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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000114_pilon:857747..861006- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13996.1.p1 ID=MSTRG.13996.1.p1|Name=MSTRG.13996.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3260bp|location=Sequence derived from alignment at sc0000114_pilon:857747..861006- (Clytia hemisphaerica_ch_hm2_pilon)
GAATTTGGAAGATTAAAATCTAGATTGATAAAAGGCGATTGATAATATTG
TAAAGCATTTCTTTTCGGTTTTAAACATAGAACTGAGGCTCAAACATTCT
CAAAATACCGATAAAAATATGAGACATATATACACATGAAAGAAGAAAGT
TTTAACAAGTTTTCTTCAAGAAGTTGACCTTCAAGAAGTTCATAGTTAAA
CTTTCTCTGATGTTTCAAAACCACACAGTTTCTATATATGGTTATTCATC
ATAATTTAGTTTACCCTAAACTTAGACAGGTTATTATTAATGAACGAAAG
CACAAGAGGTTCAGAGGAAAAGTAATAGAAAGGTGATGAAAAATTTATAA
AAAATTTAAGAATAACGTTATAAATTATTGAAGTTAATATTTTTTTATAA
GAACATCCAAATCTATTGAAGCCTTGAGATGTTCTTAACTTTTTGAGTTT
TAAGCCTAAAAATGTTCTTAACATGTTCTTATTTTCGCCATTTTTTGAGT
ATTTTTGTCTTTATTTTCCTTTAAGAAATTCAATGTCTCAGAGTCCGCAG
AGTCTTTATAATGTTCTTAACTTTTGGCCATCGAAGCCTTATGTTCTCAT
ATAGTTTGTTCTTATAAAAAAACGTGTAATTTTTTTTTCAAGGAACCTTT
AGAAGAACATCATTTCTATCCTTTCCTCTTTATAGCGTAGCTATGTAGAA
AATAAATTTCTTTTTGAATTACGAATGACACCTTATACCAGTTTGGAGTT
GTGAAGCTTTAATATTTGAAAGGTAAGATATTTTTACAGTTTTACAAATA
CAGTACCATCAGATCACCTCTATCTCTTGTCATTTTACTCGAATAACTAA
AGATCAATACAAAGCTAGAATTTCTAGGAAAGTCGATTGTAGGTCCTTTT
TATTAGAAGAATTAAGGAGAAGTAAGGAGAAGTAAGGAAAGTTATCCATT
GTATTGTTGAAAAAATTTATTTACCCTTCTTGAGTAACTTTTGATCTTAT
AGAACAAAGAAATTGGTGTGGAAAATAGCTTCTCTAGTCGTCAGTATACA
GGCCGAATTTGAGCTGGGGAAATTGACTTGGTGTCAAAATTAGCGTCAAA
ATAGGGAGTCAATTTTACTGACGTCAAATAAATAATTTCCAATTTTTATT
CGAAATCTTCTGCACTTTTTTTCATTCTTCAAGGTATTCTGGAGGAAGGC
AGAGACTCCAGAAAAAAAGAAAAAAACTGAACAAAAAAAATGCCAATAAA
CGAGCTACCCGATTCAATATTATTACAAATCTTTAAAAAATGCGATTCCA
AGACTGGATTATGGAAAGCAAGAAGCGTCTGCAAGCGTTGGTATGTGATC
CTTGCTGACAGTGAGCTCTGGCAGACCTGTGATTTATCACAATTCAACTT
GAATGATGCGTGTATTTTACAGACCATCTTAAACTACATGCCCGTCAAAC
GTTTCAAATCCATCAAAATCAAACAAAACACGATTGAACGAAACATCCTT
AAATCACTCTTAAAACACGCTCGAAGTCTCAATTCATTAACATTACGTCA
TTGTCGGATAACAACACGTGATAATAGCTCGTCCAATCATATACGAGATA
TCCGATCACATGATGCCCAAGCAACCAATCAGATTTTAGAAATACCGTGT
GATTTGAAGCACATTGACTTGAGAAAGACAACAGGAGATACTGAGTTATT
GGTAGATTTGATCACCAAATATGGCGCACAAATTAAAACTTTTGGTAAGT
TTTTTACCTCGACTAAATTTTCATTAATTTTCTTTTCTATGCCAAAGTGA
AGCTCTTGGATACAATTTCTCAAACTCAAATTTCAAGATAGAGAGAAGAC
AGAGCTTTTATGAACTTTTAAAGATATACTACAGTGCATTCTGACAGTCA
