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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000116_pilon:428178..434036+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14106.1.p1 ID=MSTRG.14106.1.p1|Name=MSTRG.14106.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5859bp|location=Sequence derived from alignment at sc0000116_pilon:428178..434036+ (Clytia hemisphaerica_ch_hm2_pilon)
AACTTTGTTTTATGTTATAAGTGACTTTTATGTTACTTTGTTACAAGGTA
AGCTGTCAACGGTTAAGTGTAAAACTAAAAACAGTTCTGTAAAAGCCAAA
AAGCTTTCTTTTCTTATCAAATCGCAAGTAGAAAAAGAAGGTTGTTGGTT
TTTGAGCAATATAACTTATCACCatacaaaaaatgaagattgCTTTTGTT
TTGGCAGCCCTGGTGGCTGTTTGCTTTGCTGCACCACAAGTAAGTtagat
ttgttttatttatctATGGTCGTCGTTTTGGATACCCGGGGTGCACTTTT
AAGGGTAATAAACAACCGACGGGTAGCATTTAACAGGTAGCATTTCACTG
AGTTTTTCGGGATTTTCAGCTTCTCTTTCTGCGTGGAATAGCTGGCTGAA
GAttggaaaggtttttttatttcagtacCTTAATAAGGATCTTAATTAAA
CGTCCTTTTCCTGGGGAAATGTCTGGTTTCGGGGAAAAGACTGTCGGGGA
ATTTTCGATTTGGGAGATGTTTGGTCAGAGTCGCAGGTGAACGTCTGTTG
CGAGAAAAAATCGTCACGAGAAAACTAAACTAGTCGGTTTAATCAATCAT
GCCAGCGAACTGGAACATAAGGGCGGCGGGTGCTCGTTAAAATACGCCCG
CTTCTTCCAACGCTcccttttcccgcgtgatatcGTACCGGGCCAACTGT
GTGAAAAATGGTTTTGCTTGCATATAAAATGACATCAATGGCAAAAAGGC
TTATTGGACAGACTAGTTTGTTTTTAGCCTTCCAATATCCTTCTTCGACA
TGTTCTGTCTTTTAAAGAGGTCAGCTTTGAAAATGCCAAGAATAATAAct
caaattttgatgttttttttagaGAGTTGAGGTGGAGCGAATCCCAATGA
TCAAATTAGTCAAATCATCTAAAATTCAAAGAAGCAACAACTTGGGTTTC
AGTTATTCTAACTGTGgtaagaaaatgttgatttttataATAAAGGAAAA
GTCTTGAATCTTGAGAGCTTTAACTGCATAAGCAACCCAAGCAAAACCAC
CATAACAAATTGCTTACCTCTTtgaggaggggggggggctctcaCCCCCA
AACAGAACAACTATGataaatacacccccttctcgcagacccactgggaa
cccttcccattaacaaaattgaccgaaatatcgtcccggtggaaaattat
actctaatttttgtccccaatgaaaaatagtgaaaaattttgtgctattt
tttccatccacTGTATTTTAtggcttgaaaacaatggatttCAAATCCCC
AGCTATGAAATAACATACGATAGGacatcaatccccatcgatttttagcc
cgttatttttacccccactggctcaaaagatcccaccgggtctgtgagaa
gggggtgtataaatGTGAGCAAGGTGGTTGGTTCAATCCTCGGCCGGGTC
GACGTATTTAGTACaaaaaaaGGTACTTGATGCCTTTCTGTTTGTTGCTC
AGCAATGAAAGGATGGATCAAGAGTATGTGGAGCAATCTAGGATAAGGAT
TGACGTCCCCACCTACCTCTGGGTAGACAGCTAAAGGAAGCCTTCAGGTC
