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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000114_pilon:999379..1007191+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14010.2.p1 ID=MSTRG.14010.2.p1|Name=MSTRG.14010.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7813bp|location=Sequence derived from alignment at sc0000114_pilon:999379..1007191+ (Clytia hemisphaerica_ch_hm2_pilon)
TTCGTGTATGCATTTTTGGCTTGTCTTCGATGAACAAAGTGTTAATTATC
TTGTTGTTGGAAAATTTACTTGCATTAAGACTTTCAAGGTAAGTTGACAT
TTTTCTACAgcaattttctataaaaaagggAGCAGCAGAGAGTAATATTT
ATTATATATAGTAGTGGGGTTTTACTgtaaatggtgttttttcaaaatat
gtcaaaccAAATCTTTTAAGCTCGACTTACTCGCTtgcgaggggtaaatc
acttgaaaaaaggtgtacgatacttttcgactttttgaattttcatttga
ctttttgacttttttttgacttttatttgactttttgactttttttttac
ttttttcaaactttcattttgactttttccaagaaaaacgcccactgccT
TTGGGCGCCCAACATTTTTCGcccaaatctgtccaaaaacgccaaccgcc
cataaattttgctccacccatccgcccattcaaaaaactttttgactttt
tcaagactttttttaactttttgacttttttctaggaattattaactttt
tctttgactttttgactttatttttgactttttgactttttctttgactt
tttttaaatttttttgactttttttttgactttttgtagaggtgtacgat
aatttttcgagtgatttacccctcgctcGCTtgtaaggtcgcgtttttac
gttttttgtttaaaaaagccttaaaaacgcTGAAATAAATCAGAGAATTT
GACAGGAATATAAATCTAGTGCAAACGTTCATTCTCGATTATCAATGCGT
TTGCGGGGcgttcatagcgacagctacttgctaatTTTACTAGGGGAAGC
CTCGAGCCCtccttaaaatctcaagattgacaagtgctgtgaccttgaaa
ttttgaccagtggtaGATATGGACAATTGAagatgatttaaaaaattttg
gttcgCCACCTGCCTGGTCTGgcctggttggtattttacagaccagaatg
taaacttgaccaaaatcatgtattgactgattgactcttttgactaaaat
ttgttcctgaAGGCTGATTTATCAAATGAAAGAGAATAGTAACAGAAAAT
TCATTCCCATGACTATTTGGTactttacagaccggtctgtaaaatacact
ttGACCACCTACCATAGCTCAGGAACTACTGGagtttttgacttgaaatt
ttcaccagtaatagatattgaccatctgcgaaaaaaaaattcaatttagt
cacttgagcagttggtattttacagaccggtccgttttttaccaaaaata
ctcactttcagcataaccaCTCATCTGATTTTGCTGTAATTTTAGGTGCA
AGCTTGTATTATCAATACCTAACACTTATCGAAATTCTaagtcaatagca
ttttccAATCACTAGATACAGTATCCTAGGACTATTTAGGCAAAAAGGGC
AATTTTgggccggtctgtaaaatacacaatacCATCAGGTGGCTAAAAAT
TTACCCTCAGCCCGAAATATTTGGTGCACACTTGCAAAATTCAAGTCAAT
TGGATAAGTATTTCagaagttatcaaaaaaaaaatgaggtGCTCTTTGAC
Ctatttttaatatgttttttaaatattaggagcaagttttaagaacatta
tttttaagtctcgaaaacactcgatttcgtaagaaaatagacaaaaacac
