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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000114_pilon:999333..1007191+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14010.1.p1 ID=MSTRG.14010.1.p1|Name=MSTRG.14010.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7859bp|location=Sequence derived from alignment at sc0000114_pilon:999333..1007191+ (Clytia hemisphaerica_ch_hm2_pilon)
TCTTGTTTTCAAGTAATATATTATCTCATTATCTCTATCAAGGATTTTCG
TGTATGCATTTTTGGCTTGTCTTCGATGAACAAAGTGTTAATTATCTTGT
TGTTGGAAAATTTACTTGCATTAAGACTTTCAAGGTAAGTTGACATTTTT
CTACAgcaattttctataaaaaagggAGCAGCAGAGAGTAATATTTATTA
TATATAGTAGTGGGGTTTTACTgtaaatggtgttttttcaaaatatgtca
aaccAAATCTTTTAAGCTCGACTTACTCGCTtgcgaggggtaaatcactt
gaaaaaaggtgtacgatacttttcgactttttgaattttcatttgacttt
ttgacttttttttgacttttatttgactttttgactttttttttactttt
ttcaaactttcattttgactttttccaagaaaaacgcccactgccTTTGG
GCGCCCAACATTTTTCGcccaaatctgtccaaaaacgccaaccgcccata
aattttgctccacccatccgcccattcaaaaaactttttgactttttcaa
gactttttttaactttttgacttttttctaggaattattaactttttctt
tgactttttgactttatttttgactttttgactttttctttgactttttt
taaatttttttgactttttttttgactttttgtagaggtgtacgataatt
tttcgagtgatttacccctcgctcGCTtgtaaggtcgcgtttttacgttt
tttgtttaaaaaagccttaaaaacgcTGAAATAAATCAGAGAATTTGACA
GGAATATAAATCTAGTGCAAACGTTCATTCTCGATTATCAATGCGTTTGC
GGGGcgttcatagcgacagctacttgctaatTTTACTAGGGGAAGCCTCG
AGCCCtccttaaaatctcaagattgacaagtgctgtgaccttgaaatttt
gaccagtggtaGATATGGACAATTGAagatgatttaaaaaattttggttc
gCCACCTGCCTGGTCTGgcctggttggtattttacagaccagaatgtaaa
cttgaccaaaatcatgtattgactgattgactcttttgactaaaatttgt
tcctgaAGGCTGATTTATCAAATGAAAGAGAATAGTAACAGAAAATTCAT
TCCCATGACTATTTGGTactttacagaccggtctgtaaaatacactttGA
CCACCTACCATAGCTCAGGAACTACTGGagtttttgacttgaaattttca
ccagtaatagatattgaccatctgcgaaaaaaaaattcaatttagtcact
tgagcagttggtattttacagaccggtccgttttttaccaaaaatactca
ctttcagcataaccaCTCATCTGATTTTGCTGTAATTTTAGGTGCAAGCT
TGTATTATCAATACCTAACACTTATCGAAATTCTaagtcaatagcatttt
ccAATCACTAGATACAGTATCCTAGGACTATTTAGGCAAAAAGGGCAATT
TTgggccggtctgtaaaatacacaatacCATCAGGTGGCTAAAAATTTAC
CCTCAGCCCGAAATATTTGGTGCACACTTGCAAAATTCAAGTCAATTGGA
TAAGTATTTCagaagttatcaaaaaaaaaatgaggtGCTCTTTGACCtat
ttttaatatgttttttaaatattaggagcaagttttaagaacattatttt
