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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000115_pilon:178266..181161+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14034.1.p1 ID=MSTRG.14034.1.p1|Name=MSTRG.14034.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2896bp|location=Sequence derived from alignment at sc0000115_pilon:178266..181161+ (Clytia hemisphaerica_ch_hm2_pilon)
GTGAAgcctcattttttttcagaaagaaatAAATATTAGAGAGAAAACTC
CAAAAAACGAACAAGACTGAGACTTCAACTTGAATAAAGATGGCATCACC
AAGGCACCAGAGATCTACCATTCATATCACGTTATTGGTCATTCTGTTAG
CTCTCCTCCACCAATCACATTCAAGGCCTTCCTCCTCCTCAAACAGATCA
ACGTTCACCAAAGCTTTGGGTAACAGACAATTCCGTATCTGTAAAGCGAG
GACGTTCTCCTTCTTTTTACATACTGTATGTCTACATTACAGACCAGCAC
GAAACGTCTACAAAAAAGTTGGAATCAGAAAACCCCAAGGTAAGTCTAAT
ATCTATATCTAATAtcttttcgttttattttagcgtcaaaattgggcttt
tccagaaatagtccgtgcccctcccatgttgaggatatcggatatccagg
gggttaacgatttttgagTGGATATCCAAGGTAAAGGGTAAAGTgtattt
tcaagtaaaaaatacgatatattataagagtggatatccagggggacTTT
ACTAAAAAAgaaggatatccagggggttcgatacttcgaaaaatcaatat
cctcaacattgggggtaaaaaactttttctggaaaagcccattattaCGA
TAAGTATATCAAATCTGTTAAAAGCAACAAGATAGTGCGTCGAATCTCCT
ATTTAAGATTTGCATTGCTTTCATACAAACCCTAGATTGACATACGGCCA
GAATTCGaaaaagataaaacgcgaaaataaaagaaaagtgtcagattcaa
tccgtcatccaAAATACCTCTCAAATTTTCTGTCAGCCCAACAATATTTC
GTACCAAATATAAATCTTGaagatttcacaaaaattttaatGAGCTGACA
ATGACATAGAAATCCTTCTTATTTAAGAAAGTCATCATTTAGTTTCATCC
CTGTGGCGACGGTTATTCGATCAAAATACATGATTGTCTTCACTCACTGC
ATCTGACAGCTGGTTCTGATAGTAAACCTTCTTCAAAACACTCAAATGTT
CTGAAAATAGAGATCCAATTAGTCTAAGCCTCGTAACCAAAGTCACTAGC
accacttttgatttttttttgtgagtgatattataataaaaaagcaaatt
ttggAACTGGGTTTGAATTAGTCTACCAAAAAGTAAACAGACACCCAATG
TAGAAATATTTTCCCGATAACGCTAAGGCAGAAAATGTTCAATGGTTGAC
GAGTGCTCTTCTAAGAACTTTAGTGTAGGCGGCCAAGATGAATAAGCAAA
AAgttcaactttaattttttttaataagctttAACGCAAGAAGGTAGGTC
CCTTCCTTCCTTGCTTCCTTCCTGACTCCACCAACGCTCAAACCACTGCA
TATAAGCTTAGTGTGAAATTCGAAACTGTTAAGAGTTACTTAGAGGATTT
ATATTTGACACTTTTAGGCTCTTTTTCTCTTTCCTGACTTATACAAGTTT
ACTTGACCACAGTGTTGTCACAAATGTGTTTTTGTGGTTTTCGAGAGCAA
ACAAAGTCTTCAACAAGACAAACAAAAGAATACTTAAAAAGGGGGCAGGG
TTCAATCTAAAGATGATCTCCCTAGCATGGTTTGTAGTAGACTGTAGAGC
CcacttttagctagattttcttttatgaTTTCGATAGCGTTGTGTCCAGT
AAAATATCAttgccatccagtctatcaacgAAAAGTCATGATTGGCCGCC
GGGCTGAGATTTTAGAAAATGACCACACATGAGCATACACCCACACGGGC
ACGCGTTAAGCGTATTCGCTGATAGCTTGATAAGAATTTCCTTACAGTGA
CCATATATAGTTATTGGAAACCCGGCGTTATCTAGATGGTAGTTGAACTT
