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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000115_pilon:279884..282369+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14039.5.p1 ID=MSTRG.14039.5.p1|Name=MSTRG.14039.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2486bp|location=Sequence derived from alignment at sc0000115_pilon:279884..282369+ (Clytia hemisphaerica_ch_hm2_pilon)
AAATGATTACCAAAAAGCCATACCAATTTTCCAGGATGTAGCCGACAAAC
AATCTTCCACTTCAGGTGAAAACGACAAGAATACTCTGAATACCAGATAC
TGCTTGGCTCTATGTTATTACGAACAAAATGATTACCAAAAAGCCATACC
AATCTTCCAGGATGTAGCTGACAAACGAACTTCCACTTTGGGTGAGAACC
ACGAGGATACTCTGAATACCAGATACTGCTTGGCTCTTTGTTATTACGAA
CAAAATGATTACCAAAAAGCCATACCAATTTTCCAGGATGTAGCTGACAA
ACGAACTTCCACTTTAGGTGAAAATGAAGCAGATACTCTGGATACCAGAT
ACTGGTTGGCTCTTCGTCATTACCAGCAAAATGATTACAAAAAAGCCATA
CCAATTTTCCAGGATGTAGCCGAGAAACAATCTTCCACTTTAGGTGAGAA
CCACGAGGATACTCTGAATACCAGATACTGGTTGGCTTTTTGTTATCACC
AACAAAATGATTACCAAAAAGCCATACCAATCTTCCAGGATGTAGCTGAC
AAACGAACTTCCACTTTAGGTGAAAATGAAGCAGATACTCTGGATACCAG
ATACTGGTTGGCTCTTTGTCATTACCAGCAAAATGATTACAAAAAAGCCA
TACCAATTTTCCAGGATGTAGCCGAGAAACAATCTTCCACTTTAGGTGAG
AACCACGAGGATACTCTGAATACCAGATACTGGTTGGCTTTTTGTTATCA
CCAACAAAATGATTACCAAAAAGCCATACCAATCTTCCAGGATGTAGCTG
ACAAACGAACTTCCACTTTGGGTGAGAACCACGAGGATACTCTGAATACC
AGATACTGCTTGGCTCTTTCTTATTTCAAACAAAATGATTACCAAAAAGC
CATACCAATCTTCCAGGATGTAGCCGATAAACGAACTTCCACCATAGGGG
AGAACCACGAGGATACTCTGAATACCAGATACTGGTTGGCTCGTTGTTAT
TACCAACAAAATGATTACCAAAAATCCATACCAATTTTCCAGCATGTAGC
CGACAAACAGTCTTCCACTTTAGGGGAGAACCACAAGGATACTCTGAATA
CCAGATACTGGTTGGCTTTTTGTCATTACCAGCAAAATGATTACAAAAAA
GCCATACCAATTTTCCAGCATGTAGCCGACAAACAGTCTTCCACTTTAGG
GAAGAACCACAAGGATACTCTGAATACCAGACACATGTTGGCTTTTTGTT
ATCACCAACAAAATGATTACCAAAAATCCATACCAATTTTCCAGCATGTA
GCCAACAAACAGTCTTCCACTTTAGGGAAGAACCACAAGGATACTCTGAA
TACCAGATACTGGTTGGCTTTTTGTTATTACGAACAAAATGATTACCAAA
AAGCCATACCAATTTTCCAGCATGTAGCCGACAAACAGTCTTCCACTTTA
GGGAAGAACCACAAGGATACTCTGAATACCAGATACTGGTTGGCTTTTTG
TTATCACCAACAAAATGATTACCAAAAAGCCATACCAATTTTCCAGCATG
TAGCCGACAAACAGTCTTCCACTTTAGGGAAGAACCACAAGGATACTCTG
AATACCAGACACATGTTGGCTTTTTGTTATCACCAACAAAATGATTACCA