taagtctcgaaaacactcgatttcgtaagaaaatagacaaaaacactcaa
aatgtagtgaaaataagaatatattgagaacattttgaggcttgaaactc
aaaaatttaggaATAtccaaaagcttaaaaaatttgGTATGTTCTTACAC
CGGGTTGTTTGACGGTTTCCTTGGACCCACCAATAGTCCCATGATCTTCA
TTCGACTTAATTTAGGTAGAATAGGGTCTAAACTTAAATTTAGATGTATT
ACTTTGTGAATTTTGATAATTAGTTGAAAAGTTATTCTCAATTGAAGTAA
AAATATCATGCCATGAAACTATTCAGGACTTTGCCCGAGAAAAGCAAAGA
AGGTCATAATTTATTAATATCGCCCCCAAAAACGAATTTTTGATTATCTT
ACACGATCATCCTCCTAATTTTCTTCAGAAAtattcttttgttgtttttc
tataGGTCCGGGAATAATGGCAGAGCAAATTAACGATGAGATGGCTAGCC
ATGAGGATAGAGGTAAGTTGGTTTAATGAAGAGTTTCCTTGTAGCCTGTA
CAAGACACAAATGGTTCTGCTTATTATAACTTTCGTACAATACTGCCATC
AAACTTCAAAGGTCTACTTTTTTGTACAATTTACTTTTATTGTACTTAGG
GTACAGAGTCAGTTTTTCTACCTGCCATGTACGTGTACTTTACAAATTTG
actttagaacgccatgttTTCTgcgtattgggcttttccagaaaaaaatc
gtgcaccccctgttgaggaggttcaTTTcggttccaagggggtaaggttt
gaaatgcagtggaattccatgataagggtagacgaaaatccgtcaaaaat
aagcggaattcaaAGGgagtaatgattgaaaatttctaattcggaattcc
agaggggtatgatcctaaaatggcctggaattccaagggggtaggtcaca
aaaggttggacctcctcaacaggggatgcacggttttttttctggaaaag
cccattgagaaaacttgaaaatccctcaatacattgaaaaaaaaaacagc
agcGCGCTATCAGTAGGTGATTTTCCAAGTCATGGTGTGAGCCAGATTTT
TTGTCTTCCTTAATATTAGGAAGTTGCGCTCGAtacaaaggaaaaaattt
tcaattccaaggttggaaattcaatatttttgggttggaaattttggttt
tataattgaaggttggaaatttgagcgattaccttaagctgatttggaaa
acgtaaattacccataggttttgtagaataaaccaatgcccttgaaaaat
caagtaaaaaaacGCATATAGAAATGACAATTTCCCAAGGCtcgttggaa
aacatgactttttgggtgggaaatttttattttccaaacagtttgggaat
tgaaaaaaatgacaaaaatccatgtgaaaatacttatttttgtaaatttg
atacttcgggttgaaaaactagactttttgggtcggaaatttgtgtttct
tccaaacagtttggaaaacgttaaaaatccatgtggaagttacatttttc
taagattgagaccctttcatggaaaactagactttttgggttggaaattt
gtgtttctccaaacagtttggaaaacattaaaaatccatgtggaaattac
gcttttgtaaacattttctgtgcatgtcctttgagaaaaccacaagcgat
ttttcgctcaaaactgttttggtgtatagctaacctagatgttaggctat
aatgtgagcagtcaagctgtaagtttccgtcaggtgaggcgtctcttcgg
agcggccttggttaatcgcagtgagttcatagggtacttgtgtcgtagtt
tcaaatagtgccctgctgagctgtgtgagtgatctaagatcaaccacgta
tctgtgcgaacaataacgagagattgaccgggagccatcgagcctaggct
agcgaattcacaaaaacaaaaaccttgtttaagatgtctttttccacatc
tctgccatcactttttggattttggctttattcaacctggatttttgaaa
attccaagtttgtttattactttggattttggcttttttccacctggatt
ttcgaaaattctaaccttgttaaatttggattttggcttttttccaactg