ATCCTTGACTGCGGTCGAAacttacagttgacgctctctaattcgttctt
caaggggaattggattttcatcaaataagggagcgtattgaATAGTAAAG
CGtaatttatgagagtttcttgttgacgttGACTTTAAATGTTATCCAAT
AATGGAGCATATCAAATAGAAGAACgtagtttatgagagtttcttgttga
cggggacctattaaaatttcatcgaatcagagagcctatcgaatagtaga
acgtcgaattagaaagcgtcaaATTAGAAAGCGCCATCTGTATTTATTTA
TCTACTTACTTTACTGATTTTCTACAGTGATGCTAAAAACCATTTTTTAT
CATCGTTTCAGCTGAAGGCTCTGACTTGAACATCAAATCATTGAGCATTT
CTCCAGATCCAATCACCATCCCAGGAAACGTAACCATCGGGTTAGATGCT
GCGATCAGTACCGAGATCACCGACATTACATCTGCCGCTCTTGTTCTTAA
ACGCAAAATCTTTGGTGTCTTTGTTGAAATTCCATGCGTTGATAATCTCG
GATCATGGTATGAAAACTTCATTTCCAAAGTTATATAGACCTATCAACCC
TACATGCACTGAAATTTATAAACCCTAAACAAAGCTATATATCTGctatc
tttgatcagagtttttttggAAGTGCCAAAGAAACCATTGTATTAACATC
GTAGTAAACCATTAAAAATCTTTGCCTGACGAGAAACGGTGCTACATCAC
TTGTAGTCGcttttctatccccactggattttctggcttgaaaacaatgg
aattcaaacccccagccataaaaaacatgggaatatcaatccccattgac
ttttgatccgttatttttacccccactgactaaaaaaacctaccgggtct
gtgagaaggggggtgTATATACTTCCACTATCCATCACTCGACTACGGCT
ACTTCTAACcccgaaattgattttgataatagGGGATGCgcatcgtgtat
aaaatttccGTCTGGTAGGTACCCTAAATTTGCAAGTACCTTATTGGCCA
AAACTAAGTCGACCCTAATTTTAGTcagccttaattattagtcggccctg
aTTTCAGTCACTGCGTCAAAATTCAGTCATTAAAGGCCGACTAATGATTA
TGACCGATTAAAAACTTGgaccatttctaaatttacaagcagatggaaaa
taggaaaaagcttaaaatactgggaaataaggaaagcttaattataaact
tttaatttggcccaaatttttagttgaccttaattttagtcggcccaaat
ttttagtcggccctaagttttggccgataaggtaaccTGTTGCAAGCGAG
TCGAGAAGCGATTCGAAAGCTCGCATGTTCTAGTTCTACCATAATGATCG
TCTGCGGTGGAGTGTTTGCAATGGCAATATAACCCCTCAAAATAAtaaag
acgggggtaactctcggacgggggTTTTATACATGACACGAATCCCCTAC
ATCGAAACACATCAGAGGGGATTTGTGTAGCCTATTACCACCGCCATCCT
TGGTAGAAAATCTTTACAAGAGCTTAccaagatcttatcaagaaactttt
acAGAACTTTGCAAGATTCTTGTCAAGATCTTGTTAATTAATTTAAAGAT
TCTTGCAGATATTTCATCATAAAGATTCCATTCATAAATGTTTTTCACCT
TTTATAGCACTTACAACGATGTCTGTTCTTTATTGGCTAAAATCGAATGT
CCCCAACAATTGATAGACATGGGGTTCAAATGCCATTGTCCATTCCCTGC
AAAAGAGTTCAACGTACCTGCTGGAACTGTTATTGCATTACCAAAGCTTC
CATTACCATCATTTGCCGAAAATGTAAGTTGTAAAGACCGGTCTCCATTT
TCACGCGAAATGgacgacagtttttttcttaatcttttttgcctgaagaa
