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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000115_pilon:277560..281586+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14039.2.p1 ID=MSTRG.14039.2.p1|Name=MSTRG.14039.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4027bp|location=Sequence derived from alignment at sc0000115_pilon:277560..281586+ (Clytia hemisphaerica_ch_hm2_pilon)
AGGTTTTGGTTTTCTACACATAagttaaaagaaataaaaattgagtGAAG
TAGGAAGCATAGACGATTGTTCAAGATGGCTGCCGCTTCTACATCATCTG
AAAAACTCAATTCTTGTGTAAAAACAGATGTATTTTTATCCCACGATTGG
GGTGAAGATGGTATAACTAATCACAAAAAGGTCGAGAAAATCAACGAGGC
GATCAAAGGATTGGGATATGTGACTTGGTTCGACAATGAACGAATGGTTG
GTAACGTACGAGAACAGATGGCAAACGGAATCCTAAACACCAAATGTTTT
ATTGCTTTCATTACAAAGCATTATCATAACAAAGTGGTCTTCGGTCTTGA
TAAAGATAATTGTCGagctgaatttaattttgccAGCATGAAAGTCCCAA
TGGTTGCTGTACTTCTTGATCCATCGATGAAAAACCCTCATGATTGGAAA
GGGAATCTAGGATTCACACTCGCAACACAATTATATATTGATTTGTCTGG
TGATATCAATGATGAAAAGTATTTGACGAATCAACTCAAACTTCTGAAAA
AAGATTTGACGTCCAAAGGAATCTTCCCAAATAAATTAGAAGAGACAGCG
AATGAATTGAAAGGTAATTTTTGTCTCGTTTTGTAGAAATCGTATCGATA
TAAAGGCCAGCTTTAAGAAAACTAACCACCCAAGAAATTATTGactaaat
tttcttaatttcaacTATAAACATACGagtaaaagtgtgataactggttt
aaCGATTTAACGGATTATCTTTTTGTACGGCCCATTTAAAATGTTGATTT
CATTATATTCACTTTAATTACAAAATCATTTCCCTCCCTTTTCTACGGAA
GCCCATTAGTGCCATTTAGATTTTCCTTTAGTTTTTTAAcgacgaaacta
aaaaaattgacgacaaaactaaaaaattgacaacaaaaataaaaaattga
cgacgaaaatgaaaaattgacgacgaaactgaaaataaattgttactTTG
TTTCGTTGTCgaaaaaattgacaacgaaactaaaaaaattgacgacaaaa
ctaaaaaattgacgacgaaactgaaaataaattgttacttcgtttcgtcg
tcgaaaaaaaTCGACAACGAAACtagaaaatatttgagaatGGTGGCCCT
GGTGGTTGAAAATTAATTCTGGTGGATTATGAAGTGGGATTTGATAGTTC
CGGTGAATGCAATGCTGGTGAAGATGGTTCTTGTGAATGAGATGCTGGTA
ATGATGAACTAGAATAAGGATGTGATGGTGGCCCGGGGATGCTGGCCCGG
GGATGGTGGAGATTGTTGGAATCAACGGTGTCAATGGAATCATTGGAATT
AATCAATagcaaatgatggaatcaatggagcagatgatggaatcaataat
ggagcagatgatggaatcaatggtgcaaatgATGAAATAAATAGAACAGA
TGATGGAATCCATTGTGCGGGTGATGGAACCAACTATTGATTCTATCATT
TGCACCattcatttcatcattgattagtTCCAATGATTTCATTGACACCC
