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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000116_pilon:578393..581551+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14117.1.p1 ID=MSTRG.14117.1.p1|Name=MSTRG.14117.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3159bp|location=Sequence derived from alignment at sc0000116_pilon:578393..581551+ (Clytia hemisphaerica_ch_hm2_pilon)
tgtaattcgaatctttctctaattcgaataaaattgttagtcccttgaag
atcgaattatagaaattcaACTGTACTCAgttaatgtttttgttctttag
aaataaaacaaaaaaaacataataaacaTTATTAAAAGTACACGGATGGG
AAATACTTTAACAAACACTTCCACATCATCGACCCACATTGATGAGAAAA
TCAATACCAATTGCATAGTGGTATACTCAACCACGGTCTGTGGTTTTTGT
ACCAAAGCAAAGAGACTGATGGATGAGATGGGGTTACAATATTCAGTGGT
GGAGATTGACAGATTGAGTCCATCGGAAGGAGGAGTTGTTTCACGGAGTT
TGACAGAGAAAACCAACATGAGAACTGTAAGTCTAAGTATGCATTCGCTG
TCATCAaggcaaaaggtccaatctGAAAATTAGTGTTTGAGGaaactaag
aatttttctgttttgctaactttaaattttaagaTTGACCCTTTTTCATG
TAGATGGGATCCCCCTCACTATGAAAAAAGGGCCAAGTTCAAGATTTAAG
GTTAGCCAAACAGAAAAATTATCGGttttctcagacactaattttgagat
tggaccttttgcctTGATGGCAGTGAATATACCTgtcttttataagagca
aactacatttgactctctaattcgatctcccaggatccaaaaattttatt
cgagttagagaaagattcgaattacagagagtaatgtATTCTAATTTCTA
GCTGCatttgactctctctaattcgatcttccaGGATAGGGGACAGGgga
ctacaatcatggtcagaaTATGTTGACATTTCTGAGTATTTCggtgtttt
tcagaatttaaagttcgggcgaaaatgGCAATTTCAGCCTTTTCACTTTA
TTCCATTGGATATTTTGAGTTGGGAGGGGCCTgttcatagcgtcagcccc
ccctcttgttggggggggggggttacaccctaaatcTTTCCTaaaaaagg
agggggctggaagtacaccacttttttggggggacctatgtaattggggg
gagctaaaatctcatcacttaacatgggggctaaaataattcagcttaat
agttggcttcaattacccaaattgaagctcatgaatctgaaaaatttttc
cctgcggcgcaatatttttataaaaagtgtgctaaatattttatcttaaa
cttagaactgaaTGCAAATTAcattggaaaaaacttttttactggatcaa
ttttttgaaagtgtctagggtcaaaagtcctgggggctaacaaaaaaatc
acaaatctttggggggacttaaaactcagggggacctaatttttgcctgg
gacctaaacccaggctgacgctatgctGTTGGCTTCCTCTAAGCCTTGTT
GCTTGGACGATTGTTGAGACTTTAGATCGTCAGATCATTACTTTCTATCC
CTAAGTTCGAGCACTTAAAATTCACTTGcggttttgacttttttctggga
aattccccttttgcCAAATATTATGGACACGATTGTagtattttagttcg
aattacagagagattcgatattttagttcgaattacagagagattcgaac
aACAAAGATTGGAGTTGActgtatataagaacataaggcttcgatggtta
AAAGATGAAGAAcgaatttaaaatattttaaggccTTATATGGACCCTTG
TGCAGATTTTGCGGATTTGGGTGGTATCCGCGAGATTAAGTCAGTGTGTA
TAATCTGGCAGCAAAAAGACATAATCATGAAAATATTCTCCAGATAACGC
TATCCGCGAGATTAAGTCCCTGTggaatcttaaaattttgcgcATGAGCT
CGactcatttctttcattttccttgggattttttaaattgaaaaatagcg
aaaatgtgaaaaaagcgaaaatgagttcctgcgaaaattattttccttaa