AATGAGGATCACCTCAGTTTTCGTCTGAGCTTGGCAAAAGGGATTGGCAA
GTTCAAAAACATCTCAAACCATAAAACTCTACCCAGTCGATCCGTTTCAG
AGCAATTCTCCATAACTCGAACTTTTAGAATTCAAATCTCTCCTTAAGCA
GAGTAAGTTTTCTGGACCAAGTCTTTAACTGGAATCTCCATACCTTGAAC
AACGCTTCGTTCTTTATACATGTTCGAGTTATGGAAGCTCCCGTTGTATC
TCTGGCGAAAGAAAACATTTTTGCTATCATTTTCCCTATAGGTGTTACAT
ACAACTTATCAAAATATTTCGAAAACGATCGATCACTATTCGACTTTCTA
CCTAACATTCATGCATTGGATTTGACTGAAGGATTATGGGTCAATGATGA
AGTCATCAGGGAAATCGCAAAATCGTGTCCTTCGTTGAGATACGTAGGTC
TATCAAAATGTCAAAATATTAGAGGAGCTAGCATGGAGTTCCTTATGAGA
CGGTGCACGAATATTCAGACGCTACTCTTAAGCCGGACAGGCGTCCGAAA
TGAAGAATTGCAGAGAGTGAGATGGGAGAACCTTCCTTTGACTGAACTTG
ATATATCAAATTGTTATTATTTGGATGATACAGCGCTCCATAGAATAATC
AAGACTTTGGCACCACAGCTGACGTATTTGAAATGCATAATGACGAATGA
GTTATTGAAAGAGTTAACCGATTCGCGTCATCATTTTCCACTTAAAAGTT
TCGAGTTACGACGAAGACAAGACTTAGACATGAATCTAGTGACACAATTT
CTTCAAAAATGTAATCAACTGGAGGCGCTAGACACTAGCCTAATTCCTAT
CGAATATGAAACATTTGAGAACATTCTACCATTTTTACCGAAATTGAAAT
GGTTCAATTTTACCGGTAACGAAGACATGCTACGAACTGAAGACCTTTTA
CCGCTCATCGAAAAACATTGCAAATATATTGAAGAAATTGGTATAAATTT
CTATTATTCGCCTTGTAAGGTGGAAAGACTTTTATTGAAAGTCAAGATGA
CGTCACTGAAAAGATTGAATCTTCTAGGATCCAAAATATACGATCTTAAT
AATCGGACAGAAGATACGAAACTCGGACATGGTGTTGTTTTGACGTGTGA
TAAAGAGTACAGTCTACCTTCACCGAGGCTAGATACGTTTGATTCAGAGA
TAGTACAGAATTAACTGATAATTTGACTGATAGTATATAACAGTTATGAT
AATAGATTACCGGATAGTGAAAACAAAGATTTTTGTAATTTATTTTTCAG
TTCATTTAAACCCATTCATATAGAAAACCTGTTGAATTCTGACAAGACAA
GACAAGCAAG Coding sequence (CDS) from alignment at sc0000114_pilon:857747..861006- >MSTRG.13996.1.p1 ID=MSTRG.13996.1.p1|Name=MSTRG.13996.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2856bp|location=Sequence derived from alignment at sc0000114_pilon:857747..861006- (Clytia hemisphaerica_ch_hm2_pilon)
GTGTTACATACAACTTATCAAAATATTTCGAAAACGATCGATCACTATTC
GACTTTCTACCTAACATTCATGCATTGGATTTGACTGAAGGATTATGGGT
CAATGATGAAGTCATCAGGGAAATCGCAAAATCGTGTCCTTCGTTGAGAT
ACGTAGGTCTATCAAAATGTCAAAATATTAGAGGAGCTAGCATGGAGTTC
CTTATGAGACGGTGCACGAATATTCAGACGCTACTCTTAAGCCGGACAGG
CGTCCGAAATGAAGAATTGCAGAGAGTGAGATGGGAGAACCTTCCTTTGA
CTGAACTTGATATATCAAATTGTTATTATTTGGATGATACAGCGCTCCAT
AGAATAATCAAGACTTTGGCACCACAGCTGACGTATTTGAAATGCATAAT
GACGAATGAGTTATTGAAAGAGTTAACCGATTCGCGTCATCATTTTCCAC
TTAAAAGTTTCGAGTTACGACGAAGACAAGACTTAGACATGAATCTAGTG
ACACAATTTCTTCAAAAATGTAATCAACTGGAGGCGCTAGACACTAGCCT
AATTCCTATCGAATATGAAACATTTGAGAACATTCTACCATTTTTACCGA
AATTGAAATGGTTCAATTTTACCGGTAACGAAGACATGCTACGAACTGAA
GACCTTTTACCGCTCATCGAAAAACATTGCAAATATATTGAAGAAATTGG