tcaaaatgtagtgaaaataagaatatattgagaacattttgaggcttgaa
actcaaaaatttaggaATAtccaaaagcttaaaaaatttgGTATGTTCTT
ACACCGGGTTGTTTGACGGTTTCCTTGGACCCACCAATAGTCCCATGATC
TTCATTCGACTTAATTTAGGTAGAATAGGGTCTAAACTTAAATTTAGATG
TATTACTTTGTGAATTTTGATAATTAGTTGAAAAGTTATTCTCAATTGAA
GTAAAAATATCATGCCATGAAACTATTCAGGACTTTGCCCGAGAAAAGCA
AAGAAGGTCATAATTTATTAATATCGCCCCCAAAAACGAATTTTTGATTA
TCTTACACGATCATCCTCCTAATTTTCTTCAGAAAtattcttttgttgtt
tttctataGGTCCGGGAATAATGGCAGAGCAAATTAACGATGAGATGGCT
AGCCATGAGGATAGAGGTAAGTTGGTTTAATGAAGAGTTTCCTTGTAGCC
TGTACAAGACACAAATGGTTCTGCTTATTATAACTTTCGTACAATACTGC
CATCAAACTTCAAAGGTCTACTTTTTTGTACAATTTACTTTTATTGTACT
TAGGGTACAGAGTCAGTTTTTCTACCTGCCATGTACGTGTACTTTACAAA
TTTGactttagaacgccatgttTTCTgcgtattgggcttttccagaaaaa
aatcgtgcaccccctgttgaggaggttcaTTTcggttccaagggggtaag
gtttgaaatgcagtggaattccatgataagggtagacgaaaatccgtcaa
aaataagcggaattcaaAGGgagtaatgattgaaaatttctaattcggaa
ttccagaggggtatgatcctaaaatggcctggaattccaagggggtaggt
cacaaaaggttggacctcctcaacaggggatgcacggttttttttctgga
aaagcccattgagaaaacttgaaaatccctcaatacattgaaaaaaaaaa
cagcagcGCGCTATCAGTAGGTGATTTTCCAAGTCATGGTGTGAGCCAGA
TTTTTTGTCTTCCTTAATATTAGGAAGTTGCGCTCGAtacaaaggaaaaa
attttcaattccaaggttggaaattcaatatttttgggttggaaattttg
gttttataattgaaggttggaaatttgagcgattaccttaagctgatttg
gaaaacgtaaattacccataggttttgtagaataaaccaatgcccttgaa
aaatcaagtaaaaaaacGCATATAGAAATGACAATTTCCCAAGGCtcgtt
ggaaaacatgactttttgggtgggaaatttttattttccaaacagtttgg
gaattgaaaaaaatgacaaaaatccatgtgaaaatacttatttttgtaaa
tttgatacttcgggttgaaaaactagactttttgggtcggaaatttgtgt
ttcttccaaacagtttggaaaacgttaaaaatccatgtggaagttacatt
tttctaagattgagaccctttcatggaaaactagactttttgggttggaa
atttgtgtttctccaaacagtttggaaaacattaaaaatccatgtggaaa
ttacgcttttgtaaacattttctgtgcatgtcctttgagaaaaccacaag
cgatttttcgctcaaaactgttttggtgtatagctaacctagatgttagg
ctataatgtgagcagtcaagctgtaagtttccgtcaggtgaggcgtctct
tcggagcggccttggttaatcgcagtgagttcatagggtacttgtgtcgt
agtttcaaatagtgccctgctgagctgtgtgagtgatctaagatcaacca
cgtatctgtgcgaacaataacgagagattgaccgggagccatcgagccta
ggctagcgaattcacaaaaacaaaaaccttgtttaagatgtctttttcca
catctctgccatcactttttggattttggctttattcaacctggattttt
gaaaattccaagtttgtttattactttggattttggcttttttccacctg
gattttcgaaaattctaaccttgttaaatttggattttggcttttttcca
actgaattttaaaaaattccaaaattttttcctgtgatataTTTCTTATC
