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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000115_pilon:393072..395625+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14047.1.p1 ID=MSTRG.14047.1.p1|Name=MSTRG.14047.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2554bp|location=Sequence derived from alignment at sc0000115_pilon:393072..395625+ (Clytia hemisphaerica_ch_hm2_pilon)
ttctgggacttcttttgagacgggggttagacatgaaaacaaagagctaa
gtagaatagtagaatcgactttttttcagtgtaaagtatttttgtaatta
aacattatatttagcaaatatattgaaaagtaatatttcgttataaacaa
agataacttgttcggaaataaaaagtcttcattcttcaacccccggattt
ttcatcgcataatttctacgggaaatcgaaagtaatttcattcggcttgt
gatgtttgagagcttggatgttgggaagctgcaggaataaaggtaaacaa
attatagtcttttttctgaaagaaaaattaacattagtctaggctggctt
aggctgaccaattagtTGGAAGCCAGTTATAATGACCTTTGAATGCAGTT
AATTAAGTGAAATTTTGATCAATTATTGTGGAATTTGAAGTTTTAAGAAG
ATGGATTACAacactgtgaaaaaaatgaaagttaatgagctgaaaagttt
tctCAGACTTCGAGACATGAGACTTTCTGGGAATAAAGAAAACCTCAGAG
CTAGAGTGTTGGTTGCAATTGAAAATGGGGTGAAGCCTGTAAAAACTGCA
GAGGAAATTGAAGGAGAACTGCTCAGAGAATATAATGATAAACTGACATG
CAAAGGTATCTCAATCCCCGATCCATTCAATCTTCAAGATGGTTGGAAAC
CTGAAGCAATTGGAGTCAAGGAGTGGCCAATGATATCAACATTATATATC
ATAAAATTTCTTATGTTGGATGAAACCATCGGAGACTTGAATGACTACAA
GAAGTCTAAAGCATATAGCTATTTCGAGAGAGGATGGCTTGGAAAGATAG
ACTTTTATCCCTTGAAAGACACACCATTTTGTCTGATGAGAACTGATTGC
CGTCCATCACAGAGAATATCAGACACTCTTCATAAACTTTGGCTGCtttt
tttCAAAGGACACAGGAAATGTGCTTGAAGCCCACTGTACATGTATGGCA
GGTATGGGTTCTTCCTGTAATCATGTTGCTGCTGCCTTGTTTCGCATTGA
GGCAGCTATGCGTTATGGTTTGTCAAATCCGTCATCAACATCTCTACCAA
ACGAATGGCTACCTAATCGTAATGAGGTACAACCATCTAAAGCAAAGAAT
ATTGATTTTAATAGGGATGATTTTGCTAAGCGAGGCAAGTCGAGAAAGAA
GCTTTTTAGTACCCCTAAGAAGAATTATCATCCATTAccgataaaaagaa
aaactacaaaaacactatcttttgaaaaaattgtggaaacgctaaaagaa
aaaGACCTAATGAAGGACACCACACTCTCAACAGCAGCTCCTCAACCTGA
GATAGACTTTGTTGTTGAATCTGTAAGAAAACCAGATCACGTTTCAGATT
TACCATGTATTGATGATGTTATTGTTGTTGAATCTGTAAGAAAACCAGAT
CACGTTTCAAATTTACCATGTATTGATGATGTTATTTTAACCTCGAAATC
GACAGATGAATTTCTGACAAATGTTACCAATGATTTGACAAATGATATTA
TTGATAAAATTGAGGTAGCTACTAAAGGACAGAGTACCAATGAACTATGG
TATCAACATAGAAAAAGTGTCATAACTGCTTCTAAAGTGCATGAAGTGAA
AACTAAAATGGAGACTATAATAAAAGGATATCAGAAAGGGGATGAACGAA
GTGAAGTTTTAATGTGGAGTTTAACGaaaaaaaTAGCTGGGTTTACTTTC
TTAAACCCAAATAATCCTGCATTGAAATATGGTAGAGAAATGGAGGGAAT
GGCATCTTCAAAActtcttgattttctaaaaactaAACATAAAGGAGCCA
AAATCAGAGACTGTGGTTTGCTTCTTCACAAGAATAAACCTTTTATTGGA
GCTAGTCCTGATGGCATATTTTCATGTGATTGCTGTAAGGAGGAAGTGTG
