTATTCAGGAATTGGCTTCAAAATCACCAAG
ATCAAAATTGGAACAAACTCTCAAAAAGGTAACATATCAATTATTTGTTT
CTCGAAATTTATAAAAATCCTTCTTGTAGTGTAACAAAGGACATCTGAAG
CTAATCGTGATTATTATTGTCAATTGTCTTGTGTTGAATCTTTTCGGATG
TTTACTCCATGCAGGCAGTACTGAGCCTCTCTTTGAATACTTTGTGACTG
GTTTTGCCTCAGCGACAATTTTTGGCAGTTTATTCCAGGTTGGTATAGTT
CAGTAAAAGAAGGAATCAACGGAATCCATCGCTTTCAAAGAGTAAAGTTG
TTTTTAATCCCTAATTTCATTTACAGACGTTAAAAGACGTTAAAAAAGAA
GTCGAAAACTTGGTCAATCAAAACCCACCATCTCATCCAACAATAAAACG
GCTTTTCGAATTAGTTCTATCGGAGCTCGGTGAAAAAGGCGAACGCTCGT
TTTTCGAAAAACTCTATTCGATCAAAGATGACCCTGTTCTTGAAGATACT
GTGATTCTCAGTTCCATCAACTTTCTCACCAATGTCCAAAAGAAAATGCA
TCAGGAGATTGACGTCCTTCTTTACTCGTGGGCCAAGAAATTAATCATAG
GCGTTGAAATCAAACGGACACTGACTATAAAAGCTTTTGACCAGTTGGAT
AAATACCATAAATTGATAGAGGAGAGATTGAGTGATCAATTGGGACAAGG
CTGGACGTATCATCCAGTCATTTTTGTTGAGAAGGACAACCTGTTCTTCA
ACAATCAACATTACATTGACCAAGAAGCAGATTTGAAATGTTGGTTATCC
AACTTGCTTGCGAAATATCCGACCGTTCCCTCTGGAATCATTCCACCAGT
AAATCAAGTTAAAGACCTCCTAAGAATTGTTGTGTTTGCCATTCATGCTT
CAAAAACAGCACCCATTACGACATCGAACTGGGTAGAGTATATCTCAAAA
GCCATAGATACCGTCTGCACTACTGACAACATACTCTTTTACAGTCAGCG
TCAACTTCCCATCATGAAGACAGACACTTCTGAATTCAATAAGATCCTCT
TTTGTGCTCCGTATGGATGCGGAAAATCCTTCATCCTTCAGGAGAAAGCA
AAACAATTGAGTGAAATGACGGAATACAAAGGACGTGTTATGTATGTCAT
TGAGAGGAAATATGATTTGGAAACCCTTCTTGAGTGGAGATTGAAAGACG
AATTGGGAAAAGAACATGGAGTCGACGTCTATGGATACAGAAGATTCGAA
GCCTATATAGTAAGTTGCATTTTGAATCTAATTTTGAATCTTTTTGAAAT
CTAACCAAATAAAAAAGATATAAAAAAATTCTAGTTTTTAAGACTTTAAC
GTAGGTTTTCAATGATTCATAATTAGCTTTTTCCAGCATCTTTTTACAAA
AAAAAAACACCGTTCAAATTTGCATGCTGCAAGAGTGAGAAAATTTTAAC
TGTTTCTATATGAACATACGTGAACATTTTAATCAAAAATGAAAAAAAAC
TTATAAACTACATAATAGTGCACTGTTGTGATCTTCTTCTCCTAATGTTA
CTGATATTGTTAAAAAAAGTCAGAAACGCTTGAATGTTCGATTTGGTCGT
GAGCTTTTCCGTGGCAGATTTTCCTTAGATTATTTGCAACATCGCATTAT
TCCATATTTTTGAAGAGATTTTGTTAAAATAAAATTTTTCTTTTTTTACA
AACAGCAAATTGAAAACCTGATGAAAAAGATTCGAACGAAAAACATCAAC
GCATTATTCATCGATGAGTGTGACATTACCGGTAATCAATTGAAAGAAAT
GATAACGAAAGTCAAACAACACGTTGATGTGATTTGGATTGCATCAAATG
GATACAGTCATCGGGAAATTTTAAAAGGTGATAAAGATTTTTCGATGTAT
GACGATTTCATGAAATATGAATTTGACGTAAATCTAAGAAACTGTGAAAG
CATAGTAAAAGAGGCATTAAGCTTTGAAGAAAGAGAAAGTTCTGAATATA