TATAAATTTCTATTATTCGCCTTGTAAGGTGGAAAGACTTTTATTGAAAG
TCAAGATGACGTCACTGAAAAGATTGAATCTTCTAGGATCCAAAATATAC
GATCTTAATAATCGGACAGAAGATACGAAACTCGGACATGGTGTTGTTTT
GACGTGTGATAAAGAGTACAGTCTACCTTCACCGAGGCTAGATACGTTTG
ATTCAGAGATAGTACAGAATTAAATGCCAATAAACGAGCTACCCGATTCA
ATATTATTACAAATCTTTAAAAAATGCGATTCCAAGACTGGATTATGGAA
AGCAAGAAGCGTCTGCAAGCGTTGGTATGTGATCCTTGCTGACAGTGAGC
TCTGGCAGACCTGTGATTTATCACAATTCAACTTGAATGATGCGTGTATT
TTACAGACCATCTTAAACTACATGCCCGTCAAACGTTTCAAATCCATCAA
AATCAAACAAAACACGATTGAACGAAACATCCTTAAATCACTCTTAAAAC
ACGCTCGAAGTCTCAATTCATTAACATTACGTCATTGTCGGATAACAACA
CGTGATAATAGCTCGTCCAATCATATACGAGATATCCGATCACATGATGC
CCAAGCAACCAATCAGATTTTAGAAATACCGTGTGATTTGAAGCACATTG
ACTTGAGAAAGACAACAGGAGATACTGAGTTATTGGTAGATTTGATCACC
AAATATGGCGCACAAATTAAAACTTTTGGTGTTACATACAACTTATCAAA
ATATTTCGAAAACGATCGATCACTATTCGACTTTCTACCTAACATTCATG
CATTGGATTTGACTGAAGGATTATGGGTCAATGATGAAGTCATCAGGGAA
ATCGCAAAATCGTGTCCTTCGTTGAGATACGTAGGTCTATCAAAATGTCA
AAATATTAGAGGAGCTAGCATGGAGTTCCTTATGAGACGGTGCACGAATA
TTCAGACGCTACTCTTAAGCCGGACAGGCGTCCGAAATGAAGAATTGCAG
AGAGTGAGATGGGAGAACCTTCCTTTGACTGAACTTGATATATCAAATTG
TTATTATTTGGATGATACAGCGCTCCATAGAATAATCAAGACTTTGGCAC
CACAGCTGACGTATTTGAAATGCATAATGACGAATGAGTTATTGAAAGAG
TTAACCGATTCGCGTCATCATTTTCCACTTAAAAGTTTCGAGTTACGACG
AAGACAAGACTTAGACATGAATCTAGTGACACAATTTCTTCAAAAATGTA
ATCAACTGGAGGCGCTAGACACTAGCCTAATTCCTATCGAATATGAAACA
TTTGAGAACATTCTACCATTTTTACCGAAATTGAAATGGTTCAATTTTAC
CGGTAACGAAGACATGCTACGAACTGAAGACCTTTTACCGCTCATCGAAA
AACATTGCAAATATATTGAAGAAATTGGTATAAATTTCTATTATTCGCCT
TGTAAGGTGGAAAGACTTTTATTGAAAGTCAAGATGACGTCACTGAAAAG
ATTGAATCTTCTAGGATCCAAAATATACGATCTTAATAATCGGACAGAAG
ATACGAAACTCGGACATGGTGTTGTTTTGACGTGTGATAAAGAGTACAGT
CTACCTTCACCGAGGCTAGATACGTTTGATTCAGAGATAGTACAGAATTA
AATGCCAATAAACGAGCTACCCGATTCAATATTATTACAAATCTTTAAAA
AATGCGATTCCAAGACTGGATTATGGAAAGCAAGAAGCGTCTGCAAGCGT
TGGTATGTGATCCTTGCTGACAGTGAGCTCTGGCAGACCTGTGATTTATC
ACAATTCAACTTGAATGATGCGTGTATTTTACAGACCATCTTAAACTACA
TGCCCGTCAAACGTTTCAAATCCATCAAAATCAAACAAAACACGATTGAA
CGAAACATCCTTAAATCACTCTTAAAACACGCTCGAAGTCTCAATTCATT
AACATTACGTCATTGTCGGATAACAACACGTGATAATAGCTCGTCCAATC
ATATACGAGATATCCGATCACATGATGCCCAAGCAACCAATCAGATTTTA
GAAATACCGTGTGATTTGAAGCACATTGACTTGAGAAAGACAACAGGAGA
TACTGAGTTATTGGTAGATTTGATCACCAAATATGGCGCACAAATTAAAA
CTTTTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000114_pilon | genome | sc0000114_pilon:857747..861006 - |
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