AAAAGCCATACCAATTTTCCAGGATGTAGCCGACAAACAAACCTCCACTA
TAGGGGAGAACCACGAGGATACTCTGAATACCAGATACTGGTCGGCTCGT
TGTTATTTCAAACAAAATGATTACCAAAAAGCCATACCAATTTTCCAGGA
TGTAGCTGAGAAACAAACTTCAACTTTGGGTGAGAACGACGCAGATACTC
TGAATACCAGACACATGTTGGCTCGTTgttgttacaaacaaaattaTTAC
CAAAAAGCCATACCAATTTTCCAGGATGTAGCTGAGAAACAATCTTCCAC
TTTGGGTGAGAACGATAAGAATACTCTGAATACCAGATACTGGTTAGCTG
GTTGTTATTTCAAACAAAATGATTACCAAAAAGCCATACTTATACTAGAA
GACGTCTTTAGAAGACAAACCTCAACGTTAGGAGGAAACCACAACCAAAC
TGTTCGAAGCAAGGGACTTTTAAATACTTGCAACGAATTGATTAATTAGT
AAAATAACAATACAttttgacttaatatttttagttttatagttctatag
ttttattgtctttttttgaattatAGTCGAACGTGCACAGCGCCCTGTGT
TTAACTCGAGCAAAAGTTctagccaaatccgaccttttttgaaggcTTCA
GGCTCCCCAAAGAATTTTTGATATGCAggcagacattctcagatttcTAG
CCCGAGCTAAAgggaaaaaattgaagatgagaacataatttttatttact
tttaatcATACATTCCGTCATCATTTTTGTGGTAAAATTTCAGCATTGCT
TATATTCATGTaagcttgcatccgtttttggTTTGG Coding sequence (CDS) from alignment at sc0000115_pilon:279884..282369+ >MSTRG.14039.5.p1 ID=MSTRG.14039.5.p1|Name=MSTRG.14039.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2784bp|location=Sequence derived from alignment at sc0000115_pilon:279884..282369+ (Clytia hemisphaerica_ch_hm2_pilon)
AATGATTACCAAAAAGCCATACCAATTTTCCAGGATGTAGCCGACAAACA
ATCTTCCACTTCAGGTGAAAACGACAAGAATACTCTGAATACCAGATACT
GCTTGGCTCTATGTTATTACGAACAAAATGATTACCAAAAAGCCATACCA
ATCTTCCAGGATGTAGCTGACAAACGAACTTCCACTTTGGGTGAGAACCA
CGAGGATACTCTGAATACCAGATACTGCTTGGCTCTTTGTTATTACGAAC
AAAATGATTACCAAAAAGCCATACCAATTTTCCAGGATGTAGCTGACAAA
CGAACTTCCACTTTAGGGGAGAACCACAAGGATACTCTGAATACCAGATA
CTGGTTGGCTTTTTGTCATTACCAGCAAAATGATTACAAAAAAGCCATAC
CAATTTTCCAGCATGTAGCCGACAAACAGTCTTCCACTTTAGGGAAGAAC
CACAAGGATACTCTGAATACCAGACACATGTTGGCTTTTTGTTATCACCA
ACAAAATGATTACCAAAAATCCATACCAATTTTCCAGCATGTAGCCAACA
AACAGTCTTCCACTTTAGGGAAGAACCACAAGGATACTCTGAATACCAGA
TACTGGTTGGCTTTTTGTTATTACGAACAAAATGATTACCAAAAAGCCAT
ACCAATTTTCCAGCATGTAGCCGACAAACAGTCTTCCACTTTAGGGAAGA
ACCACAAGGATACTCTGAATACCAGATACTGGTTGGCTTTTTGTTATCAC
CAACAAAATGATTACCAAAAAGCCATACCAATTTTCCAGCATGTAGCCGA
CAAACAGTCTTCCACTTTAGGGAAGAACCACAAGGATACTCTGAATACCA
GACACATGTTGGCTTTTTGTTATCACCAACAAAATGATTACCAAAAAGCC
