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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000116_pilon:584019..588141+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14118.1.p1 ID=MSTRG.14118.1.p1|Name=MSTRG.14118.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4123bp|location=Sequence derived from alignment at sc0000116_pilon:584019..588141+ (Clytia hemisphaerica_ch_hm2_pilon)
gttttccaaaaaaaaaaaaggattggaaaCTAACAAAAGGGATTAATGGT
AAAGGTACTTAAAGACagaaaaagttgaattgtgaataaagtagaacaaa
gatcggaatagagaagaagaagaagaagaaacaaaattcATACATGATGT
GGTTATTACGTTGCAGCCTTTTGGCATGGCTTGTTGTATTTTTTATCGAA
GTGCATTTGACCAATGCAAACGGTGACGCAGTTGACCATTATATACATAG
TAAGttaacaaaaatattaagatACTTTTCTAACTGGAATaatcggccaa
aatatcgtcagtggaaaattacactccaatttttgtccccaccgaaaata
atcaaataaaccatcactgcaaaatattatgctattttcccatcctcact
gaattttctggcttgaattgaaaacaaaagaatgtaaATCCCAAGCcaga
aaaaatatggaaatattaatccccatcgagttttcaGTCCTTAATTTTTA
TCTCCactagctgaaaaaatcctactgggtcaaCTTTTGAGGGGGGCTGG
TAATAAATTTACAAGGAAGAGGGAATCGTTGTCCATGAAAATCCCAATGA
TTCTCAGATATTTTGACTTCATACTTTCAtggtaaactcgaacccagGTT
GCTATTTGTACTTATTTTactaccgtcgttttgtataagtttcccatttc
cgcactaagattcctttgccgtTTTTCTATTGACCAGGACTACGGTTTGT
TAAAAAATTAGCCTCGGAAAGTTAGGCAAATTTGTtgcacaagattttcc
gtacctttagaaacaaaccctttccaatcgcTTGCTGGTTATCCTatggg
aaaaatagcggaaagatttcggaaaagtgacaagaatcttagtgcgggga
aacttataaaaaacgcgacggtagtctgaatcgcagacctctataggtat
accttatcgggaaaaacttcgtcggggaaaagtcacgaaattttggacaa
gtgacgaatattttccccgacgaaagttttccccggccttaatgcgttta
ccaactaaccagcaagtgacgaatttttccccgacgaaaattttccccaa
agaagttttccccgataaggtacctcTTATATATACATCTTAATAAGGAA
CTCTTTTTGATAGATGACGAGCATAGAAGCATATGCTTTCACTTAAACTA
ATTAAggtcaaaatcatcaaaaattttcaatttggttttcagtcaaaaat
tttgatcacattacAAACCGAAAGATTGGTAATACAAGAAAAATATTCCC
TTATCATCATGATCACCCACATGGAGACAAGGTTCACGAACATGAAAACG
AGGTTCACACGAAACCTGGTCACCATGATGACGACAAGAAAACGCGGCCA
CAGTTTGTCGGCCCAAAGGTAAGGACAGTTAATCTCGTATCCATGTATCC
CAGGCATTTGAgataaaagaattttaaacaTATAATAGACATGATAAAGA
TAACTTtagattgaaaagaaaattagcaacctcgtacccagagccactag
caccacttttttaatttcactgacAAAGGTGATGCAACTTGTTTCAACGT
CAATTTACATACATGACttacaatttttctttgacttttatATCAATAGC
ATTTGAGAAGAAAGACCAATCAACATGGGCGTAAAGGATTACGTCACGGA
CGTCATGGGCGAAAAGGATTACGTAATGCAGGCGAAGGAATACGTAATGC
AGGCGAAGGATTACGACACGGGCGTAAAGGATTACGTCACGGGCGTCATG
GGCGAAAAGGATTACGTAATGCAGGCGAAGGAATACGTAATGCAGGCGAA
GGATTACGACACGGGCGTAAAGGATTACGTCACGGGCGTCATGGGCGAAA
AGGATTACGTAATGAAGGCGAAGGATTACGACACGAACGAAAAAGATTAC
ACAGATTACATCAAGTTGGTACAGAACATCACAACCAAAACAGGACAGGG
CGCCATGGCAGAAGAGGAGGGCGTAAAGGTAAACGCCCCAACCAAAACGG
ACGTCGCCAAGGACAAGAAGGGAAGCACGGACGTAGAGGTGGAAACAATA
AAAGACAAGGAGGAAAGAATGTTTTTACAACGGTATTGGGCAAAAAACTG