CAGTGACTCCAACATCTCCACTATCACATCCTTATTCTGGTTCATCATTG
CCAGCATCTTATTCACAAGAACCATCTTCACCagcattgcattcaccaga
actatCAAATCCATTTTCAGAATCCACCAGAATCAATaatatttccattt
ttcaaccatcagggccaccattttcaattttttttagttttatagttcga
ttttttcgacgacgaaaagaagtaacaatttattttcagtttcgtcgtca
atttttcagtttcgtcgtcaatttctttagtttcgtcgttAAAAAACTAA
AGGAGAATCTAAATGGCACTAATGGGCTTCCgtacttttttgtttattta
ttcgGTTATTCAATTCGCATTTTACGTTTTTGTGATAAGAACATTCATTC
ATGTTCACGTTATCGATATCTGAAATTACCCGAAAATGCGAAATCTTTCG
GTATCCGAattttcttgtcgaatatctcAAAAATTATTATACTCAAGTCA
ACGCCCCAGTAATAAATATTACGCTTACAGTTTTAGATATTCGATGGGAA
GGCGATCCTTTGGTGAAGAACGCTGTTGAAAATCAAGAAACAATACAGGA
TGAAAGCATTGAGAAATTGAAGGGGAAAGTAAATAATCTACGGAGAAATG
GGGAGTGGGCCGAAGCTATTCCTCTTTATGAAGATATTATTAAGAAACAA
TCTTCCACTTTCGGTGAGAACCACAAGGATACTCTGGATACCAGATACTG
GTTGGCTCTTTGTCATTGCCAGCAAAATGATTACCAAAAAGCCATACCAA
TTTTCCAGGATGTAGCCGACAAACAATCTTCCACTTCAGGTGAAAACGAC
AAGAATACTCTGAATACCAGATACTGCTTGGCTCTATGTTATTACGAACA
AAATGATTACCAAAAAGCCATACCAATCTTCCAGGATGTAGCTGACAAAC
GAACTTCCACTTTGGGTGAGAACCACGAGGATACTCTGAATACCAGATAC
TGCTTGGCTCTTTGTTATTACGAACAAAATGATTACCAAAAAGCCATACC
AATTTTCCAGGATGTAGCTGACAAACGAACTTCCACTTTAGGTGAAAATG
AAGCAGATACTCTGGATACCAGATACTGGTTGGCTCTTCGTCATTACCAG
CAAAATGATTACAAAAAAGCCATACCAATTTTCCAGGATGTAGCCGAGAA
ACAATCTTCCACTTTAGGTGAGAACCACGAGGATACTCTGAATACCAGAT
ACTGGTTGGCTTTTTGTTATCACCAACAAAATGATTACCAAAAAGCCATA
CCAATCTTCCAGGATGTAGCTGACAAACGAACTTCCACTTTAGGTGAAAA
TGAAGCAGATACTCTGGATACCAGATACTGGTTGGCTCTTTGTCATTACC
AGCAAAATGATTACAAAAAAGCCATACCAATTTTCCAGGATGTAGCCGAG
AAACAATCTTCCACTTTAGGTGAGAACCACGAGGATACTCTGAATACCAG
ATACTGGTTGGCTTTTTGTTATCACCAACAAAATGATTACCAAAAAGCCA
TACCAATCTTCCAGGATGTAGCTGACAAACGAACTTCCACTTTGGGTGAG
AACCACGAGGATACTCTGAATACCAGATACTGCTTGGCTCTTTCTTATTT
CAAACAAAATGATTACCAAAAAGCCATACCAATCTTCCAGGATGTAGCCG
ATAAACGAACTTCCACCATAGGGGAGAACCACGAGGATACTCTGAATACC
AGATACTGGTTGGCTCGTTGTTATTACCAACAAAATGATTACCAAAAATC
CATACCAATTTTCCAGCATGTAGCCGACAAACAGTCTTCCACTTTAGGGG
AGAACCACAAGGATACTCTGAATACCAGATACTGGTTGGCTTTTTGTCAT
TACCAGCAAAATGATTACAAAAAAGCCATACCAATTTTCCAGCATGTAGC
