MSTRG.14084.1.p2 (mRNA) -

Overview
NameMSTRG.14084.1.p2
Unique NameMSTRG.14084.1.p2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000115_pilon:1095938..1103709-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14084.1.p2 ID=MSTRG.14084.1.p2|Name=MSTRG.14084.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7772bp|location=Sequence derived from alignment at sc0000115_pilon:1095938..1103709- (Clytia hemisphaerica_ch_hm2_pilon)
AGAGCTAAAAAACATGCCTAAAACTAAAGTCATTGGAAATAGAAGATATT
GTATTCACTGTGAGTCTTCAATCTCACGCTCACATTATTATTCTTTTGGA
CATAACAAAGGATTATGTATTAACATCAAAAAGCATTCAGCCCTGAATAC
CAATAAGCTCCACATTCAAAAGGATCTCGATGGTATTGTTGAAGAAAAAC
ACAATCATCCTGAAGAACAAAAAGAATATCATCAGTCTCCTCTGGAAATC
TTTGATGATGATGGGGATATTGAATTGGCTAATACTAATACTGCTGGTAA
GCTTTTTACATATTATCCATGTGGAAAAAAATCTTGTGTGCTCGTATATC
TTTTTCCTCTTTTCATGGTTTACTCTAGATGTATTATAGATTTCAATCGA
TACCGTGAAAGACCAGATCAATCGAACTTGTCGAACCAATCGAACAATCG
AACTCCATCGAACGATTAAGTTCTTTAATCAAAACTTTTTTGAATCAAAA
TTTTTTGAAAGATTGTGAGTGTTCGATTAAGTTCAATCAATGGGTTTCGG
TTCCATCAGTTTGATTAACCAATTTTGTTTGACAAGTTTGTGCTGCTGCG
CCACCGTATAATAGCTTCGTTTCATTCAAATCAAAGCCAAATTTGCCAGG
CGTAGTTAATCGATATAATAATCGTTAATCTTGAGTAATCTCGATAAAAT
AATCAATAAGTAATCGATGGATTAGATATCAATTAACTGATAGAATCGAT
AGGTAATCGACAGTTAGTCACACTAGGAAATTAAGCTTTCAGAAAAAAAC
AACATCAGTCATCATCTACAGGATGTATTTCAACAACAAGGATGAGGGTT
AACTGAATCAAGTTCAAGATCCCAAGACAATCAATTAAAACTTGCAAACT
TAAAATGAGACAAAATTAACGATTGCGAACATGCAGCAGCCAAAATCAAC
CAACCAAAATTTGTCATTCAATTCCCGAGACAGCGCTTCGATTTTTAAGG
CCTTGTTTATATGCTAAAGTAAAACAATTCCGCACATGTAAAGGGTCATT
GTTTGAGGTCCGGCAAAATTTCCGGGAGATAGCCTATCCGGCGGTGCGCG
GATCTAGGTGGGTTCCGCCTCCCCCGTTGATCTTTTTCTTGAGAAGTTTG
ATCTTCAATTAGTTTTCAAGGTTGGCTTGGCTCAAATTTTTTCATTCTAT
GGCCCAAATTTTTGGCAATTTCTCAAAGTTTTTGAAAATGGTAATTTCAT
TAAAAAACGCCGGGTTATTTTTTCCGAATCCCTTCAGAAGTTTTTGCGGC
GCATTTTTTTGGAGAGTCAAGTAAACGATATAGCGCTTTCGCAGCATTAA
TCTTTGATACGCAATTTGGCGGGACGCTAGTGTGACTAACTGTCTATGGC
TCAAATTTTAGGCAATTTCTCAAAGTTTTTTGAAATGTTATTTTCATTAA
AAAGCGCCGGGTCATTTTTTCAGAATCCCCTTTAGAATTTTGCGGCGCAT
TTTTGCTTAAGAGTCAAGTAAACGATATAGCACTTTCGCGCATTATCTTG
ATACGCATTTTGGCGGAAGCTAGTGTACTAACTGATCGATACTCAAGATT
TTTTCAAAGCTCGATTATTTATCGATCAATTTGTCATCGATTGTTTTATC
AATTATAGATCGATTATACTTCGATTAATTAAGTATGATTAAAAATCGAT
CGACTATCGATCACAGCTTTTGATCGATTACATATCGATCAAAAATTGAT
