MSTRG.14104.1.p1 (mRNA) -

Overview
NameMSTRG.14104.1.p1
Unique NameMSTRG.14104.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000116_pilon:336165..337169+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14104.1.p1 ID=MSTRG.14104.1.p1|Name=MSTRG.14104.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1005bp|location=Sequence derived from alignment at sc0000116_pilon:336165..337169+ (Clytia hemisphaerica_ch_hm2_pilon)
ATTGGATCTTGAATGTCCAAATCCTGTATCTCTTGATGGAAGAAATTGGA AATCAACCGATCCAAAGTTCTTCCTCTCGTCAACCAAGTACAAACGATCT GACTTTACCATTAACGACAGAGGACAAAAACACATTCATCCAAGCATGTA TTCAGGAATTGGCTTCAAAATCACCAGGATCAAAATTggaacaaactctc aaaaaggtaacttatcaattttattctcaaaactgtaaaaattctttaat acaAGCACAAAGACCTGTATCTaattgaatattttaatttgctaattgaa ttataaaaaatctttaatttcaTTCCCAGACGTTAAAAGATGTTAAAGAA GAAGTCAAAAACTTGGTCAAACAAAACCCACCACCTCATCCAACAATAAA ATGGCTTTTCGGATTAGTTCTTTCGGAGCTCGGTGAAAAAGGTGAACACT CGTTTTTCGAAAAACTCTATTCCATCAAAGATGACCCTGTTCTTGAAGAT ACTGTGATTCTCAGTTCCATCAATTTCCTCACCAATGTCCAAAAGAAATT GCATCAGGAGATTGACGTCCTTCTTTTCTCGTGGaccaaaaaaataatca taGGCGTTGAAATCAAACGGACACTTACTGGAAAAGCTTTTGACCAGTTG AATAAATACCATAAATTGATAGAAGAGAGGTTGAGTGATCAATTGGGACA AGGCTGGACGTACCATCCAGCCATTTTGGTTGAAAAGGACGACCTTTCTT TTAACAATCAACATTATATTGACCAAGAAACAGATTTGAAATGTTGGTTA TCCAACTTGCTTGCAAAATATCCGACCGTTCCCTCTGGAATACCTTACAT CCCAGCAGTAAATCAAGTTAAAGACCTCCTAAGAATCGTTGTGTTTGCAA TTCATGCTTCAAAAACAGCACCCATTACAACGTCAAACTGGGTCGAGTAT ATCTCGCAAGCCATCGATACCGTCTGCACTACTGACAACATACTCTTTTA CAGTC

Coding sequence (CDS) from alignment at sc0000116_pilon:336165..337169+

>MSTRG.14104.1.p1 ID=MSTRG.14104.1.p1|Name=MSTRG.14104.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1758bp|location=Sequence derived from alignment at sc0000116_pilon:336165..337169+ (Clytia hemisphaerica_ch_hm2_pilon)
TGGATCTTGAATGTCCAAATCCTGTATCTCTTGATGGAAGAAATTGGAAA
TCAACCGATCCAAAGTTCTTCCTCTCGTCAACCAAGTACAAACGATCTGA
CTTTACCATTAACGACAGAGGACAAAAACACATTCATCCAAGCATGTATT
CAGGAATTGGCTTCAAAATCACCAGGATCAAAATTggaacaaactctcaa
aaagACGTTAAAAGATGTTAAAGAAGAAGTCAAAAACTTGGTCAAACAAA
ACCCACCACCTCATCCAACAATAAAATGGCTTTTCGGATTAGTTCTTTCG
GAGCTCGGTGAAAAAGGTGAACACTCGTTTTTCGAAAAACTCTATTCCAT
CAAAGATGACCCTGTTCTTGAAGATACTGTGATTCTCAGTTCCATCAATT
TCCTCACCAATGTCCAAAAGAAATTGCATCAGGAGATTGACGTCCTTCTT
TTCTCGTGGaccaaaaaaataatcataGGCGTTGAAATCAAACGGACACT
TACTGGAAAAGCTTTTGACCAGTTGAATAAATACCATAAATTGATAGAAG
AGAGGTTGAGTGATCAATTGGGACAAGGCTGGACGTACCATCCAGCCATT
TTGGTTGAAAAGGACGACCTTTCTTTTAACAATCAACATTATATTGACCA
AGAAACAGATTTGAAATGTTGGTTATCCAACTTGCTTGCAAAATATCCGA
CCGTTCCCTCTGGAATACCTTACATCCCAGCAGTAAATCAAGTTAAAGAC
CTCCTAAGAATCGTTGTGTTTGCAATTCATGCTTCAAAAACAGCACCCAT
TACAACGTCAAACTGGGTCGAGTATATCTCGCAAGCCATCGATACCGTCT
GCACTACTGACAACATACTCTTTTACAGTTGGATCTTGAATGTCCAAATC
CTGTATCTCTTGATGGAAGAAATTGGAAATCAACCGATCCAAAGTTCTTC
CTCTCGTCAACCAAGTACAAACGATCTGACTTTACCATTAACGACAGAGG
ACAAAAACACATTCATCCAAGCATGTATTCAGGAATTGGCTTCAAAATCA
CCAGGATCAAAATTggaacaaactctcaaaaagACGTTAAAAGATGTTAA
AGAAGAAGTCAAAAACTTGGTCAAACAAAACCCACCACCTCATCCAACAA
TAAAATGGCTTTTCGGATTAGTTCTTTCGGAGCTCGGTGAAAAAGGTGAA
CACTCGTTTTTCGAAAAACTCTATTCCATCAAAGATGACCCTGTTCTTGA
AGATACTGTGATTCTCAGTTCCATCAATTTCCTCACCAATGTCCAAAAGA
AATTGCATCAGGAGATTGACGTCCTTCTTTTCTCGTGGaccaaaaaaata
atcataGGCGTTGAAATCAAACGGACACTTACTGGAAAAGCTTTTGACCA
GTTGAATAAATACCATAAATTGATAGAAGAGAGGTTGAGTGATCAATTGG
GACAAGGCTGGACGTACCATCCAGCCATTTTGGTTGAAAAGGACGACCTT
TCTTTTAACAATCAACATTATATTGACCAAGAAACAGATTTGAAATGTTG
GTTATCCAACTTGCTTGCAAAATATCCGACCGTTCCCTCTGGAATACCTT
ACATCCCAGCAGTAAATCAAGTTAAAGACCTCCTAAGAATCGTTGTGTTT
GCAATTCATGCTTCAAAAACAGCACCCATTACAACGTCAAACTGGGTCGA
GTATATCTCGCAAGCCATCGATACCGTCTGCACTACTGACAACATACTCT
TTTACAGT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14104MSTRG.14104Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14104.1.p1.exon1MSTRG.14104.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14104.1.p1.exon2MSTRG.14104.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14104.1.p1MSTRG.14104.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000116_pilongenomesc0000116_pilon:336165..337169 +