CGACAAACAGTCTTCCACTTTAGGGAAGAACCACAAGGATACTCTGAATA
CCAGACACATGTTGGCTTTTTGTTATCACCAACAAAATGATTACCAAAAA
TCCATACCAATTTTCCAGCATGTAGCCAACAAACAGTCTTCCACTTTAGG
GAAGAACCACAAGGATACTCTGAATACCAGATACTGGTTGGCTTTTTGTT
ATTACGAACAAAATGATTACCAAAAAGCCATACCAATTTTCCAGCATGTA
GCCGACAAACAGTCTTCCACTTTAGGGAAGAACCACAAGGATACTCTGAA
TACCAGATACTGGTTGGCTTTTTGTTATCACCAACAAAATGATTACCAAA
AAGCCATACCAATTTTCCAGCATGTAGCCGACAAACAGTCTTCCACTTTA
GGGAAGAACCACAAGGATACTCTGAATACCAGACACATGTTGGCTTTTTG
TTATCACCAACAAAATGATTACCAAAAAGCCATACCAATTTTCCAGGATG
TAGCCGACAAACAAACCTCCACTATAG Coding sequence (CDS) from alignment at sc0000115_pilon:277560..281586+ >MSTRG.14039.2.p1 ID=MSTRG.14039.2.p1|Name=MSTRG.14039.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4806bp|location=Sequence derived from alignment at sc0000115_pilon:277560..281586+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGCCGCTTCTACATCATCTGAAAAACTCAATTCTTGTGTAAAAAC
AGATGTATTTTTATCCCACGATTGGGGTGAAGATGGTATAACTAATCACA
AAAAGGTCGAGAAAATCAACGAGGCGATCAAAGGATTGGGATATGTGACT
TGGTTCGACAATGAACGAATGGTTGGTAACGTACGAGAACAGATGGCAAA
CGGAATCCTAAACACCAAATGTTTTATTGCTTTCATTACAAAGCATTATC
ATAACAAAGTGGTCTTCGGTCTTGATAAAGATAATTGTCGagctgaattt
aattttgccAGCATGAAAGTCCCAATGGTTGCTGTACTTCTTGATCCATC
GATGAAAAACCCTCATGATTGGAAAGGGAATCTAGGATTCACACTCGCAA
CACAATTATATATTGATTTGTCTGGTGATATCAATGATGAAAAGTATTTG
ACGAATCAACTCAAACTTCTGAAAAAAGATTTGACGTCCAAAGGAATCTT
CCCAAATAAATTAGAAGAGACAGCGAATGAATTGAAAGTTTTAGATATTC
GATGGGAAGGCGATCCTTTGGTGAAGAACGCTGTTGAAAATCAAGAAACA
ATACAGGATGAAAGCATTGAGAAATTGAAGGGGAAAGTAAATAATCTACG
GAGAAATGGGGAGTGGGCCGAAGCTATTCCTCTTTATGAAGATATTATTA
AGAAACAATCTTCCACTTTCGGTGAGAACCACAAGGATACTCTGGATACC
AGATACTGGTTGGCTCTTTGTCATTGCCAGCAAAATGATTACCAAAAAGC
CATACCAATTTTCCAGGATGTAGCCGACAAACAATCTTCCACTTCAGGGG
AGAACCACGAGGATACTCTGAATACCAGATACTGGTTGGCTCGTTGTTAT
TACCAACAAAATGATTACCAAAAATCCATACCAATTTTCCAGCATGTAGC
CGACAAACAGTCTTCCACTTTAGGGGAGAACCACAAGGATACTCTGAATA
CCAGATACTGGTTGGCTTTTTGTCATTACCAGCAAAATGATTACAAAAAA
GCCATACCAATTTTCCAGCATGTAGCCGACAAACAGTCTTCCACTTTAGG
