MSTRG.14.1.p1 (mRNA) -

Overview
NameMSTRG.14.1.p1
Unique NameMSTRG.14.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000001_pilon:178371..180047+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14.1.p1 ID=MSTRG.14.1.p1|Name=MSTRG.14.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1677bp|location=Sequence derived from alignment at sc0000001_pilon:178371..180047+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtctgGCTGTATTCACTGctgtttcttatttttcatttcagatatATC
AGTTACTAATCacaacaaaataaaccaaaatttaTATAAAGTGATATCAC
AAATGGAATCGTTAGATTTGTTaccaaatgaaattttgaaaatggtattA
TGCTCTTTGGATTTGAAAAGTGCCCAAAAATTTTCTCTCACTTCAAAGAG
GATAAACAAACTGACATTGTCAAAACTTTGGTCAAAACCAAGATATACAA
ACGATTCCAAAAATCTTGAGTTTCTTCACAAGATTTCTCGCTTTCCGATT
CGTGAGCTGCATACTCGAGATTTTAAATGCAATTGGCTCGAAATGGTTGC
TTTGGTACCGCAACTCCAGTTTCTTCATATCGATACATACTACGGCAAAT
TTTACAAACCTGAAAAATCAATGTTACCATTTCTAAAAGTCCCTGTTATT
ATACATACAAATACGTTTGGTATAAAAAGTGAGCaagattttgataaatt
tttggCAATCCTTAGTTCAATTGAAGTGGAGGAGCTGATTATTGATCATG
GCTCCTATTTTTACGACAGTAAAGACCGACAACGTGCCCTTTCCATTGAG
GAATTCAAATTGCTTTCTGAAAGGGTGCGCATATCTGAATTACATGTCAT
TAGTCTTGATTTAAATGAAGAGAATGTCAAAGATTTCATGAAAGTTTTGG
CTTCCATCAAAAACTGCACAGTTATCATGGATAATTTACATCCATCGTAT
TTGTTTACTGTCAAAGACCTGGAATCGATGGTTAAGCTTGATATTAAAAT
CATATTAATTGATACCAGTTGTTTAGCAGTTTCCACTAACCCAGAACTTC
TTAATTTTGTCAAAGTcatgagaaaaatgaaatatcttaAAGAATTTCGA
TTTTGCAATGAAGATTTTAGAGATGAGATTGTTCCTCCTCCTATGGAACA
ACTGACTGATTTACCCTTCAAATCTATTGCAACTGATAATTTCCGAGTTG
AAGAGGGAAAAGTTGGAGATATCGTAAACATCTTATCTCAGATCAAATCG
TTAAAGGAATTGAAAATTCGACCAGATCATCATACTGATTATAAGATGTC
ACCAAGTGATTTTGCTTTATTCAAGGATCTTCCTGTGACAATAACTTTCC
TTTGTTTGGAGGCATTAAATTTAACAAAGGAGAATGAAGTTGAGTTTCGT
CAAATtatgaaacagatgaaaatcACTAACATTCTGTGGTTCGACCGCAA
TTTCGAGGAGCAAGGATTTGAGATTGACATAAAAATTGATGGTGTATACG
AAACTATTTGAAACAGGATGATAGTTTTAGAAGCTCAATCATGCATATTT
TTGGAATCTCTTTTGGTATTTTCTAGTACAATTTCAGAGTTGAATCATTT
TCATGTAAGATAGCAAATTATTCATATATGATTTGAAAGTTTCGCTCAAT
TTATTATACTTCATTAAATATTATCCTacacaaaattgttttttaaggCT
ATGTTCATTTTTTACTAACCTAgtttgataatttgataaagaaattcATA
TTATCatacacctctgtctcacagctccAGTGGAGCTCTTTTCCTCAAAG
CTCAATTTGATTGGTATTCGCCATTTTAGACATCAGATTAAGTATATTTG
ATgagattttgtcattttaattctttt

Coding sequence (CDS) from alignment at sc0000001_pilon:178371..180047+

>MSTRG.14.1.p1 ID=MSTRG.14.1.p1|Name=MSTRG.14.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1311bp|location=Sequence derived from alignment at sc0000001_pilon:178371..180047+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtctgGCTGTATTCACTGctgtttcttatttttcatttcagatatATC
AGTTACTAATCacaacaaaataaaccaaaatttaTATAAAGTGATATCAC
AAATGGAATCGTTAGATTTGTTaccaaatgaaattttgaaaatggtattA
TGCTCTTTGGATTTGAAAAGTGCCCAAAAATTTTCTCTCACTTCAAAGAG
GATAAACAAACTGACATTGTCAAAACTTTGGTCAAAACCAAGATATACAA
ACGATTCCAAAAATCTTGAGTTTCTTCACAAGATTTCTCGCTTTCCGATT
CGTGAGCTGCATACTCGAGATTTTAAATGCAATTGGCTCGAAATGGTTGC
TTTGGTACCGCAACTCCAGTTTCTTCATATCGATACATACTACGGCAAAT
TTTACAAACCTGAAAAATCAATGTTACCATTTCTAAAAGTCCCTGTTATT
ATACATACAAATACGTTTGGTATAAAAAGTGAGCaagattttgataaatt
tttggCAATCCTTAGTTCAATTGAAGTGGAGGAGCTGATTATTGATCATG
GCTCCTATTTTTACGACAGTAAAGACCGACAACGTGCCCTTTCCATTGAG
GAATTCAAATTGCTTTCTGAAAGGGTGCGCATATCTGAATTACATGTCAT
TAGTCTTGATTTAAATGAAGAGAATGTCAAAGATTTCATGAAAGTTTTGG
CTTCCATCAAAAACTGCACAGTTATCATGGATAATTTACATCCATCGTAT
TTGTTTACTGTCAAAGACCTGGAATCGATGGTTAAGCTTGATATTAAAAT
CATATTAATTGATACCAGTTGTTTAGCAGTTTCCACTAACCCAGAACTTC
TTAATTTTGTCAAAGTcatgagaaaaatgaaatatcttaAAGAATTTCGA
TTTTGCAATGAAGATTTTAGAGATGAGATTGTTCCTCCTCCTATGGAACA
ACTGACTGATTTACCCTTCAAATCTATTGCAACTGATAATTTCCGAGTTG
AAGAGGGAAAAGTTGGAGATATCGTAAACATCTTATCTCAGATCAAATCG
TTAAAGGAATTGAAAATTCGACCAGATCATCATACTGATTATAAGATGTC
ACCAAGTGATTTTGCTTTATTCAAGGATCTTCCTGTGACAATAACTTTCC
TTTGTTTGGAGGCATTAAATTTAACAAAGGAGAATGAAGTTGAGTTTCGT
CAAATtatgaaacagatgaaaatcACTAACATTCTGTGGTTCGACCGCAA
TTTCGAGGAGCAAGGATTTGAGATTGACATAAAAATTGATGGTGTATACG
AAACTATTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14MSTRG.14Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14.1.p1.exon1MSTRG.14.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14.1.p1MSTRG.14.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001_pilongenomesc0000001_pilon:178371..180047 +