aattttaaaaaattccaaaattttttcctgtgatataTTTCTTATCCATT
CTGACAAGAGATTGGTGGTAAGGGATAcagctttaaaaaaatctcgAGTA
TCGAtcctttgaattatttttctttgatctTTTTTCGATCGAACCCCTAT
CGATCTTCTAATGAGATGTTGGAACCGATTGATAGGGGATCGATTAGTAA
TCGATAAAGGGATCAATAGGTTATTATCgactagcctagaaatctaagct
agtttgattcagtcactaggataaatctgatggtaagttgtgactgaata
actaaggcaaacttaaaatccgtacatataaaaaaatctttaaagcgccg
aaaccgctatattgccattagccgtgtgtcctagccttgtgaataaggct
tagttaactaggctaattATCGACggGAttAtCGATCACATTTCAATCCG
TTATCGATCTGCTTTTATAtcatcgatcctatcgagcccAACAGCTAGTT
TATTAACGCCTATTTCAATAGGAAATCGtcctttttatcaaaaatttcga
aaaatttgtttGCCCTTTTTGTAACAAAGAGACCTTAGATTTTTCTTAAT
AGGACTTTTATTAAAGACTTCCTTTTATTCTTCAATGTATAAATTTCTCC
AAACCTCTTGTGTAACCTTATCCCAAAGCCCTACACTATAACACCCAGAT
GGGAcacaaacattgtttcaacgtttatctaatgttcacaacgttcaTAT
ATTACGTTAGCTGAACGTTGGAACAACGTTGTATGCAAGGGTTGCCCACC
CACCCTTATGAtaatttttgattctttttatttacagCACACATGATAAC
AAATTTCGAAAAGCTCATTTTTGGCACCAACGACGAAGGAAATCAACAAG
CAGATGAGAAGAAAGAAATCAACATCGTCCTTCTTGGTGAAACTGGCGTC
GGGAAATCAACCTGGGTTAACTCCTTTTTCAACTACTTACTTCATGAATC
ATTTGAGGAAGCTGACCGTAAAGGGGTAGTTTTCGCGCCAGCTTTCACAA
GATTTATTCATGACATTGATGATGACACCGTTCTTATCAAAGCTGGCGTT
TAAGAAAATTTAACCCCACAATTTGCTAACGGCGACAATGCAGCTTCTGC
AACTATGTTTCCTTTACCGTATGAATTGCACTCCAGAAATGGTGAGAAAG
TTTTCCGAATTATCGACACTCCGGGACTGAACTCAACTAAAGGAGAGAcc
aatgatgaaaaagaatCGAAAAAACAGGATCAAGAAAACATCACCTACAT
TCTAAACCTCATCGGACGTTTGAAGATTGAtgcttttatcattttgttgA
AACCGCAAGAGCGAAAACTTGATTCAGCTTTTACGAATTCTTTCAAAACT
ATCTTCAAACAACTTGATTCGTCTGCCAAGAATAACGTCATCTTTGGACT
AACCCATGCCGAAAATGGTAATTGGAAGGACCTTTCAACACTGAATACAC
TCAAGAAGTTCTTCACAAGTAACAACATAGACCTAGACATTGATAAAAAG
AGGAACGTTTTCTACTTTGATAACTCTCCTTTCAGATATCTTACAATTAG
AACTGTCAACCCTGGGGACGACGCTGAGGATCAGGACAAAATGGTGGAAT
ATTGGAATCGATCCGTGGAAAGTTGCCACAAAATGCTGACTTATATCAAG
GGCTTAGAAGGATATGAAGCAAAAAGTCTTGAAGCTATCAATGATTGCCG
AGCCATGATTGAGCAAATGACCAAAGCTATGGTTAGAATTTCTCAGGTTA
CTGAGGAAAATCTAAATGAGCTAACAAATGAACTCAAAAACTACGAATCT
GCTAATTCGACAAAAGTCGTCCAAATCCGTGAGAAAGTGCTTACGTTCAA
GCGCTTAGATCAAGCAATAACAGTGTGCACCAATCCCTGCTGttttaaaa
gaatgaaaatgtttgaaaatgagAAGATAGTTTACCAGGATGTATACAAG
CCGTTTTGTTGCGAGGGATGTACTCTCTCCTGGGTTGCTCACTCTGGCTG
GTATTACGGACGTTGGTTTTGTAGTATGATGGATAAATATGGAAATTGTA