AAGAAGGTTTAGTACTTCCACCACCGAATCACCCTAATGGAAAGCAACCC
TACCATTCCAAATCATTTGAAGATGCCATCACAGAAATGAGAAAGATCAC
GAACGATGGAGTGCTAGTGATATCTGATATTCCATACGAGAAGGATGATC
TTCAAACATTGAACAAGTTGCAATTGAAATGGAAATGGTATGGAAAATAT
CTAAGCGATTTCAATGAAGGTGAAAGTCCATATCAACATCTTGTAGATGG
AAACATTTTATTGATGAGGGACTATGGATTAATTTCCGGTTTCGAGTGGA
AGAACATCATCATTATCAAGGAAGGAAAGATGGGTAAAGTTGATTACCAT
CCATGTAATTACATCATGAGATGTACCACGAATCTCATGATTGTTGATGA
AAGAAGAAACCGGTAAGATTTTTTAGATGATTAAGTTTTAAAGTTTTACC
AAAATCTTAAAACATAAAATTCACAGTTTTGATATCAGATTTTTCATATC
TTGTTCACAATATTAAATTTTATGAAATATATAGAATCTTTTCTCACAGT
CTTTCTCGATGTGGACGAAATAGGTTACTTAATCAATAATATATTTTAGA
TGGCCGTCTTATAACGTTTACTTCGATAAACCTTTTGTCACTTTATTCAT
TTTTTAAAACTACTTTTAGCTTTAATAGGCATATTTTATAACCATATCAT
TTCTCTTGTATACTTATGTAATAGCAAATCACCAAACGTTGTGTAGTTTT
ATTTTAAAAGAAAAGTTTTAAA Coding sequence (CDS) from alignment at sc0000116_pilon:784198..787669- >MSTRG.14128.1.p1 ID=MSTRG.14128.1.p1|Name=MSTRG.14128.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6966bp|location=Sequence derived from alignment at sc0000116_pilon:784198..787669- (Clytia hemisphaerica_ch_hm2_pilon)
CAAATTGAAAACCTGATGAAAAAGATTCGAACGAAAAACATCAACGCATT
ATTCATCGATGAGTGTGACATTACCGGTAATCAATTGAAAGAAATGATAA
CGAAAGTCAAACAACACGTTGATGTGATTTGGATTGCATCAAATGGATAC
AGTCATCGGGAAATTTTAAAAGGTGATAAAGATTTTTCGATGTATGACGA
TTTCATGAAATATGAATTTGACGTAAATCTAAGAAACTGTGAAAGCATAG
TAAAAGAGGCATTAAGCTTTGAAGAAAGAGAAAGTTCTGAATATAAAGAA
GGTTTAGTACTTCCACCACCGAATCACCCTAATGGAAAGCAACCCTACCA
TTCCAAATCATTTGAAGATGCCATCACAGAAATGAGAAAGATCACGAACG
ATGGAGTGCTAGTGATATCTGATATTCCATACGAGAAGGATGATCTTCAA
ACATTGAACAAGTTGCAATTGAAATGGAAATGGTATGGAAAATATCTAAG
CGATTTCAATGAAGGTGAAAGTCCATATCAACATCTTGTAGATGGAAACA
TTTTATTGATGAGGGACTATGGATTAATTTCCGGTTTCGAGTGGAAGAAC
ATCATCATTATCAAGGAAGGAAAGATGGGTAAAGTTGATTACCATCCATG
TAATTACATCATGAGATGTACCACGAATCTCATGATTGTTGATGAAAGAA
GAAACCGGTAAACGTTAAAAGACGTTAAAAAAGAAGTCGAAAACTTGGTC
AATCAAAACCCACCATCTCATCCAACAATAAAACGGCTTTTCGAATTAGT
TCTATCGGAGCTCGGTGAAAAAGGCGAACGCTCGTTTTTCGAAAAACTCT
ATTCGATCAAAGATGACCCTGTTCTTGAAGATACTGTGATTCTCAGTTCC
ATCAACTTTCTCACCAATGTCCAAAAGAAAATGCATCAGGAGATTGACGT
CCTTCTTTACTCGTGGGCCAAGAAATTAATCATAGGCGTTGAAATCAAAC