CATTCTGACAAGAGATTGGTGGTAAGGGATAcagctttaaaaaaatctcg
AGTATCGAtcctttgaattatttttctttgatctTTTTTCGATCGAACCC
CTATCGATCTTCTAATGAGATGTTGGAACCGATTGATAGGGGATCGATTA
GTAATCGATAAAGGGATCAATAGGTTATTATCgactagcctagaaatcta
agctagtttgattcagtcactaggataaatctgatggtaagttgtgactg
aataactaaggcaaacttaaaatccgtacatataaaaaaatctttaaagc
gccgaaaccgctatattgccattagccgtgtgtcctagccttgtgaataa
ggcttagttaactaggctaattATCGACggGAttAtCGATCACATTTCAA
TCCGTTATCGATCTGCTTTTATAtcatcgatcctatcgagcccAACAGCT
AGTTTATTAACGCCTATTTCAATAGGAAATCGtcctttttatcaaaaatt
tcgaaaaatttgtttGCCCTTTTTGTAACAAAGAGACCTTAGATTTTTCT
TAATAGGACTTTTATTAAAGACTTCCTTTTATTCTTCAATGTATAAATTT
CTCCAAACCTCTTGTGTAACCTTATCCCAAAGCCCTACACTATAACACCC
AGATGGGAcacaaacattgtttcaacgtttatctaatgttcacaacgttc
aTATATTACGTTAGCTGAACGTTGGAACAACGTTGTATGCAAGGGTTGCC
CACCCACCCTTATGAtaatttttgattctttttatttacagCACACATGA
TAACAAATTTCGAAAAGCTCATTTTTGGCACCAACGACGAAGGAAATCAA
CAAGCAGATGAGAAGAAAGAAATCAACATCGTCCTTCTTGGTGAAACTGG
CGTCGGGAAATCAACCTGGGTTAACTCCTTTTTCAACTACTTACTTCATG
AATCATTTGAGGAAGCTGACCGTAAAGGGGTAGTTTTCGCGCCAGCTTTC
ACAAGATTTATTCATGACATTGATGATGACACCGTTCTTATCAAAGCTGG
CGTTTAAGAAAATTTAACCCCACAATTTGCTAACGGCGACAATGCAGCTT
CTGCAACTATGTTTCCTTTACCGTATGAATTGCACTCCAGAAATGGTGAG
AAAGTTTTCCGAATTATCGACACTCCGGGACTGAACTCAACTAAAGGAGA
GAccaatgatgaaaaagaatCGAAAAAACAGGATCAAGAAAACATCACCT
ACATTCTAAACCTCATCGGACGTTTGAAGATTGAtgcttttatcattttg
ttgAAACCGCAAGAGCGAAAACTTGATTCAGCTTTTACGAATTCTTTCAA
AACTATCTTCAAACAACTTGATTCGTCTGCCAAGAATAACGTCATCTTTG
GACTAACCCATGCCGAAAATGGTAATTGGAAGGACCTTTCAACACTGAAT
ACACTCAAGAAGTTCTTCACAAGTAACAACATAGACCTAGACATTGATAA
AAAGAGGAACGTTTTCTACTTTGATAACTCTCCTTTCAGATATCTTACAA
TTAGAACTGTCAACCCTGGGGACGACGCTGAGGATCAGGACAAAATGGTG
GAATATTGGAATCGATCCGTGGAAAGTTGCCACAAAATGCTGACTTATAT
CAAGGGCTTAGAAGGATATGAAGCAAAAAGTCTTGAAGCTATCAATGATT
GCCGAGCCATGATTGAGCAAATGACCAAAGCTATGGTTAGAATTTCTCAG
GTTACTGAGGAAAATCTAAATGAGCTAACAAATGAACTCAAAAACTACGA
ATCTGCTAATTCGACAAAAGTCGTCCAAATCCGTGAGAAAGTGCTTACGT
TCAAGCGCTTAGATCAAGCAATAACAGTGTGCACCAATCCCTGCTGtttt
aaaagaatgaaaatgtttgaaaatgagAAGATAGTTTACCAGGATGTATA
CAAGCCGTTTTGTTGCGAGGGATGTACTCTCTCCTGGGTTGCTCACTCTG
GCTGGTATTACGGACGTTGGTTTTGTAGTATGATGGATAAATATGGAAAT
TGTAAGGTATGTAAACATCATATGTCTGAGCATCTTAATATCAAGGAAGA