TATCTTAACATTACCTGACAAAATTGAATCCCAAATACAACAAATTGAAA
CACTTGAAATACCTATTATTCccttatatattttttgatttcttcaacCT
TAGATAACAACATCCTGGATCGAAAAGAAGCCCGTTCTTTCATCAAGTCA
CGGCGACGTCGCTCAACAGATCAAAACTACATGGACGAATGTTGTGGCCC
TTCCAAACACGGATGCAACGTGAACGAAATTTTCGAATATTGTAATTACG
TCCCATTACCGCAAATCGTCTTaatgagaagaaagaaattCAGCTAAATG
ATTTCCACCGTGATGTGTCTCCAATATTGAGAGATCGATGTTCTTATTAC
TTCTTTATATGGAACGATTTTAGTTTGGTAGAAACGAAAATATGCAAATC
TTGAAACCATGTTCGCAGGTAAcgattccgtttcgctccggaaCGAAATG
AAGTGATTGATTAGAAGTgacataaaaattgaatttaacgAATAGAacgg
cttcattttgtttcggagTGAAACGGAATCGTAGTGTGTAATGCTGGTCT
GAGTTGTGTTCCCTCAAACGTTGGGAAGGAGACAGAACATTCACGAACCA
GATTAATGAAGTCCTTATTGATGAATTAAAACAGGTTATTGGATTTTTTC
TCGCGACAGTAAAACACCGTACCCTGACATACTGAGACGTGTTACGTACA
CAGTAAGGGCCAGGTGTCTTAAGATAAAATCTACAGAGAGACCAATCTTA
GAGACGTTGCTATCAAATGTTTTATGAGAAATAGCCAATTATTCTCTAGG
GTTTTCTAAATCTAAATTCTTAAGTAGAACCAAGTCCAAGTCTAGTCTAA
ATGAAGGAATATTGAGATTTCCTacaatttcaaggttttatgtaacatag
ttttatttattttttacaggcagtagaattttaaattttgtgtaaatatc
atttttttgaCATCCAAACCAAATAATAGAAGAtgaaaaaacacag Coding sequence (CDS) from alignment at sc0000115_pilon:178266..181161+ >MSTRG.14034.1.p1 ID=MSTRG.14034.1.p1|Name=MSTRG.14034.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=888bp|location=Sequence derived from alignment at sc0000115_pilon:178266..181161+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATCACCAAGGCACCAGAGATCTACCATTCATATCACGTTATTGGT
CATTCTGTTAGCTCTCCTCCACCAATCACATTCAAGGCCTTCCTCCTCCT
CAAACAGATCAACGTTCACCAAAGCTTTGGGTAACAGACAATTCCGTATC
TGTAAAGCGAGGACGTTCTCCTTCTTTTTACATACTGTATGTCTACATTA
CAGACCAGCACGAAACGTCTACAAAAAAGTTGGAATCAGAAAACCCCAAG
ATAACAACATCCTGGATCGAAAAGAAGCCCGTTCTTTCATCAAGTCACGG
CGACGTCGCTCAACAGATCAAAACTACATGGACGAATGTTGTGGCCCTTC
CAAACACGGATGCAACGTGAACGAAATTTTCGAATATTGTAATTACGTCC
CATTACCGCAAATCGTCTTaatgagaagaaagaaattCAGCTAAATGGCA
TCACCAAGGCACCAGAGATCTACCATTCATATCACGTTATTGGTCATTCT
GTTAGCTCTCCTCCACCAATCACATTCAAGGCCTTCCTCCTCCTCAAACA
GATCAACGTTCACCAAAGCTTTGGGTAACAGACAATTCCGTATCTGTAAA
GCGAGGACGTTCTCCTTCTTTTTACATACTGTATGTCTACATTACAGACC
AGCACGAAACGTCTACAAAAAAGTTGGAATCAGAAAACCCCAAGATAACA
ACATCCTGGATCGAAAAGAAGCCCGTTCTTTCATCAAGTCACGGCGACGT
CGCTCAACAGATCAAAACTACATGGACGAATGTTGTGGCCCTTCCAAACA
CGGATGCAACGTGAACGAAATTTTCGAATATTGTAATTACGTCCCATTAC
CGCAAATCGTCTTaatgagaagaaagaaattCAGCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000115_pilon | genome | sc0000115_pilon:178266..181161 + |
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