TATCGAAATCAAATGTCCGTATTCAATAAGCTACCTTTCCCCGACTGATG
AAAATGCAAAGCTTCGTTACATGATAAAAACTGACCAAGGACTGAGATTG
AGAGAATCTCATCAATATTTCAGCCAGTGTCAATTTCAAATGGGTGTGTG
gaacttgaaaaaatgtttctttttcgtTTATACTGCCCATGGTTTTATAT
TAAATGAAATTAGATttgataccaattttttttctgagttGTCAGAAAAG
TGTAGTAATTTTTATAAAGAATATTATTTACCATCAATTTTCTTAGCTTG
ATATTCTTAAAGGCAAATTATAatcttttgaaacttttggaaGTCTCTAC
ACCCTGTTGAGAATTAAAAAGAAGCaagattcaactttttcaacgaCAAG
ATCCAATTCAAGattcaacttttttattcagtcttttgtttgaaaaataa
gattacaaaaaaaacatttttaaaaaggttttatgtacatgtagtatata
tttttatttttacacattctttccattctttacaggcttttttaattcaa
atttgtcattaatttttcaagaaagttGTCTTTTTATGTTTGTTACTCTT
GGGC Coding sequence (CDS) from alignment at sc0000115_pilon:393072..395625+ >MSTRG.14047.1.p1 ID=MSTRG.14047.1.p1|Name=MSTRG.14047.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1257bp|location=Sequence derived from alignment at sc0000115_pilon:393072..395625+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGGTATGGGTTCTTCCTGTAATCATGTTGCTGCTGCCTTGTTTCG
CATTGAGGCAGCTATGCGTTATGGTTTGTCAAATCCGTCATCAACATCTC
TACCAAACGAATGGCTACCTAATCGTAATGAGGTACAACCATCTAAAGCA
AAGAATATTGATTTTAATAGGGATGATTTTGCTAAGCGAGGCAAGTCGAG
AAAGAAGCTTTTTAGTACCCCTAAGAAGAATTATCATCCATTAccgataa
aaagaaaaactacaaaaacactatcttttgaaaaaattgtggaaacgcta
aaagaaaaaGACCTAATGAAGGACACCACACTCTCAACAGCAGCTCCTCA
ACCTGAGATAGACTTTGTTGTTGAATCTGTAAGAAAACCAGATCACGTTT
CAGATTTACCATGTATTGATGATGTTATTGTTGTTGAATCTGTAAGAAAA
CCAGATCACGTTTCAAATTTACCATGTATTGATGATGTTATTTTAACCTC
GAAATCGACAGATGAATTTCTGACAAATGTTACCAATGATTTGACAAATG
ATATTATTGATAAAATTGAGGTAGCTACTAAAGGACAGAGTACCAATGAA
CTATGGTATCAACATAGAAAAAGTGTCATAACTGCTTCTAAAGTGCATGA
AGTGAAAACTAAAATGGAGACTATAATAAAAGGATATCAGAAAGGGGATG
AACGAAGTGAAGTTTTAATGTGGAGTTTAACGaaaaaaaTAGCTGGGTTT
ACTTTCTTAAACCCAAATAATCCTGCATTGAAATATGGTAGAGAAATGGA
GGGAATGGCATCTTCAAAActtcttgattttctaaaaactaAACATAAAG
GAGCCAAAATCAGAGACTGTGGTTTGCTTCTTCACAAGAATAAACCTTTT
ATTGGAGCTAGTCCTGATGGCATATTTTCATGTGATTGCTGTAAGGAGGA
AGTGTGTATCGAAATCAAATGTCCGTATTCAATAAGCTACCTTTCCCCGA
CTGATGAAAATGCAAAGCTTCGTTACATGATAAAAACTGACCAAGGACTG
AGATTGAGAGAATCTCATCAATATTTCAGCCAGTGTCAATTTCAAATGGG
TGTGTGgaacttgaaaaaatgtttctttttcgtTTATACTGCCCATGGTT
TTATATTAAATGAAATTAGATttgataccaattttttttctgagttGTCA
GAAAAGTGTAGTAATTTTTATAAAGAATATTATTTACCATCAATTTTCTT
AGCTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000115_pilon | genome | sc0000115_pilon:393072..395625 + |
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