AGGTATGTAAACATCATATGTCTGAGCATCTTAATATCAAGGAAGAGCTC
AAAGAAGCAACCGAAGAGATCAAAATGAAGCTCAGTGATatcaaagagag
aaaaaatgctctaaaaatggaatTCGGTGCTATCATCCATAatcttgtaa
ttttttctcgATTTCTCAAACACAATACCCTGTTTAGCGACCAGGAATTC
GTCGAATCTTGTATTGCAAAAGAGATGGATGTCGAATCTAAAGACTTGGG
CAGAGAAGAGGCGGAGCAGCAATCAATTATGgagaaaattgaagaatatg
CTGACAAAGACCTAATGAAAGAAGGAAAGTTCATTGATGAGCAGGAAAAC
ATTATCGCTGAAACTCGTCAAGGATTATCCCTTCTTCAAGACATCAAAAA
CACGAGGGAAGCTATTGCTGATAAGGCTCTTGATGTATCTGGAGCATACA
AAGATGTTGAAATTTCAGATCTGGTCAAACAATTGAAAACGTTGAATAAT
CGTCTTAGGCCCATCTTGCAAGAGAAAAACCTTACCAAAGGGGAATATTT
CCTATCACTTACCCAAAGAAAGAATGAGGCTGAAACGAAATTGGAAGAAT
TGAGGAGGAATCCAGAAGCTGAGCTAGAGGAGTCCAAAAGGTTTTGcagg
gaaaagaaaaaaacaatacaaGCTTTGAAGAACATGACAAACAAATATAA
AGAAAGTCTAGAAAAGAACGCCACCCCACCAGAGGACCTGACACCGGAAA
AAATTGAGGAAGGAATCAGAAAGTTATCAGCATTACCCTTTTATGGAAAT
ACTTTTAAGGAGATTTATgacaatataaaagaaacaaagagaATGGGTTT
AGATAAAATCGCtgagaaaatctttaaaattggtATTGATATTTTGAAAC
GTATACCAAAACGATTTCGACCAAAACTAGCAAGAGAAAATTAAACAAGA
CTATCTAGACTATCGTTCATCATCCCGTTATATTGTAAACAAGATACTTA
AAagttcattcaattttttcccATCGTGTGGAAACCGCTCTGGAGAGGAT
AACTCTTGATTGCGCTGGTTTCCACTTGGTAGCTGAAAAGAGTGCACATT
TAAAGCGATACGACTTTTAAAAGGGTGTTTGTAAATAGTTATTAAAACTA
GCATGTAATCTTGCATAACGTTCCTAATATTTCTTATACAGTTTTTGATC
TTATTTTAAACTTATAAAGCTAGGACCAGTCTTCTCAACTTACGTATTTT
TTAGTATTTGTATAGTATATATTATGTAATGTCTTTATAAAACTAGGATT
TTTTACGGTATCAAGTTTTTAAGGGTGTTCTTATAGTGCGTTATTGCCAA
TCagaattacacgtttttttataagaacaaagcaATATAGGAACATGAGG
CTTTGCAATCTACCTAAGACACGCAATTTCTTAAGAAGTATACTCAACAA
AGGctcaaattaagaacatatttaggTTTAAAAGCCAAGCAAAGTAAGTA
CACCCGAAGTCgctattttctaatttttaacgTTCTCATAAGGAAAAAGG
TGTATATAACGAGTTCAATTAAggataatttttcaatttatttacaTGTT
ACaagaatttgaaattggtattTGGCTCTTTCTTGTATATCTGAAGCACC
TTGTCatttatttaattcaaaattattgaagttaattgattattgattat
gattatgattttttagtatttgtataatatattataaaatgtctttatta
AACTAGGATCTTTTACGGTATCAAGTTTTAAGGGTGTTCTTATAGTGCGC
TATTGCCAATCAGAATTACacgttctttataagaacaaagctatataaga
acatgaggctttcGAGGCTTTGCAATCTACCTAAGACACGCAATTTCTTA
AGAAGTATA Coding sequence (CDS) from alignment at sc0000114_pilon:999333..1007191+ >MSTRG.14010.1.p1 ID=MSTRG.14010.1.p1|Name=MSTRG.14010.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1890bp|location=Sequence derived from alignment at sc0000114_pilon:999333..1007191+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTCCTTTACCGTATGAATTGCACTCCAGAAATGGTGAGAAAGTTTT