GGACACTGACTATAAAAGCTTTTGACCAGTTGGATAAATACCATAAATTG
ATAGAGGAGAGATTGAGTGATCAATTGGGACAAGGCTGGACGTATCATCC
AGTCATTTTTGTTGAGAAGGACAACCTGTTCTTCAACAATCAACATTACA
TTGACCAAGAAGCAGATTTGAAATGTTGGTTATCCAACTTGCTTGCGAAA
TATCCGACCGTTCCCTCTGGAATCATTCCACCAGTAAATCAAGTTAAAGA
CCTCCTAAGAATTGTTGTGTTTGCCATTCATGCTTCAAAAACAGCACCCA
TTACGACATCGAACTGGGTAGAGTATATCTCAAAAGCCATAGATACCGTC
TGCACTACTGACAACATACTCTTTTACAGTCAGCGTCAACTTCCCATCAT
GAAGACAGACACTTCTGAATTCAATAAGATCCTCTTTTGTGCTCCGTATG
GATGCGGAAAATCCTTCATCCTTCAGGAGAAAGCAAAACAATTGAGTGAA
ATGACGGAATACAAAGGACGTGTTATGTATGTCATTGAGAGGAAATATGA
TTTGGAAACCCTTCTTGAGTGGAGATTGAAAGACGAATTGGGAAAAGAAC
ATGGAGTCGACGTCTATGGATACAGAAGATTCGAAGCCTATATAATGGCA
TCACAATTGAATTTACAACAGAAAATCAATGCATTGAAATCGAAGAATAT
CAATCCATCAAAATGCACCAAACGAACATCATTGTATAATCAAATAGTGA
CAAATGCACAGTCTACCATTGACAACCAAAACCGCAAGTTCAACCTCGGG
AATGGTCAGTTATTTAACGACCCTATTCTTGCCGCTGATCAGCTTCTCTT
TAGAGAATATGCTGATTCAGCATTATTCAACACCAACCGCCACGATCCTG
TATTTATTCCCCCGGTTTTTCAATCACACCAATACGCGAAGAAGGATTCA
ACCGTGCATCTCCTTGATTACGATGTTGACATAAACACTCTCAAGAAATG
TTTGGATAATTTGAAGAAGGATTCGCCAGACCATTGGTTCACACGTGAGC
TCCAATATTTCCATTATCTCCATTGGTTAACAAAGGGACCTCAAGCTTTC
TCTGAATTGCAGGAAAACAAAACTGACAAGGAAATCAATGGAAAAGAATT
CAGCAATTGGATTCTTAATCTAAAGATCAAGTATCTAATGGTCAAAGAGT
TGGCAACAGTTAATATGACTCTACCATCAACAACTGAGGACAAAAACACA
TTCATCCAAGCATGTATTCAGGAATTGGCTTCAAAATCACCAAGATCAAA
ATTGGAACAAACTCTCAAAAAGCAAATTGAAAACCTGATGAAAAAGATTC
GAACGAAAAACATCAACGCATTATTCATCGATGAGTGTGACATTACCGGT
AATCAATTGAAAGAAATGATAACGAAAGTCAAACAACACGTTGATGTGAT
TTGGATTGCATCAAATGGATACAGTCATCGGGAAATTTTAAAAGGTGATA
AAGATTTTTCGATGTATGACGATTTCATGAAATATGAATTTGACGTAAAT
CTAAGAAACTGTGAAAGCATAGTAAAAGAGGCATTAAGCTTTGAAGAAAG
AGAAAGTTCTGAATATAAAGAAGGTTTAGTACTTCCACCACCGAATCACC
CTAATGGAAAGCAACCCTACCATTCCAAATCATTTGAAGATGCCATCACA
GAAATGAGAAAGATCACGAACGATGGAGTGCTAGTGATATCTGATATTCC
ATACGAGAAGGATGATCTTCAAACATTGAACAAGTTGCAATTGAAATGGA
AATGGTATGGAAAATATCTAAGCGATTTCAATGAAGGTGAAAGTCCATAT
CAACATCTTGTAGATGGAAACATTTTATTGATGAGGGACTATGGATTAAT
TTCCGGTTTCGAGTGGAAGAACATCATCATTATCAAGGAAGGAAAGATGG
GTAAAGTTGATTACCATCCATGTAATTACATCATGAGATGTACCACGAAT
CTCATGATTGTTGATGAAAGAAGAAACCGGTAAACGTTAAAAGACGTTAA