aagattacgtcatgaaatttcacgtgaacaaaaaaaaaagttgaaggaag
ttctacttttttcatccgatacgtcaatttcgaccaatggaatttgcttc
atttttcaaccgaccaatgaccttacaaaaacgtcaaaaagttttcgctc
atgtcgcgcgaaagtggacacCGATTTTCatagtcgaaatggatcatggg
taatcaggattgattgcgcctccataacggcttCCCTTCGGCttgacgca
aaaatcttcaaaactttttaaaactttggaccaatagtataTCGTCATTA
GCGCGTGGTGGTTCTGAtcacccattacgctttgcaactgtgaaatggcc
tatgcaAGGGAGTTTCATATATTACGTCACAAGGGATCTTTAGCttgttt
ccaaaatattttgttggtGATTTTAGTGATTTATTTCCTGAAAGGTTTGA
AAGAAGTATACTCTATTCATAGAAGTAACATTTAACCCTGGTAATATTTC
CAAAACGTTGCAGTCGTCACActtacaataataaaaaaaacctgTGCGAT
TTGAGAGACTTTGGGAGAACCCttctaaaaaatcacaaatattttcaaag
aggATTGAGGAACTTTTTTGAGTAATCACAttttttgactgcattgatat
aattttgcaatgCCTGTATTTGTATCTGTTCGATGGAGAATTACTATTAA
GCTATTATGGACCCATAAACTTGTAAAAGCTTAGCATCGCTTTTAAAAGC
CCTGtttttttGCGAGAATTTAACCCTTTTGCAGCGCACCACTTTTGATA
ATAGCCAAAATTTTAAgcaattcttttcaaaataaattaacTTTCAAATG
GCGCACCTTGCTTGAACTTGAGAGTTATACAAAGATTTTGGTACCATTTG
AAAGCTCTTTTCATattctttctaaaagcatttgGTTTATACCCCTTAAG
ATGAAGTAATCAGGAGATGTGGCCGAAAGGTAAAATCGACTTTTCAGACC
TTAAATCTACGGTTTTCGCCGTCTAAGGGTTAATTTGACTGTGGGTTTTT
GGTAAAATAACTGTCACAGATTTTACGGGATGAGTTTTTAGTTTCTATTT
ATCTCTGCTGATTTCATTCCTTACCAGGGCGATTATGAAACTGAAGTGAC
ACTAAGTAACTTTTCAGTGTGTTTTTAAAGGAGAGGATAAAATTTCCCTT
TAATATTTCCACCTTAATAAGCTCTAGGGATGAGTTTTTAGATTCCATCG
GGTCTGTGACCCATGGTCGCATCTTAAACTTGtgttaaataaatattttt
attgatttaatttttttaccaaggcAATTACGAAGCTAAAGTGACATTGA
GTAATCTTTTAGTGTCGTTTTCAAAATAGAGGATGAAATTTCACTTTGAT
ATTCCAACCTTAACAAGCTCCAGGGATGAGTTTTTAGATTCCATCGGGTC
TGTGACCCATGGTCGTATTTTAAAAGGACTTGTGTTAAATGATGAAGTGA
GTACAGTTtctcttctgaccagccaccagaactgttgaaaaaccaacgga
tccggcgagactcaAACTCACCACCATGCCATtttcattgtaatacataa
gggcaaAATTCATGATTGTGTTGAATGAAGATTTACATTGATTTCTTTCC
TTACCAGGGCGATTACGAAGCTAAAGTGACCCTAAGTAATGGATCAACTG
TTTTGGCTTGTTATGATTTCAAAGTTTCCTTGAAAGCAAATAGCCAAGAT
GAACAATACCATAACGACGTCGAAATTACCGTTTAAAGATCCGATTCGCT
TAAAAATGTTGTCGTAAAGGGCTATATACACTACACAattatattgtcag
gcaatataatgacgatatattgctgaataccggcaatatattgaaaaaat
gttCGCAATACATTGTCAATTCGATTCGCAATATTCTcgaatattccaac
aataaaggggattgtttatagaaagaaaattcctttttataatagtacac