GAAGAACCACAAGGATACTCTGAATACCAGACACATGTTGGCTTTTTGTT
ATCACCAACAAAATGATTACCAAAAATCCATACCAATTTTCCAGCATGTA
GCCAACAAACAGTCTTCCACTTTAGGGAAGAACCACAAGGATACTCTGAA
TACCAGATACTGGTTGGCTTTTTGTTATTACGAACAAAATGATTACCAAA
AAGCCATACCAATTTTCCAGCATGTAGCCGACAAACAGTCTTCCACTTTA
GGGAAGAACCACAAGGATACTCTGAATACCAGATACTGGTTGGCTTTTTG
TTATCACCAACAAAATGATTACCAAAAAGCCATACCAATTTTCCAGCATG
TAGCCGACAAACAGTCTTCCACTTTAGGGAAGAACCACAAGGATACTCTG
AATACCAGACACATGTTGGCTTTTTGTTATCACCAACAAAATGATTACCA
AAAAGCCATACCAATTTTCCAGGATGTAGCCGACAAACAAACCTCCACTA
TAATGGCTGCCGCTTCTACATCATCTGAAAAACTCAATTCTTGTGTAAAA
ACAGATGTATTTTTATCCCACGATTGGGGTGAAGATGGTATAACTAATCA
CAAAAAGGTCGAGAAAATCAACGAGGCGATCAAAGGATTGGGATATGTGA
CTTGGTTCGACAATGAACGAATGGTTGGTAACGTACGAGAACAGATGGCA
AACGGAATCCTAAACACCAAATGTTTTATTGCTTTCATTACAAAGCATTA
TCATAACAAAGTGGTCTTCGGTCTTGATAAAGATAATTGTCGagctgaat
ttaattttgccAGCATGAAAGTCCCAATGGTTGCTGTACTTCTTGATCCA
TCGATGAAAAACCCTCATGATTGGAAAGGGAATCTAGGATTCACACTCGC
AACACAATTATATATTGATTTGTCTGGTGATATCAATGATGAAAAGTATT
TGACGAATCAACTCAAACTTCTGAAAAAAGATTTGACGTCCAAAGGAATC
TTCCCAAATAAATTAGAAGAGACAGCGAATGAATTGAAAGTTTTAGATAT
TCGATGGGAAGGCGATCCTTTGGTGAAGAACGCTGTTGAAAATCAAGAAA
CAATACAGGATGAAAGCATTGAGAAATTGAAGGGGAAAGTAAATAATCTA
CGGAGAAATGGGGAGTGGGCCGAAGCTATTCCTCTTTATGAAGATATTAT
TAAGAAACAATCTTCCACTTTCGGTGAGAACCACAAGGATACTCTGGATA
CCAGATACTGGTTGGCTCTTTGTCATTGCCAGCAAAATGATTACCAAAAA
GCCATACCAATTTTCCAGGATGTAGCCGACAAACAATCTTCCACTTCAGG
GGAGAACCACGAGGATACTCTGAATACCAGATACTGGTTGGCTCGTTGTT
ATTACCAACAAAATGATTACCAAAAATCCATACCAATTTTCCAGCATGTA
GCCGACAAACAGTCTTCCACTTTAGGGGAGAACCACAAGGATACTCTGAA
TACCAGATACTGGTTGGCTTTTTGTCATTACCAGCAAAATGATTACAAAA
AAGCCATACCAATTTTCCAGCATGTAGCCGACAAACAGTCTTCCACTTTA
GGGAAGAACCACAAGGATACTCTGAATACCAGACACATGTTGGCTTTTTG
TTATCACCAACAAAATGATTACCAAAAATCCATACCAATTTTCCAGCATG
TAGCCAACAAACAGTCTTCCACTTTAGGGAAGAACCACAAGGATACTCTG
AATACCAGATACTGGTTGGCTTTTTGTTATTACGAACAAAATGATTACCA
AAAAGCCATACCAATTTTCCAGCATGTAGCCGACAAACAGTCTTCCACTT
TAGGGAAGAACCACAAGGATACTCTGAATACCAGATACTGGTTGGCTTTT
TGTTATCACCAACAAAATGATTACCAAAAAGCCATACCAATTTTCCAGCA
