MSTRG.14019.3.p1 (mRNA) -

Overview
NameMSTRG.14019.3.p1
Unique NameMSTRG.14019.3.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000115_pilon:23231..24670+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14019.3.p1 ID=MSTRG.14019.3.p1|Name=MSTRG.14019.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1440bp|location=Sequence derived from alignment at sc0000115_pilon:23231..24670+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGTTGATGATTTAAGCGGTTTGGAGCAATGTCTTTTCGACGAGTTTGGT ATTACACACGAGGAGTACATGAAAGAACATATTTCTTTCGTAAGTAATTA ATCTTTCTCATCCCCAGTCTCTTTCTGCATATGATATGATTCCAGAAAAT CTCTGTACATGCAGGgtcatgggggtggaggatatagtgtccgggggtag tgaaaaatctacaaaatttgcgctgtccggggggtaaacttgctctgttt gaggatAATTTTGCTCGGTTGGAGGGTTATtttgaatttccagggggtca actgatgcttgtccgggggatCAGACCTGCTgtcggaggggggggtcaga aagACACAATGTCCAAggggtaaatttctaaaaaatgttatatcctccac cctccatattcaaattttttctggaaaagcccaatcatGATATGTGACAA CTTATAaataatttaaaggttttatttttacatccCGGTTCATATCTGAC GCATGTTTTATATCatgacagtgtctgcctattgttttatcatgctgtta tatgtttttcttttcttctttctgaccaatcttgctccacatccgtgtca atctaatgtaaaaagacattgaattaaaattgatgaataaaccaacgata tcactcttatttaaaaaaacctttaagctATTTTAAGGGAAGACATTTTG GTCGATTGAACGGATTTACCCTGAATTCCCGgcgaaatttcttttttccg ccaccGCCGAATCGAATCCTCGCTGATCTCGCCGATTTAATCTATTcagt atattttcaaaatttgtgctATTTTAACGGTTTAACATTGTTAAACAATG ATTTTTGGCCAAGAAACCGGTAATTTAAATTCCTGTAAAATGTAATTTTC TCGCCATCCGTCAAATTTGAATTCCCTctgaataaatattttcgaCAATc taccaaattaaatttccgtcaaaattttttcctttcaatTTGACATAACT ATAAACTGAAATTTTATCTTTAGATGGTCGTGCACCGCGTTGTTAAGCCT TTCGGGTTTTCGCTTCATATTTAGATCACAGACGGTATGAATGAAGCCAT CCGAGACAAGGTTAACCCAAATACGCTGACGTCAGTAGAAATTGGATCAA TCATAAAAAGCCTCCTTCAAAATCATCAACATCGACAACTTATAGAACTC ATTGATCAAATTATCATCAATCCAAGTTGTCATAGCAATGACGATTTATT TTCTTGCGTCCTCGATAACACTAATATAAGAAAGAAACTTTCCGCGAACA CACTGTGTGTGCTATTCACAAacaattttcgaatgtttgaacAATATTTG CTTGGATTCATAAAAAACATGTTTCAAAAGTACCCGCTGCTTTGTCGTGA TGACGTTAGGATGATTTGTGAGCAGAATCGTCTTTTTGAG

Coding sequence (CDS) from alignment at sc0000115_pilon:23231..24670+

>MSTRG.14019.3.p1 ID=MSTRG.14019.3.p1|Name=MSTRG.14019.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=354bp|location=Sequence derived from alignment at sc0000115_pilon:23231..24670+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATGAAGCCATCCGAGACAAGGTTAACCCAAATACGCTGACGTCAGT
AGAAATTGGATCAATCATAAAAAGCCTCCTTCAAAATCATCAACATCGAC
AACTTATAGAACTCATTGATCAAATTATCATCAATCCAAGTTGTCATAGC
AATGACGATTTATTTTCTTGCGTCCTCGATAACACTAATATAAGAAAGAA
ACTTTCCGCGAACACACTGTGTGTGCTATTCACAAacaattttcgaatgt
ttgaacAATATTTGCTTGGATTCATAAAAAACATGTTTCAAAAGTACCCG
CTGCTTTGTCGTGATGACGTTAGGATGATTTGTGAGCAGAATCGTCTTTT
TGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14019MSTRG.14019Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14019.3.p1.exon1MSTRG.14019.3.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14019.3.p1.exon2MSTRG.14019.3.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14019.3.p1MSTRG.14019.3.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000115_pilongenomesc0000115_pilon:23231..24670 +