GCTCAAAGAAGCAACCGAAGAGATCAAAATGAAGCTCAGTGATatcaaag
agagaaaaaatgctctaaaaatggaatTCGGTGCTATCATCCATAatctt
gtaattttttctcgATTTCTCAAACACAATACCCTGTTTAGCGACCAGGA
ATTCGTCGAATCTTGTATTGCAAAAGAGATGGATGTCGAATCTAAAGACT
TGGGCAGAGAAGAGGCGGAGCAGCAATCAATTATGgagaaaattgaagaa
tatgCTGACAAAGACCTAATGAAAGAAGGAAAGTTCATTGATGAGCAGGA
AAACATTATCGCTGAAACTCGTCAAGGATTATCCCTTCTTCAAGACATCA
AAAACACGAGGGAAGCTATTGCTGATAAGGCTCTTGATGTATCTGGAGCA
TACAAAGATGTTGAAATTTCAGATCTGGTCAAACAATTGAAAACGTTGAA
TAATCGTCTTAGGCCCATCTTGCAAGAGAAAAACCTTACCAAAGGGGAAT
ATTTCCTATCACTTACCCAAAGAAAGAATGAGGCTGAAACGAAATTGGAA
GAATTGAGGAGGAATCCAGAAGCTGAGCTAGAGGAGTCCAAAAGGTTTTG
cagggaaaagaaaaaaacaatacaaGCTTTGAAGAACATGACAAACAAAT
ATAAAGAAAGTCTAGAAAAGAACGCCACCCCACCAGAGGACCTGACACCG
GAAAAAATTGAGGAAGGAATCAGAAAGTTATCAGCATTACCCTTTTATGG
AAATACTTTTAAGGAGATTTATgacaatataaaagaaacaaagagaATGG
GTTTAGATAAAATCGCtgagaaaatctttaaaattggtATTGATATTTTG
AAACGTATACCAAAACGATTTCGACCAAAACTAGCAAGAGAAAATTAAAC
AAGACTATCTAGACTATCGTTCATCATCCCGTTATATTGTAAACAAGATA
CTTAAAagttcattcaattttttcccATCGTGTGGAAACCGCTCTGGAGA
GGATAACTCTTGATTGCGCTGGTTTCCACTTGGTAGCTGAAAAGAGTGCA
CATTTAAAGCGATACGACTTTTAAAAGGGTGTTTGTAAATAGTTATTAAA
ACTAGCATGTAATCTTGCATAACGTTCCTAATATTTCTTATACAGTTTTT
GATCTTATTTTAAACTTATAAAGCTAGGACCAGTCTTCTCAACTTACGTA
TTTTTTAGTATTTGTATAGTATATATTATGTAATGTCTTTATAAAACTAG
GATTTTTTACGGTATCAAGTTTTTAAGGGTGTTCTTATAGTGCGTTATTG
CCAATCagaattacacgtttttttataagaacaaagcaATATAGGAACAT
GAGGCTTTGCAATCTACCTAAGACACGCAATTTCTTAAGAAGTATACTCA
ACAAAGGctcaaattaagaacatatttaggTTTAAAAGCCAAGCAAAGTA
AGTACACCCGAAGTCgctattttctaatttttaacgTTCTCATAAGGAAA
AAGGTGTATATAACGAGTTCAATTAAggataatttttcaatttatttaca
TGTTACaagaatttgaaattggtattTGGCTCTTTCTTGTATATCTGAAG
CACCTTGTCatttatttaattcaaaattattgaagttaattgattattga
ttatgattatgattttttagtatttgtataatatattataaaatgtcttt
attaAACTAGGATCTTTTACGGTATCAAGTTTTAAGGGTGTTCTTATAGT
GCGCTATTGCCAATCAGAATTACacgttctttataagaacaaagctatat
aagaacatgaggctttcGAGGCTTTGCAATCTACCTAAGACACGCAATTT
CTTAAGAAGTATA Coding sequence (CDS) from alignment at sc0000114_pilon:999379..1007191+ >MSTRG.14010.2.p1 ID=MSTRG.14010.2.p1|Name=MSTRG.14010.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1890bp|location=Sequence derived from alignment at sc0000114_pilon:999379..1007191+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTCCTTTACCGTATGAATTGCACTCCAGAAATGGTGAGAAAGTTTT