AAGAGACATGCGTTGAAGTTGTTACAGAAAAGAGCGCTCTCTTCCCAAAT
TGAGCCTGAGGTCGTGCCTGATCAAACAGCACCATGAAAGAGGGGACAGT
TCGagtcaatgaagtataagcccgaagggctagaattgaatctttaacct
ttctcaattaagaaaaagtgaagccttaaaatatgcgccgtatttttgac
gacgaattgaatctagcaactcaacaattatttttgaaatttagccgTTA
AATTTAGTTCCAATccgtcatttgtgtaaaatccAGGcgggccgctcaag
gccgcgcaactttggtaggattttgttggcttcaaatcctaccaaggaga
ttcgattctagcccttcgggcttatacttcattgggacAGTTCGAGTGCT
CTCATTGTCTACCGTTGGGATTTAAATCTCGTAAAACTTTCTCATAAAAA
GAAGAAGATGCTCGTAAAATAGACAAATAACAACATTAATTTCATATTAT
GTTTTGTTACGGATTAATAAAAGAATAATCATAAAATCACTCTTTATTAT
AGCTTTTTATCCCTGTCTCCCTCTTATACCACCGTTGAAGTTACGGCCTA
CAGATTATACACTGAAGACGGCTTTTTATAAATAAGCTGGATCATTTGGC
GCTAAAAACTACGTCGAGTTTTTCTATTTGTAgtaaatgggctgttccat
taaatttccatacaggcgggtggacgaaccttttaaagtcaaaaaaagat
tctagaaatgtgtggatacccttTGGAAAAcggcaatatttgcaaaagaa
cccttggaaaattAAATTAGACCTTAAATTAGACTAAAACCGGTCTTTTA
CCCCATGAAATTATTAGAATACATTTTTAACCCCCATttaaatgttcgtc
cacccctccctgtatggatataaaatggaaggGCCCAATTAATAAAACTA
CAACAGAACACAATATGATACCGTTTTGCTCCGAAGTGAAATTTTACCTA
GGGACTGCTCGGGCAGAAGATCGATTTAGATCAAAGAATTTTAATATGGG
TATTAATCACTAATCGTTCAACATTCTGTACTCCATctgcaaaataaaaa
caacagaTAAAACCACGTGGTCTTTACGCTCACAATAGCTGATCACTGAT
TGGTCGacattcaatatcaaaaactaaATGATCAACATGGGGCGCATAAG
ATTTTACAAACTCtatatgacgtaatgttactttccataatggcggcaaa
TAGGATTTCAATTTCGACAACATGTCATCGACAAATGCCTGCCATACCAC
ACACTTATGCTTTGAGAGCTTTCCTTTGTAGCAATCTCGTACTAAGTTTC
GATTTTCCCTTTCCAAGTCGTTGCATTCAGGAAACACATAATTATCTACG
CTCATACCTTTAGATTTTTCATACGTTATCGATAAATCCCTTTCTTTGTT
GACAACTTCTGTATCTAAGGGTCCTGCTTTATTCTTCTCAGACAATGTCG
ACGTTTCCAACTCTATATCTTCAGGAGGTTCCGAATCCGTTACGTCAAGT
CCATCGCGACACGGCACAAATTCTGTTTTCACAACATGTTGACATATCTC
AAATTCTCCTGCATTCGTAATATGATCTTGAAGAATAGCATCACTACCTG
TACCACTATCCAGAGCGTTTGCACCACTATCGACATTCTCATGAATATGT
AGCCACCCGCCCTTCGCTTGATTAAGGGCGTGACAGGCGGTCGCCCATGA
GAGTGAAGAGCTTGGGATAAGACCAAGGTTAACACGATCTGCAATGTTCT
TTGGACATACCTAGAATAAGAAAATACATCTTTTGTAAAGTTTTGGCtga
gcttgatttaaaagggAAAGTTTTGGTGTTGGAAGATTTAGCAAGACGCA
ATCAGAATTAGgttaatacatgttttttttataagcaagtatCTGTCCCA
ATTCCAGGCtggcattatgctta Coding sequence (CDS) from alignment at sc0000116_pilon:584019..588141+ >MSTRG.14118.1.p1 ID=MSTRG.14118.1.p1|Name=MSTRG.14118.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2610bp|location=Sequence derived from alignment at sc0000116_pilon:584019..588141+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGTGGTTATTACGTTGCAGCCTTTTGGCATGGCTTGTTGTATTTTT
TATCGAAGTGCATTTGACCAATGCAAACGGTGACGCAGTTGACCATTATA
TACATAtcaaaaattttgatcacattacAAACCGAAAGATTGGTAATACA
AGAAAAATATTCCCTTATCATCATGATCACCCACATGGAGACAAGGTTCA
CGAACATGAAAACGAGGTTCACACGAAACCTGGTCACCATGATGACGACA