atgttgtttacttcgtacattacggtccgcaaaccatattgttgaatatt
gttcgtcaatatattgtgtagtctaagtagctcTTAAGGACTGATAGATA
TCttgttttataaaattttttcttaatttcatttttcatccacatagtaa
tatttttAGATCTAAAATGTgttattttacaaaataaaacgAAATTTAGA
GTATTTTTAATCTAACCTCGTCTCTACGACGATTTGCCTTTTTATATATA
GGATGTCCATcaaagttataaaaaaagtgaGCACCAGTCCCTGGGAACGA
GGTTATGTA Coding sequence (CDS) from alignment at sc0000116_pilon:428178..434036+ >MSTRG.14106.1.p1 ID=MSTRG.14106.1.p1|Name=MSTRG.14106.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3210bp|location=Sequence derived from alignment at sc0000116_pilon:428178..434036+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaagattgCTTTTGTTTTGGCAGCCCTGGTGGCTGTTTGCTTTGCTGC
ACCACAAaGAGTTGAGGTGGAGCGAATCCCAATGATCAAATTAGTCAAAT
CATCTAAAATTCAAAGAAGCAACAACTTGGGTTTCAGTTATTCTAACTGT
GCTGAAGGCTCTGACTTGAACATCAAATCATTGAGCATTTCTCCAGATCC
AATCACCATCCCAGGAAACGTAACCATCGGGTTAGATGCTGCGATCAGTA
CCGAGATCACCGACATTACATCTGCCGCTCTTGTTCTTAAACGCAAAATC
TTTGGTGTCTTTGTTGAAATTCCATGCGTTGATAATCTCGGATCATGCAC
TTACAACGATGTCTGTTCTTTATTGGCTAAAATCGAATGTCCCCAACAAT
TGATAGACATGGGGTTCAAATGCCATTGTCCATTCCCTGCAAAAGAGTTC
AACGTACCTGCTGGAACTGTTATTGCATTACCAAAGCTTCCATTACCATC
ATTTGCCGAAAATGGCGATTACGAAGCTAAAGTGACCCTAAGTAATGGAT
CAACTGTTTTGGCTTGTTATGATTTCAAAGTTTCCTTGAAAGCAAATAGC
CAAGATGAACAATACCATAACGACGTCGAAATTACCGTTTAAatgaagat
tgCTTTTGTTTTGGCAGCCCTGGTGGCTGTTTGCTTTGCTGCACCACAAa
GAGTTGAGGTGGAGCGAATCCCAATGATCAAATTAGTCAAATCATCTAAA
ATTCAAAGAAGCAACAACTTGGGTTTCAGTTATTCTAACTGTGCTGAAGG
CTCTGACTTGAACATCAAATCATTGAGCATTTCTCCAGATCCAATCACCA
TCCCAGGAAACGTAACCATCGGGTTAGATGCTGCGATCAGTACCGAGATC
ACCGACATTACATCTGCCGCTCTTGTTCTTAAACGCAAAATCTTTGGTGT
CTTTGTTGAAATTCCATGCGTTGATAATCTCGGATCATGCACTTACAACG
ATGTCTGTTCTTTATTGGCTAAAATCGAATGTCCCCAACAATTGATAGAC
ATGGGGTTCAAATGCCATTGTCCATTCCCTGCAAAAGAGTTCAACGTACC
TGCTGGAACTGTTATTGCATTACCAAAGCTTCCATTACCATCATTTGCCG
AAAATGGCGATTACGAAGCTAAAGTGACCCTAAGTAATGGATCAACTGTT
TTGGCTTGTTATGATTTCAAAGTTTCCTTGAAAGCAAATAGCCAAGATGA
ACAATACCATAACGACGTCGAAATTACCGTTTAAatgaagattgCTTTTG
TTTTGGCAGCCCTGGTGGCTGTTTGCTTTGCTGCACCACAAaGAGTTGAG
GTGGAGCGAATCCCAATGATCAAATTAGTCAAATCATCTAAAATTCAAAG