TGTAGCCGACAAACAGTCTTCCACTTTAGGGAAGAACCACAAGGATACTC
TGAATACCAGACACATGTTGGCTTTTTGTTATCACCAACAAAATGATTAC
CAAAAAGCCATACCAATTTTCCAGGATGTAGCCGACAAACAAACCTCCAC
TATAATGGCTGCCGCTTCTACATCATCTGAAAAACTCAATTCTTGTGTAA
AAACAGATGTATTTTTATCCCACGATTGGGGTGAAGATGGTATAACTAAT
CACAAAAAGGTCGAGAAAATCAACGAGGCGATCAAAGGATTGGGATATGT
GACTTGGTTCGACAATGAACGAATGGTTGGTAACGTACGAGAACAGATGG
CAAACGGAATCCTAAACACCAAATGTTTTATTGCTTTCATTACAAAGCAT
TATCATAACAAAGTGGTCTTCGGTCTTGATAAAGATAATTGTCGagctga
atttaattttgccAGCATGAAAGTCCCAATGGTTGCTGTACTTCTTGATC
CATCGATGAAAAACCCTCATGATTGGAAAGGGAATCTAGGATTCACACTC
GCAACACAATTATATATTGATTTGTCTGGTGATATCAATGATGAAAAGTA
TTTGACGAATCAACTCAAACTTCTGAAAAAAGATTTGACGTCCAAAGGAA
TCTTCCCAAATAAATTAGAAGAGACAGCGAATGAATTGAAAGTTTTAGAT
ATTCGATGGGAAGGCGATCCTTTGGTGAAGAACGCTGTTGAAAATCAAGA
AACAATACAGGATGAAAGCATTGAGAAATTGAAGGGGAAAGTAAATAATC
TACGGAGAAATGGGGAGTGGGCCGAAGCTATTCCTCTTTATGAAGATATT
ATTAAGAAACAATCTTCCACTTTCGGTGAGAACCACAAGGATACTCTGGA
TACCAGATACTGGTTGGCTCTTTGTCATTGCCAGCAAAATGATTACCAAA
AAGCCATACCAATTTTCCAGGATGTAGCCGACAAACAATCTTCCACTTCA
GGGGAGAACCACGAGGATACTCTGAATACCAGATACTGGTTGGCTCGTTG
TTATTACCAACAAAATGATTACCAAAAATCCATACCAATTTTCCAGCATG
TAGCCGACAAACAGTCTTCCACTTTAGGGGAGAACCACAAGGATACTCTG
AATACCAGATACTGGTTGGCTTTTTGTCATTACCAGCAAAATGATTACAA
AAAAGCCATACCAATTTTCCAGCATGTAGCCGACAAACAGTCTTCCACTT
TAGGGAAGAACCACAAGGATACTCTGAATACCAGACACATGTTGGCTTTT
TGTTATCACCAACAAAATGATTACCAAAAATCCATACCAATTTTCCAGCA
TGTAGCCAACAAACAGTCTTCCACTTTAGGGAAGAACCACAAGGATACTC
TGAATACCAGATACTGGTTGGCTTTTTGTTATTACGAACAAAATGATTAC
CAAAAAGCCATACCAATTTTCCAGCATGTAGCCGACAAACAGTCTTCCAC
TTTAGGGAAGAACCACAAGGATACTCTGAATACCAGATACTGGTTGGCTT
TTTGTTATCACCAACAAAATGATTACCAAAAAGCCATACCAATTTTCCAG
CATGTAGCCGACAAACAGTCTTCCACTTTAGGGAAGAACCACAAGGATAC
TCTGAATACCAGACACATGTTGGCTTTTTGTTATCACCAACAAAATGATT
ACCAAAAAGCCATACCAATTTTCCAGGATGTAGCCGACAAACAAACCTCC
ACTATA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000115_pilon | genome | sc0000115_pilon:277560..281586 + |
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