TATATCGATCAAATAGTTAATCGACCCCACTATCGATTCGTGATCGATTA
TTTATCAGATTTAGGAAGTGGTACTTTAATTGGATTAACTTTCGCCTTCG
CGAGATTAAATTTTTCGATTTCTTGAATTTTCGCGAAATTAAAAGCAACA
TTTTTCGCTGATCTCGATTATGATGTACTTTTGAATTGATCCAATCCCCT
GGTAGCATAGGCCTAGAAAAGTTACTACACTCATTTTTTATAAGCATACG
GTAATTTCGGCTGAAGCATTCTCAAACCCTCTGAAAGGCTGAACAAAAAT
AAAGTTACAAAAAAAAAAAAGGTTACCGATTATTTAGAGAAGGAGAGCAT
ATTAATTCAAAAGCAGGCGTTATTCAAAGTAATAGGATCAGTATGAGATT
TGGCGAATTCCAGAAATTTTATTTACTTCATTAAATACCTTATGCTGGCC
CTTTTACGCAGGACCTTAGCGTTATTTTTGGGCTCGTTGGTGAATAAGAG
CGCGTAAAAAAGGCCGGGTAATGTAGTCAAACGGACTTATTTAGGATAGA
CAAATATCCGGGTACAATAAACATCAAACTGTTAAGTCCGGGAATTGTCG
AAATGGCAATCGCGTCCCAGGACAAAGTTTTTGCAAGCGAGAGAGATATT
AGGATTTAATATCATCGAACTAATCAAACTTTTTACTGAGCAAAACTAAT
CGAACTGCTATTGCTTCAAAAATTGTGAGTGCTCGATTAGTTTGACTATT
TTTTTTAATCGAACTTTAATCGTTCGATGGAGTTCGATTAGTTCGATGTC
GATTGGTTTCGACAAGCTTGATGATCAGTCTGAGTCGGGTTACCTTGCAC
CTGTGCACAGTGGAGGCGCAAACATGCATAGCCACCAAATGACTACAAAT
CAAAGTAGCAAAAATTTCAAAACAAATGAACTATGCAGCTCTCGCGCTCT
ACGCTACCATTTTTTGTTTTGATTTAAGTTTGTATTTTAATGACCAGACA
GGCCATTCATTGAGGGCTATGCATGTTTGAGCCTCCACTGATGCAAGTTA
CCTGACTTCACGGTAGCTGATCGATTGAAAATCAATATTATCTATCGATT
TAATCCAAGTAAGTATTCTATCGATTATGACAGTCTCCAGACAGTGTCAA
TTGAATCAGACGCTGAATCAATTGAACCCAATTGAATACATAAGAATATT
GCAATTCGATTGTCAAACGCATTTGAATATTATGCAGGATTTGCCGTTTG
ATTGCTTCAATTACGTTCGATTGATTTGAGTACGTTCGAATTCAATTGAT
TAGATTGATTCAATTGTATTAGATTGATTATTGATTAGATTATTTCTTTG
TATTTTGCTTTTTACGGTACTTAAGCGCTTGGCTGCCAGGCTAAAAGGGT
CTAAAGGAGTGATCCAATTTAATTGCAATCAAACTCATCGAACATATAAT
CGCAATTATTTGACAGCTATTATCAATTACCATGAGTCAGGTAACTTCAT
CAGTGTAGGGAAACTTGCATAGAATTAAATGACTGATCAATCAAAGCAGC
AAAATGAATTACCACAACTTGGTCAATAGTCTAAATTTTCGTGGATTTGT
TGAATGGAGTGTATTCTCCCATATTAATTATTCACATAATTTATGCAGCA
AAAATGATTGAAAGATTATTGATCTAAATAAATAATGAGAAACCATGGCA
ACCGGAGCTTCATTATTAGTCTTTAATATCTCTGGAAAGAGAATTAAAAA
ATACCTATTATAGCCAGCTAAAATTAAATTCAAAACCAAGTTTATTTTGT
TGTATTTATTCCTTAATAAATGTGTGCAATTTCAGGTTTTTTGGCCATAA
ATATTCGTCATCTGCCAAATTAAGTTCCTTTAAATCTATTTTTTCAATCC
ATGCACAAAATTAAATTCCTGCCAAAATTTCTTCCCTTGATTGGCAACAA
CCATTTGTTTTTTTTTTCCACCTTAGAAAGTTCATCAGCAGATGATGGGT
CAAATTATGACTTCTCAAGCGACTTGGAAAGTGATAGTGAACTTGATGAG
GTAATTTTTAACCATCGATTTTTGCAAAACATTTTAATTCATGATATTCA
TTACGTAATGTTTGTGACGTGATGTTAGACACAAGTTGTATAAAATTTGC
TACTACTGGCAAAAACTGGGGTCTTTCCGTAGAAAACATTACATCATGAA