AAAAGAAGTCGAAAACTTGGTCAATCAAAACCCACCATCTCATCCAACAA
TAAAACGGCTTTTCGAATTAGTTCTATCGGAGCTCGGTGAAAAAGGCGAA
CGCTCGTTTTTCGAAAAACTCTATTCGATCAAAGATGACCCTGTTCTTGA
AGATACTGTGATTCTCAGTTCCATCAACTTTCTCACCAATGTCCAAAAGA
AAATGCATCAGGAGATTGACGTCCTTCTTTACTCGTGGGCCAAGAAATTA
ATCATAGGCGTTGAAATCAAACGGACACTGACTATAAAAGCTTTTGACCA
GTTGGATAAATACCATAAATTGATAGAGGAGAGATTGAGTGATCAATTGG
GACAAGGCTGGACGTATCATCCAGTCATTTTTGTTGAGAAGGACAACCTG
TTCTTCAACAATCAACATTACATTGACCAAGAAGCAGATTTGAAATGTTG
GTTATCCAACTTGCTTGCGAAATATCCGACCGTTCCCTCTGGAATCATTC
CACCAGTAAATCAAGTTAAAGACCTCCTAAGAATTGTTGTGTTTGCCATT
CATGCTTCAAAAACAGCACCCATTACGACATCGAACTGGGTAGAGTATAT
CTCAAAAGCCATAGATACCGTCTGCACTACTGACAACATACTCTTTTACA
GTCAGCGTCAACTTCCCATCATGAAGACAGACACTTCTGAATTCAATAAG
ATCCTCTTTTGTGCTCCGTATGGATGCGGAAAATCCTTCATCCTTCAGGA
GAAAGCAAAACAATTGAGTGAAATGACGGAATACAAAGGACGTGTTATGT
ATGTCATTGAGAGGAAATATGATTTGGAAACCCTTCTTGAGTGGAGATTG
AAAGACGAATTGGGAAAAGAACATGGAGTCGACGTCTATGGATACAGAAG
ATTCGAAGCCTATATAATGGCATCACAATTGAATTTACAACAGAAAATCA
ATGCATTGAAATCGAAGAATATCAATCCATCAAAATGCACCAAACGAACA
TCATTGTATAATCAAATAGTGACAAATGCACAGTCTACCATTGACAACCA
AAACCGCAAGTTCAACCTCGGGAATGGTCAGTTATTTAACGACCCTATTC
TTGCCGCTGATCAGCTTCTCTTTAGAGAATATGCTGATTCAGCATTATTC
AACACCAACCGCCACGATCCTGTATTTATTCCCCCGGTTTTTCAATCACA
CCAATACGCGAAGAAGGATTCAACCGTGCATCTCCTTGATTACGATGTTG
ACATAAACACTCTCAAGAAATGTTTGGATAATTTGAAGAAGGATTCGCCA
GACCATTGGTTCACACGTGAGCTCCAATATTTCCATTATCTCCATTGGTT
AACAAAGGGACCTCAAGCTTTCTCTGAATTGCAGGAAAACAAAACTGACA
AGGAAATCAATGGAAAAGAATTCAGCAATTGGATTCTTAATCTAAAGATC
AAGTATCTAATGGTCAAAGAGTTGGCAACAGTTAATATGACTCTACCATC
AACAACTGAGGACAAAAACACATTCATCCAAGCATGTATTCAGGAATTGG
CTTCAAAATCACCAAGATCAAAATTGGAACAAACTCTCAAAAAGCAAATT
GAAAACCTGATGAAAAAGATTCGAACGAAAAACATCAACGCATTATTCAT
CGATGAGTGTGACATTACCGGTAATCAATTGAAAGAAATGATAACGAAAG
TCAAACAACACGTTGATGTGATTTGGATTGCATCAAATGGATACAGTCAT
CGGGAAATTTTAAAAGGTGATAAAGATTTTTCGATGTATGACGATTTCAT
GAAATATGAATTTGACGTAAATCTAAGAAACTGTGAAAGCATAGTAAAAG
AGGCATTAAGCTTTGAAGAAAGAGAAAGTTCTGAATATAAAGAAGGTTTA
GTACTTCCACCACCGAATCACCCTAATGGAAAGCAACCCTACCATTCCAA
ATCATTTGAAGATGCCATCACAGAAATGAGAAAGATCACGAACGATGGAG
TGCTAGTGATATCTGATATTCCATACGAGAAGGATGATCTTCAAACATTG