ATACCAATTTTCCAGGATGTAGCCGACAAACAAACCTCCACTATAGGGGA
GAACCACGAGGATACTCTGAATACCAGATACTGGTCGGCTCGTTGTTATT
TCAAACAAAATGATTACCAAAAAGCCATACCAATTTTCCAGGATGTAGCT
GAGAAACAAACTTCAACTTTGGGTGAGAACGACGCAGATACTCTGAATAC
CAGACACATGTTGGCTCGTTgttgttacaaacaaaattaTTACCAAAAAG
CCATACCAATTTTCCAGGATGTAGCTGAGAAACAATCTTCCACTTTGGGT
GAGAACGATAAGAATACTCTGAATACCAGATACTGGTTAGCTGGTTGTTA
TTTCAAACAAAATGATTACCAAAAAGCCATACTTATACTAGAAGACGTCT
TTAGAAGACAAACCTCAACGTTAGGAGGAAACCACAACCAAACTGTTCGA
AGCAAGGGACTTTTAAATACTTGCAACGAATTGATTAATTAGAATGATTA
CCAAAAAGCCATACCAATTTTCCAGGATGTAGCCGACAAACAATCTTCCA
CTTCAGGTGAAAACGACAAGAATACTCTGAATACCAGATACTGCTTGGCT
CTATGTTATTACGAACAAAATGATTACCAAAAAGCCATACCAATCTTCCA
GGATGTAGCTGACAAACGAACTTCCACTTTGGGTGAGAACCACGAGGATA
CTCTGAATACCAGATACTGCTTGGCTCTTTGTTATTACGAACAAAATGAT
TACCAAAAAGCCATACCAATTTTCCAGGATGTAGCTGACAAACGAACTTC
CACTTTAGGGGAGAACCACAAGGATACTCTGAATACCAGATACTGGTTGG
CTTTTTGTCATTACCAGCAAAATGATTACAAAAAAGCCATACCAATTTTC
CAGCATGTAGCCGACAAACAGTCTTCCACTTTAGGGAAGAACCACAAGGA
TACTCTGAATACCAGACACATGTTGGCTTTTTGTTATCACCAACAAAATG
ATTACCAAAAATCCATACCAATTTTCCAGCATGTAGCCAACAAACAGTCT
TCCACTTTAGGGAAGAACCACAAGGATACTCTGAATACCAGATACTGGTT
GGCTTTTTGTTATTACGAACAAAATGATTACCAAAAAGCCATACCAATTT
TCCAGCATGTAGCCGACAAACAGTCTTCCACTTTAGGGAAGAACCACAAG
GATACTCTGAATACCAGATACTGGTTGGCTTTTTGTTATCACCAACAAAA
TGATTACCAAAAAGCCATACCAATTTTCCAGCATGTAGCCGACAAACAGT
CTTCCACTTTAGGGAAGAACCACAAGGATACTCTGAATACCAGACACATG
TTGGCTTTTTGTTATCACCAACAAAATGATTACCAAAAAGCCATACCAAT
TTTCCAGGATGTAGCCGACAAACAAACCTCCACTATAGGGGAGAACCACG
AGGATACTCTGAATACCAGATACTGGTCGGCTCGTTGTTATTTCAAACAA
AATGATTACCAAAAAGCCATACCAATTTTCCAGGATGTAGCTGAGAAACA
AACTTCAACTTTGGGTGAGAACGACGCAGATACTCTGAATACCAGACACA
TGTTGGCTCGTTgttgttacaaacaaaattaTTACCAAAAAGCCATACCA
ATTTTCCAGGATGTAGCTGAGAAACAATCTTCCACTTTGGGTGAGAACGA
TAAGAATACTCTGAATACCAGATACTGGTTAGCTGGTTGTTATTTCAAAC
AAAATGATTACCAAAAAGCCATACTTATACTAGAAGACGTCTTTAGAAGA
CAAACCTCAACGTTAGGAGGAAACCACAACCAAACTGTTCGAAGCAAGGG
ACTTTTAAATACTTGCAACGAATTGATTAATTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000115_pilon | genome | sc0000115_pilon:279884..282369 + |
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