TATCATGAATATTGTAGATTTTCTCATATATTATTATTATGTCTTCTGTC
CCAATACCAAGTCTTAAAAGACCAAGTCAGGAATTTAATGACTGCCTTTG
TAATTTATTTCTCTCTGATCTACCACAATGATGGAATGGGATAGCTTTAA
TTTTAGATTGGTATTTTATTTGTCATTTCAGATTGACGAGTCAACTGAAA
GTGAGACTGAGGATAGCTCGACACATTCAACACAAACAATTTCTACTTGT
TCAAAATGCTTAATGATGATTCTTCGTGCAATATTTCTTTTTCAAATTCA
TGCTTTCATTTCCAACTCATCAGTTGTATTGCTTCTTGGAATGATCAAGA
CCGTGATAAGTTTAATTTCAACTATAGCCGGGATTGATGTACTTTGTACC
TTTGCCAATGAATTTCCACTGACATTGTATTCAGCCTACAAAAAGGCAGG
GATTAGTGTAGATGACTATGAGACATGGGTTGTTTGTCCTCAGTGCAACA
CCCTCTACAAGTTTGAAAATTGTTTTAAGAAAACCAAAGGAAGCCAAAAA
AAGACAATCAAATCGTGCTCATATACCCCACCCTTCACAAGAGGTGTAAA
ATGTGACACCAAATTATTGAAGGTGCGTTACACAGCAGCAGGAAATACTA
CGTATGTACCAAAGAAAGTATATTGCACAAGAGGCATAGATTCCACCATC
CAAAATTATCTTAAACGTCCCAACTTTAAAAAGCTTCTCCTCGAATCAAA
GGATCAAGTGAGTGAAGATGGTACAATGAATGACATTTATGATGGTAAAA
TTTGGCAAAACTTTAGTAAAGACAAAGGGGAATGGTTTTTTAAAGACAAG
AGAAACTTAGGTTTAATGATGAATATCGATTGGTTTCAGCCATTTACAAA
TTCTGACTATTCACTTGGTGTGATATACATGGTTATCCTGAACCTCCCAA
GAGAAGAGAGGTTCAAATATGAGAACATGATTGTTTGCGGAATCATTCCT
GGTCCCAAAGAGCCTGCAAAGCATGTAAACACCTTTCTGAAACCAATTGT
AGCAGACCTGTTAAAAGGATGGAATGGGGTGATGTTGAAAGATGGTGCGT
TGTTTGGAAAAAGTCTCTACAAGTTTGCCCTTGTTTGCCTCTCAAGTGAT
ATTCCAGCTACAAGGAAATGTTGTGGTTTTCTTGGGTTCTCTGCTAGGAA
GGGTAGGTGCTGAATAGTTTCTTCACTTTTTAGAAAAAAAGTAAAATCCT
TTCCTATTTAAGGATTTAAGTTTTGCAGCAATGAGAATATTGCAATGTGA
ATGTAAATTTTGGCATTCACACCTACATCTGTTTTTTTCTCAACCTTGAA
CATATTTATTCTTATTTTTTTGTGTGGTCAAAATTTCACGAATTAAGGGG
TCCCAAATTTTTCTAGGTCAATTAAATGTGCAGAGATTATTTGTAACAGA
ACCTTGTATGAACTTATTTATTTAGGATGCAGTAAATGTTTTAAGACGTT
TCCCACAAAGAAGTTTGAGAAAAACCGGATTATTCAGGCTTTGACTGCGA
AAATTTCAATTTGAGAACTGGAATGGAACACAAGTTAGCTGCTGGATTAA
TTGAACAATGCAAGACAAAAACAGGAAAAGAGAAGAAAGAAAAACAACTT
GGTGTTAGATTTTCTGAACTATTCGAATTGCCATACTTTGATCCAATCGA
AATGCATGTTATCGATCCCATGCACAACCTCCTCCTAGGTAAGCCATACC
CAGATTAATGACATTAACTAAAAAGTGTTTATCTAGTTAAAAGATGAAAA
TCTGTAAAGTATAAGGAGCTAAAAAAAACAAAGAAACTTGAATTTTTTTG
ACTGATTCGTTAGATATTAGATATTTAGATATCCAATAAATCATTCAAAA
TTTGTCAAAAATATTTAATTTAAACACTTTTAAGTTAAAGTCATTATTTT
ATCTGATTCATCTAATATTATTAGAATGGGAGCTGATTTTTTCCAATACT
TAAGATGCTACTTCCTTCTAATTTTAGTGTTATTCTTTGAATTCTGTTAG
AGGATCTTTCCATTCACAGTTTTGAAAATTTAGTTATATTCTTTTTCTTC
CTACTTAACTGAGGCATCAAAGGTTTAACACAGTATAAAGATCTCTTTCC
TAAATACACATGAGTGAGTTAAGCCAAGTTATGCCATTGTGCCCAAGTTA