GGTAGTTCCGATAAAGAAATGAAGCCTTTTTGTTGGTTCTAATTATGGTT
CTAATTGGTGTAGCCCCGGGTAAGTAGAAAACCTggccatatggcccggg
ccagagaggtgggccaggttttctactTATCCCGTAACCCCTTTAGCAAG
CCAAGTATAGCTTTATTTGTTTGCATAAATTTTTACATGGCTTGAAATAA
CTTTCACTTTCTTGAGGTTGATCAcaatcttcttttttatttttcaggtg
cCGCAGATTTTCATCAACGGTAATTTGATTGGTGGCTATTCTGAACTGAT
AGCTCTACAACGCACTGGGAATTTGTTACGTCGCGTTGCCGAGTGTGACG
TGAATTGCTCGAAATGACGTTGGTTGTGAGtgacattttttggaaagatt
TGATTGGTTCTGGTTCTGTATTAGTTTCATCATTTTGTTACAAGAGGTGT
TTGCACGAAATCTGATATAAACATACAATTTAAATAACATCCTTAGACTC
GCCGCATTAAATTGGTGAAAGTTCGCCCGTACTGTGCAATGGTATAAAAA
TTCGCCCGCGAGTGCGGCTGATCCTTTTACCGTGATCCGTGACTGGATAC
AGTTAACTTAATTTacatttaacattttcaaaaactttttttaacacAAA
GTTGTTGGCGAGACTAATCATAGTTTTTAGAAAGTTCGAAATCACAAAGC
TAAAAAACGGCATTATCGGCACTTTAAAGATTGTTCAATATCTGCAGTTT
TTGAAGTTCGCATTGTAGAATTCTTCTCAACAAATAATGGTCGACTAAAG
TCATTAGGACTGAGACAATTTGGCTCAAATTTCTGGGCCAGTTTATAGCa
ggcaaaactttaaaatattgaGGATTAATCTCAGGTGGCTAATAAAGGTC
CCttcccgcttgttaattttcgatttcttttccaACTCCCCTGCACTTTA
TTAGGACTTCTCCATTAGAAATATTTGCAAATATTGCCCCCTTATTTTAT
AAGGTGTACCTGAGAGTGCCGACATATGCTTTAGTCCTGTTTGTGCCTTT
TAAGACCAAAAAATGAACGGTGCAACTATTAGTTGGCATTCATAAAAGCC
tatttgaatttaaagaattttttaaaatataaaattgatgtattgatatt
aatttgtaaatttgaagGTTTTTACATTCTCAATaagctaaaaaagtgca
ttaaagtta Coding sequence (CDS) from alignment at sc0000116_pilon:578393..581551+ >MSTRG.14117.1.p1 ID=MSTRG.14117.1.p1|Name=MSTRG.14117.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=702bp|location=Sequence derived from alignment at sc0000116_pilon:578393..581551+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAAATACTTTAACAAACACTTCCACATCATCGACCCACATTGATGA
GAAAATCAATACCAATTGCATAGTGGTATACTCAACCACGGTCTGTGGTT
TTTGTACCAAAGCAAAGAGACTGATGGATGAGATGGGGTTACAATATTCA
GTGGTGGAGATTGACAGATTGAGTCCATCGGAAGGAGGAGTTGTTTCACG
GAGTTTGACAGAGAAAACCAACATGAGAACTgtgcCGCAGATTTTCATCA
ACGGTAATTTGATTGGTGGCTATTCTGAACTGATAGCTCTACAACGCACT
GGGAATTTGTTACGTCGCGTTGCCGAGTGTGACGTGAATTGCTCGAAATG
AATGGGAAATACTTTAACAAACACTTCCACATCATCGACCCACATTGATG
AGAAAATCAATACCAATTGCATAGTGGTATACTCAACCACGGTCTGTGGT
TTTTGTACCAAAGCAAAGAGACTGATGGATGAGATGGGGTTACAATATTC
AGTGGTGGAGATTGACAGATTGAGTCCATCGGAAGGAGGAGTTGTTTCAC
GGAGTTTGACAGAGAAAACCAACATGAGAACTgtgcCGCAGATTTTCATC
AACGGTAATTTGATTGGTGGCTATTCTGAACTGATAGCTCTACAACGCAC
TGGGAATTTGTTACGTCGCGTTGCCGAGTGTGACGTGAATTGCTCGAAAT
GA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000116_pilon | genome | sc0000116_pilon:578393..581551 + |
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