CCGAATTATCGACACTCCGGGACTGAACTCAACTAAAGGAGAGAccaatg
atgaaaaagaatCGAAAAAACAGGATCAAGAAAACATCACCTACATTCTA
AACCTCATCGGACGTTTGAAGATTGAtgcttttatcattttgttgAAACC
GCAAGAGCGAAAACTTGATTCAGCTTTTACGAATTCTTTCAAAACTATCT
TCAAACAACTTGATTCGTCTGCCAAGAATAACGTCATCTTTGGACTAACC
CATGCCGAAAATGGTAATTGGAAGGACCTTTCAACACTGAATACACTCAA
GAAGTTCTTCACAAGTAACAACATAGACCTAGACATTGATAAAAAGAGGA
ACGTTTTCTACTTTGATAACTCTCCTTTCAGATATCTTACAATTAGAACT
GTCAACCCTGGGGACGACGCTGAGGATCAGGACAAAATGGTGGAATATTG
GAATCGATCCGTGGAAAGTTGCCACAAAATGCTGACTTATATCAAGGGCT
TAGAAGGATATGAAGCAAAAAGTCTTGAAGCTATCAATGATTGCCGAGCC
ATGATTGAGCAAATGACCAAAGCTATGGTTAGAATTTCTCAGGTTACTGA
GGAAAATCTAAATGAGCTAACAAATGAACTCAAAAACTACGAATCTGCTA
ATTCGACAAAAGTCGTCCAAATCCGTGAGAAAGTGCTTACGTTCAAGCGC
TTAGATCAAGCAATAACAGTGTGCACCAATCCCTGCTGttttaaaagaat
gaaaatgtttgaaaatgagAAGATAGTTTACCAGGATGTATACAAGCCGT
TTTGTTGCGAGGGATGTACTCTCTCCTGGGTTGCTCACTCTGGCTGGTAT
TACGGACGTTGGTTTTGTAGTATGATGGATAAATATGGAAATTGTAAGGT
ATGTAAACATCATATGTCTGAGCATCTTAATATCAAGGAAGAGCTCAAAG
AAGCAACCGAAGAGATCAAAATGAAGCTCAGTGATatcaaagagagaaaa
aatgctctaaaaatggaatTCGGTGCTATCATCCATAatcttgtaatttt
ttctcgATTTCTCAAACACAATACCCTGTTTAGCGACCAGGAATTCGTCG
AATCTTGTATTGCAAAAGAGATGGATGTCGAATCTAAAGACTTGGGCAGA
GAAGAGGCGGAGCAGCAATCAATTATGgagaaaattgaagaatatgCTGA
CAAAGACCTAATGAAAGAAGGAAAGTTCATTGATGAGCAGGAAAACATTA
TCGCTGAAACTCGTCAAGGATTATCCCTTCTTCAAGACATCAAAAACACG
AGGGAAGCTATTGCTGATAAGGCTCTTGATGTATCTGGAGCATACAAAGA
TGTTGAAATTTCAGATCTGGTCAAACAATTGAAAACGTTGAATAATCGTC
TTAGGCCCATCTTGCAAGAGAAAAACCTTACCAAAGGGGAATATTTCCTA
TCACTTACCCAAAGAAAGAATGAGGCTGAAACGAAATTGGAAGAATTGAG
GAGGAATCCAGAAGCTGAGCTAGAGGAGTCCAAAAGGTTTTGcagggaaa
agaaaaaaacaatacaaGCTTTGAAGAACATGACAAACAAATATAAAGAA
AGTCTAGAAAAGAACGCCACCCCACCAGAGGACCTGACACCGGAAAAAAT
TGAGGAAGGAATCAGAAAGTTATCAGCATTACCCTTTTATGGAAATACTT
TTAAGGAGATTTATgacaatataaaagaaacaaagagaATGGGTTTAGAT
AAAATCGCtgagaaaatctttaaaattggtATTGATATTTTGAAACGTAT
ACCAAAACGATTTCGACCAAAACTAGCAAGAGAAAATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000114_pilon | genome | sc0000114_pilon:999379..1007191 + |
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