GGATGTCATGCATGTTTTTTGATAATACTGCATTGTCTTATTTCATTATT
TAATCACAAAGCATCAATTTCCCTTTTATCTTAGGGACTGGTAAACTCTT
GATAAAGGTATGGTTGAAAACGGGAACGTTGACAGATGATAAACTTGCAA
TCATTGACAGGTTGCAAAGTCATATCAATGTTCCCAGTGGTTATAGCAAG
ATGGCAAGAAAAATATCAAAATATTACAAGCGTTTTAAAGCAGAAGAGTG
TAAAACTTTCCTTCTTTTGTACTCAGTATATTGTTGTAAAAAGTTGATTG
GGCGAAAAAAACTTGAAAATTTATCAAACTTTGTCAATGCATGCAGATTA
CTTTGCCGAAAGTCTGTTACTAAGGAAGACATCAGTCTTGCCCACAATCT
TCTCATTGATTTTTGCAATGGTTTTCAAGAACTATATGGAAAAGAATTTT
GTACTCCAAATATGCATCTTCATTTGCACCTCAAAGATTGCTTGGAAAAT
TTTGGTCCTGTCTATGCTTTTTGGTGCTTCTCATTTGAACGGTATAATGG
AACTCTTGGTCATTACCACACAAACAATTACAACATAATATCAACTTACA
TGAAAAAAATCGTATTACATCAAAGCCTTTCATCTATGGATCACAGCTCG
TACAATTCATTTTTGACACGTGATTCCAGTCAGAATTGTGGAAAGCGCAA
GAGCGCAAGAAAAAGGAGCATTCTTTCAGTGATGACCAACGTAAGCATAT
TGCATCATCTTTATCAGAAGACATGTCGAATCTGTCTTGTTTTTACAAGC
AGTATGACATTTTAAGATTCAATGCGACCAAGTATTCATCAATCGAGCAC
AAAAAAGGTCAATCAGCTGATAGATTTATAATAGTACCACTACTCCACCC
AGAGGATGAAGAGATGGTACTCCGCCCGGGAGAAATATTGAAGATATACG
AAATTCAAACTATTAGCCCTAAATTGGAGACTCATTATGTCGCAGAATGT
CGATGGTTTAGGAAGTTTGATTATCGGGATGAATTTGGTATAGATTGTCC
CTTGAAAGTTTGGGACACTAGTTATGAGCACTGGCAATTCCATACTTATG
TAAAGCTTACTGATATTAAAAGGAAATTTATTTGCATCAAACGAAATTGT
ATTTTCAAAAAGAAGGACAAGGTATACAAACGAAAAAGAACTGTCAGTAA
CACTGTCCATTTTGTATTGAGCCTGTAAAACATGGCTCTTTTTTAATTCT
GTAATTATCATATGTAATGAATTTTCTTATGTGATATGTAGTTTTTGAAC
CAAAGTTACCATCTGGTCTTGACATAGGGGTAAACTAGGTATTTCGGAAA
TATTTTCAACTATAGCTGGGTGGTGTATCTCTTTAAGTCTGTTTGAATTG
CTTCACTTTTCGTTAGCAAATAGCTTGTCTTGTGTGAAGTTATAGATAAT
GAACTGACCAAATGGTAATTTGCAGCATGGTACTGTTATATTTAGCTAAA
TTGTGCAACGAACCCCATGGCCTCCTTAAATGTTTGCATTTATCGGTATT
TTTTTTTTCGAAATGAGAACAGGCTGGAACAGGGGAAATTTTTTTTTCAT
ATACTTACAATTTTTGTTGCTA

Coding sequence (CDS) from alignment at sc0000115_pilon:1095938..1103709-

>MSTRG.14084.1.p2 ID=MSTRG.14084.1.p2|Name=MSTRG.14084.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1794bp|location=Sequence derived from alignment at sc0000115_pilon:1095938..1103709- (Clytia hemisphaerica_ch_hm2_pilon)
GGACTGGTAAACTCTTGATAAAGGTATGGTTGAAAACGGGAACGTTGACA
GATGATAAACTTGCAATCATTGACAGGTTGCAAAGTCATATCAATGTTCC
CAGTGGTTATAGCAAGATGGCAAGAAAAATATCAAAATATTACAAGCGTT
TTAAAGCAGAAGAGTGTAAAACTTTCCTTCTTTTGTACTCAGTATATTGT
TGTAAAAAGTTGATTGGGCGAAAAAAACTTGAAAATTTATCAAACTTTGT