AGAAAACGCGGCCACAGTTTGTCGGCCCAAAGCATTTGAGAAGAAAGACC
AATCAACATGGGCGTAAAGGATTACGTCACGGACGTCATGGGCGAAAAGG
ATTACGTAATGCAGGCGAAGGAATACGTAATGCAGGCGAAGGATTACGAC
ACGGGCGTAAAGGATTACGTCACGGGCGTCATGGGCGAAAAGGATTACGT
AATGCAGGCGAAGGAATACGTAATGCAGGCGAAGGATTACGACACGGGCG
TAAAGGATTACGTCACGGGCGTCATGGGCGAAAAGGATTACGTAATGAAG
GCGAAGGATTACGACACGAACGAAAAAGATTACACAGATTACATCAAGTT
GGTACAGAACATCACAACCAAAACAGGACAGGGCGCCATGGCAGAAGAGG
AGGGCGTAAAGGTAAACGCCCCAACCAAAACGGACGTCGCCAAGGACAAG
AAGGGAAGCACGGACGTAGAGGTGGAAACAATAAAAGACAAGGAGGAAAG
AATGTTTTTACAACGGTATTGGGCAAAAAACTGAAGAGACATGCGTTGAA
GTTGTTACAGAAAAGAGCGCTCTCTTCCCAAATTGAGCCTGAGGTCGTGC
CTGATCAAACAGCACCATGAATGATGTGGTTATTACGTTGCAGCCTTTTG
GCATGGCTTGTTGTATTTTTTATCGAAGTGCATTTGACCAATGCAAACGG
TGACGCAGTTGACCATTATATACATAtcaaaaattttgatcacattacAA
ACCGAAAGATTGGTAATACAAGAAAAATATTCCCTTATCATCATGATCAC
CCACATGGAGACAAGGTTCACGAACATGAAAACGAGGTTCACACGAAACC
TGGTCACCATGATGACGACAAGAAAACGCGGCCACAGTTTGTCGGCCCAA
AGCATTTGAGAAGAAAGACCAATCAACATGGGCGTAAAGGATTACGTCAC
GGACGTCATGGGCGAAAAGGATTACGTAATGCAGGCGAAGGAATACGTAA
TGCAGGCGAAGGATTACGACACGGGCGTAAAGGATTACGTCACGGGCGTC
ATGGGCGAAAAGGATTACGTAATGCAGGCGAAGGAATACGTAATGCAGGC
GAAGGATTACGACACGGGCGTAAAGGATTACGTCACGGGCGTCATGGGCG
AAAAGGATTACGTAATGAAGGCGAAGGATTACGACACGAACGAAAAAGAT
TACACAGATTACATCAAGTTGGTACAGAACATCACAACCAAAACAGGACA
GGGCGCCATGGCAGAAGAGGAGGGCGTAAAGGTAAACGCCCCAACCAAAA
CGGACGTCGCCAAGGACAAGAAGGGAAGCACGGACGTAGAGGTGGAAACA
ATAAAAGACAAGGAGGAAAGAATGTTTTTACAACGGTATTGGGCAAAAAA
CTGAAGAGACATGCGTTGAAGTTGTTACAGAAAAGAGCGCTCTCTTCCCA
AATTGAGCCTGAGGTCGTGCCTGATCAAACAGCACCATGAATGATGTGGT
TATTACGTTGCAGCCTTTTGGCATGGCTTGTTGTATTTTTTATCGAAGTG
CATTTGACCAATGCAAACGGTGACGCAGTTGACCATTATATACATAtcaa
aaattttgatcacattacAAACCGAAAGATTGGTAATACAAGAAAAATAT
TCCCTTATCATCATGATCACCCACATGGAGACAAGGTTCACGAACATGAA
AACGAGGTTCACACGAAACCTGGTCACCATGATGACGACAAGAAAACGCG
GCCACAGTTTGTCGGCCCAAAGCATTTGAGAAGAAAGACCAATCAACATG
GGCGTAAAGGATTACGTCACGGACGTCATGGGCGAAAAGGATTACGTAAT
GCAGGCGAAGGAATACGTAATGCAGGCGAAGGATTACGACACGGGCGTAA
AGGATTACGTCACGGGCGTCATGGGCGAAAAGGATTACGTAATGCAGGCG
AAGGAATACGTAATGCAGGCGAAGGATTACGACACGGGCGTAAAGGATTA
CGTCACGGGCGTCATGGGCGAAAAGGATTACGTAATGAAGGCGAAGGATT
ACGACACGAACGAAAAAGATTACACAGATTACATCAAGTTGGTACAGAAC
ATCACAACCAAAACAGGACAGGGCGCCATGGCAGAAGAGGAGGGCGTAAA
GGTAAACGCCCCAACCAAAACGGACGTCGCCAAGGACAAGAAGGGAAGCA
CGGACGTAGAGGTGGAAACAATAAAAGACAAGGAGGAAAGAATGTTTTTA
CAACGGTATTGGGCAAAAAACTGAAGAGACATGCGTTGAAGTTGTTACAG
AAAAGAGCGCTCTCTTCCCAAATTGAGCCTGAGGTCGTGCCTGATCAAAC
AGCACCATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000116_pilon | genome | sc0000116_pilon:584019..588141 + |
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