CCGAATTATCGACACTCCGGGACTGAACTCAACTAAAGGAGAGAccaatg
atgaaaaagaatCGAAAAAACAGGATCAAGAAAACATCACCTACATTCTA
AACCTCATCGGACGTTTGAAGATTGAtgcttttatcattttgttgAAACC
GCAAGAGCGAAAACTTGATTCAGCTTTTACGAATTCTTTCAAAACTATCT
TCAAACAACTTGATTCGTCTGCCAAGAATAACGTCATCTTTGGACTAACC
CATGCCGAAAATGGTAATTGGAAGGACCTTTCAACACTGAATACACTCAA
GAAGTTCTTCACAAGTAACAACATAGACCTAGACATTGATAAAAAGAGGA
ACGTTTTCTACTTTGATAACTCTCCTTTCAGATATCTTACAATTAGAACT
GTCAACCCTGGGGACGACGCTGAGGATCAGGACAAAATGGTGGAATATTG
GAATCGATCCGTGGAAAGTTGCCACAAAATGCTGACTTATATCAAGGGCT
TAGAAGGATATGAAGCAAAAAGTCTTGAAGCTATCAATGATTGCCGAGCC
ATGATTGAGCAAATGACCAAAGCTATGGTTAGAATTTCTCAGGTTACTGA
GGAAAATCTAAATGAGCTAACAAATGAACTCAAAAACTACGAATCTGCTA
ATTCGACAAAAGTCGTCCAAATCCGTGAGAAAGTGCTTACGTTCAAGCGC
TTAGATCAAGCAATAACAGTGTGCACCAATCCCTGCTGttttaaaagaat
gaaaatgtttgaaaatgagAAGATAGTTTACCAGGATGTATACAAGCCGT
TTTGTTGCGAGGGATGTACTCTCTCCTGGGTTGCTCACTCTGGCTGGTAT
TACGGACGTTGGTTTTGTAGTATGATGGATAAATATGGAAATTGTAAGGT
ATGTAAACATCATATGTCTGAGCATCTTAATATCAAGGAAGAGCTCAAAG
AAGCAACCGAAGAGATCAAAATGAAGCTCAGTGATatcaaagagagaaaa
aatgctctaaaaatggaatTCGGTGCTATCATCCATAatcttgtaatttt
ttctcgATTTCTCAAACACAATACCCTGTTTAGCGACCAGGAATTCGTCG
AATCTTGTATTGCAAAAGAGATGGATGTCGAATCTAAAGACTTGGGCAGA
GAAGAGGCGGAGCAGCAATCAATTATGgagaaaattgaagaatatgCTGA
CAAAGACCTAATGAAAGAAGGAAAGTTCATTGATGAGCAGGAAAACATTA
TCGCTGAAACTCGTCAAGGATTATCCCTTCTTCAAGACATCAAAAACACG
AGGGAAGCTATTGCTGATAAGGCTCTTGATGTATCTGGAGCATACAAAGA
TGTTGAAATTTCAGATCTGGTCAAACAATTGAAAACGTTGAATAATCGTC
TTAGGCCCATCTTGCAAGAGAAAAACCTTACCAAAGGGGAATATTTCCTA
TCACTTACCCAAAGAAAGAATGAGGCTGAAACGAAATTGGAAGAATTGAG
GAGGAATCCAGAAGCTGAGCTAGAGGAGTCCAAAAGGTTTTGcagggaaa
agaaaaaaacaatacaaGCTTTGAAGAACATGACAAACAAATATAAAGAA
AGTCTAGAAAAGAACGCCACCCCACCAGAGGACCTGACACCGGAAAAAAT
TGAGGAAGGAATCAGAAAGTTATCAGCATTACCCTTTTATGGAAATACTT
TTAAGGAGATTTATgacaatataaaagaaacaaagagaATGGGTTTAGAT
AAAATCGCtgagaaaatctttaaaattggtATTGATATTTTGAAACGTAT
ACCAAAACGATTTCGACCAAAACTAGCAAGAGAAAATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000114_pilon | genome | sc0000114_pilon:999333..1007191 + |
|