CAATGCATGCAGATTACTTTGCCGAAAGTCTGTTACTAAGGAAGACATCA
GTCTTGCCCACAATCTTCTCATTGATTTTTGCAATGGTTTTCAAGAACTA
TATGGAAAAGAATTTTGTACTCCAAATATGCATCTTCATTTGCACCTCAA
AGATTGCTTGGAAAATTTTGGTCCTGTCTATGCTTTTTGGTGCTTCTCAT
TTGAACGGTATAATGGAACTCTTGGTCATTACCACACAAACAATTACAAC
ATAATATCAACTTACATGAAAAAAATCGTATTACATCAAAGCCTTTCATC
TATGGATCACAGCTCGTACAATTCATTTTTGACACGTGATTCCAGTCAGA
ATTGTGGAAAGCGCAAGAGCGCAAGAAAAAGGAGCATTCTTTCAGTGATG
ACCAACGTAAGCATATTGCATCATCTTTATCAGAAGACATGTCGAATCTG
TCTTGTTTTTACAAGCAGTATGACATTTTAAATGGAACACAAGTTAGCTG
CTGGATTAATTGAACAATGCAAGACAAAAACAGGAAAAGAGAAGAAAGAA
AAACAACTTGGTGTTAGATTTTCTGAACTATTCGAATTGCCATACTTTGA
TCCAATCGAAATGCATGTTATCGATCCCATGCACAACCTCCTCCTAGGGA
CTGGTAAACTCTTGATAAAGGTATGGTTGAAAACGGGAACGTTGACAGAT
GATAAACTTGCAATCATTGACAGGTTGCAAAGTCATATCAATGTTCCCAG
TGGTTATAGCAAGATGGCAAGAAAAATATCAAAATATTACAAGCGTTTTA
AAGCAGAAGAGTGTAAAACTTTCCTTCTTTTGTACTCAGTATATTGTTGT
AAAAAGTTGATTGGGCGAAAAAAACTTGAAAATTTATCAAACTTTGTCAA
TGCATGCAGATTACTTTGCCGAAAGTCTGTTACTAAGGAAGACATCAGTC
TTGCCCACAATCTTCTCATTGATTTTTGCAATGGTTTTCAAGAACTATAT
GGAAAAGAATTTTGTACTCCAAATATGCATCTTCATTTGCACCTCAAAGA
TTGCTTGGAAAATTTTGGTCCTGTCTATGCTTTTTGGTGCTTCTCATTTG
AACGGTATAATGGAACTCTTGGTCATTACCACACAAACAATTACAACATA
ATATCAACTTACATGAAAAAAATCGTATTACATCAAAGCCTTTCATCTAT
GGATCACAGCTCGTACAATTCATTTTTGACACGTGATTCCAGTCAGAATT
GTGGAAAGCGCAAGAGCGCAAGAAAAAGGAGCATTCTTTCAGTGATGACC
AACGTAAGCATATTGCATCATCTTTATCAGAAGACATGTCGAATCTGTCT
TGTTTTTACAAGCAGTATGACATTTTAAATGGAACACAAGTTAGCTGCTG
GATTAATTGAACAATGCAAGACAAAAACAGGAAAAGAGAAGAAAGAAAAA
CAACTTGGTGTTAGATTTTCTGAACTATTCGAATTGCCATACTTTGATCC
AATCGAAATGCATGTTATCGATCCCATGCACAACCTCCTCCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14084MSTRG.14084Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14084.1.p2MSTRG.14084.1.p2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14084.1.p2.exon5MSTRG.14084.1.p2.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14084.1.p2.exon4MSTRG.14084.1.p2.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14084.1.p2.exon3MSTRG.14084.1.p2.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14084.1.p2.exon2MSTRG.14084.1.p2.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14084.1.p2.exon1MSTRG.14084.1.p2.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000115_pilongenomesc0000115_pilon:1095938..1103709 -