AACAAGTTGCAATTGAAATGGAAATGGTATGGAAAATATCTAAGCGATTT
CAATGAAGGTGAAAGTCCATATCAACATCTTGTAGATGGAAACATTTTAT
TGATGAGGGACTATGGATTAATTTCCGGTTTCGAGTGGAAGAACATCATC
ATTATCAAGGAAGGAAAGATGGGTAAAGTTGATTACCATCCATGTAATTA
CATCATGAGATGTACCACGAATCTCATGATTGTTGATGAAAGAAGAAACC
GGTAAACGTTAAAAGACGTTAAAAAAGAAGTCGAAAACTTGGTCAATCAA
AACCCACCATCTCATCCAACAATAAAACGGCTTTTCGAATTAGTTCTATC
GGAGCTCGGTGAAAAAGGCGAACGCTCGTTTTTCGAAAAACTCTATTCGA
TCAAAGATGACCCTGTTCTTGAAGATACTGTGATTCTCAGTTCCATCAAC
TTTCTCACCAATGTCCAAAAGAAAATGCATCAGGAGATTGACGTCCTTCT
TTACTCGTGGGCCAAGAAATTAATCATAGGCGTTGAAATCAAACGGACAC
TGACTATAAAAGCTTTTGACCAGTTGGATAAATACCATAAATTGATAGAG
GAGAGATTGAGTGATCAATTGGGACAAGGCTGGACGTATCATCCAGTCAT
TTTTGTTGAGAAGGACAACCTGTTCTTCAACAATCAACATTACATTGACC
AAGAAGCAGATTTGAAATGTTGGTTATCCAACTTGCTTGCGAAATATCCG
ACCGTTCCCTCTGGAATCATTCCACCAGTAAATCAAGTTAAAGACCTCCT
AAGAATTGTTGTGTTTGCCATTCATGCTTCAAAAACAGCACCCATTACGA
CATCGAACTGGGTAGAGTATATCTCAAAAGCCATAGATACCGTCTGCACT
ACTGACAACATACTCTTTTACAGTCAGCGTCAACTTCCCATCATGAAGAC
AGACACTTCTGAATTCAATAAGATCCTCTTTTGTGCTCCGTATGGATGCG
GAAAATCCTTCATCCTTCAGGAGAAAGCAAAACAATTGAGTGAAATGACG
GAATACAAAGGACGTGTTATGTATGTCATTGAGAGGAAATATGATTTGGA
AACCCTTCTTGAGTGGAGATTGAAAGACGAATTGGGAAAAGAACATGGAG
TCGACGTCTATGGATACAGAAGATTCGAAGCCTATATAATGGCATCACAA
TTGAATTTACAACAGAAAATCAATGCATTGAAATCGAAGAATATCAATCC
ATCAAAATGCACCAAACGAACATCATTGTATAATCAAATAGTGACAAATG
CACAGTCTACCATTGACAACCAAAACCGCAAGTTCAACCTCGGGAATGGT
CAGTTATTTAACGACCCTATTCTTGCCGCTGATCAGCTTCTCTTTAGAGA
ATATGCTGATTCAGCATTATTCAACACCAACCGCCACGATCCTGTATTTA
TTCCCCCGGTTTTTCAATCACACCAATACGCGAAGAAGGATTCAACCGTG
CATCTCCTTGATTACGATGTTGACATAAACACTCTCAAGAAATGTTTGGA
TAATTTGAAGAAGGATTCGCCAGACCATTGGTTCACACGTGAGCTCCAAT
ATTTCCATTATCTCCATTGGTTAACAAAGGGACCTCAAGCTTTCTCTGAA
TTGCAGGAAAACAAAACTGACAAGGAAATCAATGGAAAAGAATTCAGCAA
TTGGATTCTTAATCTAAAGATCAAGTATCTAATGGTCAAAGAGTTGGCAA
CAGTTAATATGACTCTACCATCAACAACTGAGGACAAAAACACATTCATC
CAAGCATGTATTCAGGAATTGGCTTCAAAATCACCAAGATCAAAATTGGA
ACAAACTCTCAAAAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000116_pilon | genome | sc0000116_pilon:784198..787669 - |
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