AAGCAACAACTTGGGTTTCAGTTATTCTAACTGTGCTGAAGGCTCTGACT
TGAACATCAAATCATTGAGCATTTCTCCAGATCCAATCACCATCCCAGGA
AACGTAACCATCGGGTTAGATGCTGCGATCAGTACCGAGATCACCGACAT
TACATCTGCCGCTCTTGTTCTTAAACGCAAAATCTTTGGTGTCTTTGTTG
AAATTCCATGCGTTGATAATCTCGGATCATGCACTTACAACGATGTCTGT
TCTTTATTGGCTAAAATCGAATGTCCCCAACAATTGATAGACATGGGGTT
CAAATGCCATTGTCCATTCCCTGCAAAAGAGTTCAACGTACCTGCTGGAA
CTGTTATTGCATTACCAAAGCTTCCATTACCATCATTTGCCGAAAATGGC
GATTACGAAGCTAAAGTGACCCTAAGTAATGGATCAACTGTTTTGGCTTG
TTATGATTTCAAAGTTTCCTTGAAAGCAAATAGCCAAGATGAACAATACC
ATAACGACGTCGAAATTACCGTTTAAatgaagattgCTTTTGTTTTGGCA
GCCCTGGTGGCTGTTTGCTTTGCTGCACCACAAaGAGTTGAGGTGGAGCG
AATCCCAATGATCAAATTAGTCAAATCATCTAAAATTCAAAGAAGCAACA
ACTTGGGTTTCAGTTATTCTAACTGTGCTGAAGGCTCTGACTTGAACATC
AAATCATTGAGCATTTCTCCAGATCCAATCACCATCCCAGGAAACGTAAC
CATCGGGTTAGATGCTGCGATCAGTACCGAGATCACCGACATTACATCTG
CCGCTCTTGTTCTTAAACGCAAAATCTTTGGTGTCTTTGTTGAAATTCCA
TGCGTTGATAATCTCGGATCATGCACTTACAACGATGTCTGTTCTTTATT
GGCTAAAATCGAATGTCCCCAACAATTGATAGACATGGGGTTCAAATGCC
ATTGTCCATTCCCTGCAAAAGAGTTCAACGTACCTGCTGGAACTGTTATT
GCATTACCAAAGCTTCCATTACCATCATTTGCCGAAAATGGCGATTACGA
AGCTAAAGTGACCCTAAGTAATGGATCAACTGTTTTGGCTTGTTATGATT
TCAAAGTTTCCTTGAAAGCAAATAGCCAAGATGAACAATACCATAACGAC
GTCGAAATTACCGTTTAAatgaagattgCTTTTGTTTTGGCAGCCCTGGT
GGCTGTTTGCTTTGCTGCACCACAAaGAGTTGAGGTGGAGCGAATCCCAA
TGATCAAATTAGTCAAATCATCTAAAATTCAAAGAAGCAACAACTTGGGT
TTCAGTTATTCTAACTGTGCTGAAGGCTCTGACTTGAACATCAAATCATT
GAGCATTTCTCCAGATCCAATCACCATCCCAGGAAACGTAACCATCGGGT
TAGATGCTGCGATCAGTACCGAGATCACCGACATTACATCTGCCGCTCTT
GTTCTTAAACGCAAAATCTTTGGTGTCTTTGTTGAAATTCCATGCGTTGA
TAATCTCGGATCATGCACTTACAACGATGTCTGTTCTTTATTGGCTAAAA
TCGAATGTCCCCAACAATTGATAGACATGGGGTTCAAATGCCATTGTCCA
TTCCCTGCAAAAGAGTTCAACGTACCTGCTGGAACTGTTATTGCATTACC
AAAGCTTCCATTACCATCATTTGCCGAAAATGGCGATTACGAAGCTAAAG
TGACCCTAAGTAATGGATCAACTGTTTTGGCTTGTTATGATTTCAAAGTT
TCCTTGAAAGCAAATAGCCAAGATGAACAATACCATAACGACGTCGAAAT
TACCGTTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000116_pilon | genome | sc0000116_pilon:428178..434036 + |
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