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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000114_pilon:811624..816074- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13990.1.p1 ID=MSTRG.13990.1.p1|Name=MSTRG.13990.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4451bp|location=Sequence derived from alignment at sc0000114_pilon:811624..816074- (Clytia hemisphaerica_ch_hm2_pilon)
TTAGCCAATAGAAAGGCTTTAATTAATGTCAGTACGGTATGCTCTGAGAC
AAAGTGAAGAGGAAGTTGATACGTTGCTGATTGCTGATAATTTTTTTTTC
ATTCTGACGACGCATACTACCAATACTCAGTCAACTCAACCCCATTTACC
CCAACTTTGCTGAAGCTGGGAACACACATTGTATTTATTAAACCACGTTT
AAACTTTTTGGATTTACATTGAAATTAGAAGCTGATTAATATGGCAAGAA
TCCGTGTTTATAGCCCTTCTGGGCAGACTGTGAAGAACCAAAAACAAATG
CAACTTGACATGGAGAATGAACTTACTTTTGCCAACTCAGTTTATGAAAA
ATCATCTTTCCTTCTGGACCAAGAATCCAAGTATTGTCTTTGACCAGGGT
GAGTTAATTTTTCTAGAAAGTAAAATTTTGCGATAAAGGGGCTGGAAATT
GACTGCCGTGAGATCGGGTAACTTGCATCAGGTGGAGGCAAACGGTAACT
TGCATCAGGTGGAGGCAAACATGCATAGCCCTCAAATGAATGACAGTCTG
GGAAATCCTCTCAATTGCACGCTTATGTTCCGAGGGCGTAAGCGTGCAAT
TGCATGGTTATAATTTACACCCGCTCCCGCCCCGGTTGAAATTGCTTAGG
GATTTCAAAGGGGTTCAGAATTCTCTAATTCGGGCGAAGGCATGGTTTAA
CGGGCAATCCATTTTTACGGAATCTTCTTCTACGATAAATTTTGAGTAAA
ACTGCCTTAGGCTTTTTTTTAAAATTCAACAGAGCTTTCGGAAGGAATTG
CGTGTCAAAAATATAGGAAATTTTAAAGCGTGCAATTGCACGTTTACCGC
CAAAGCCGTCACCCGGCCGTCCCCCGACAATCTTGCTTAACGCTTACCCC
CTGTTTTAGAACAATTTCAATAAGCGTGTAATTACACGCTTAAAAATTCT
GCCATTTTGATAACCGTGCAATTGCGGGCTTACGGCCTCGGAACATAAGC
GTGCAATTGAGAGGATTTCCCAGACTGAATGACCTGTCTGGTCATTAAAA
TACAACTACGCAGCTCCGCTTGCAGCTCTACTCTACCATTTTTGTTTTGA
TTTAACTTTGTATTTTAATGACCAGCCAAGTCTTTCATTTGAGGACTATG
CATGTTAGCCTCCACTGATGCAAGTTACCCGATCTCTCGGTACGTACTTT
AGGCCTGTTTAGGCGTACAAACTTTCGCGAGCAGAAACTTTCGTGATTTT
TGCGAATTTTGGCCCTTTTTGTGAAAATAAATGTCTTTAAAAATCCTAGG
AAGGGCCATTCGTGAAAGTTTAGCTATGGTCGCGAAAATTCTTGACAAAA
TAGAAAATCTGTAAAACTTCAAACTTTGAATAAAATGTAACTTTTATGGC
ACTTTTTAGCTTGCTAAAAGACTAATAAGTCAAAGGACAAATGTTTCAAG
CCAATCCAAGAAGTATTTGCATAGCTGTCAACTTCGCCTCGCATAAATGC
GGGAGAGCTTCAAGTCGGAAAAATTTTCCGCGATAATCCAATTTTTCCGA
ATAGGAAAATCAGGAAATCGAGGGAATTTCCCCGCGAAGTCTGATTTTAT
CAGAAATTTCTTTCGGGAAATCGGGGAATTTTCATCTCAATTTTCCAAAT
TCATGAAACTTTGCCATGCCGCTTTCGAAATCTGAATTTTTTTTCAGGAA
GTCGGAAAATTTTTGGAAATGCGGGAGATACAGGAGAAAATCCTGAAAAT
GCGAGAGATTTGGCTGAATTTTTTTCCCGCTGGAGAAAAGGTTGGCATGC
GGGAGTCTCCCGTCCAATGCGGGAGAGTTGACAGCTATGTATTTGTCCCT
CTAAGCCATTTTTTCATGTGAAAATTCTCAATTTTACATTTTGATTCGCA
AAAGTTTATGCTCACGAAAAATATTTTTCCGTTAAATCCACAAAATCATA
CTTAATTCTTCTTCGTTCCCGACTAAACATTTTTTTCATATTTCGATTTA
AAAGCCTACTCGGTGCGAAAGAGAAATCGTGTATTTTTTAATACGCCGTT
CATTAAACTCAAATCAAATGACTTTGGAGGTTCGGTAAAATGGTGGCCGA
ATTGTCGTCCCATGTTTTGTCAGATAGTCCCAAGTTAGAGCAGTTTACGG
TAAATGTTGTAAATTTCGCGATTTTTTGTCCTCGCGAAAGTTTCTGCTTG
CGAAAGTTTGTACCCCCTAAAGTATATCGATGCCAGCTTGCAAGGAAAGA
ACCTCCTGGAAATTTTCAATGACCCCTGGAGGGGGTCATGAGAATTTTAG
TTGGAGAAAGGGAATCTTATGCAAAACGACGGTAGATTTTGAGATATATT
GGATTTTGAAAAAAGCCAAAATTCGGTTTTTCAATGCAGATTCTACAAAG
TAATATTTTCAGATTTTATGTATTTGAAGTTTGTGAACAAAGTTCTGATG
TTCTAAAGAGTTTGAATAAAGTTAAAGAAAAAATTGGAAATGCTATTTCA
CAATTTGAGAAATTTCATTTCCCTAACCCACGGAAATGACATTTCCCAAT
TCAGAAAGTAAAATTCACATTTGCAGAATAAAATTTGCTTGATTGTTTTT
ATGCTGCCTAAGCATGTTATTTTCCAATGAGTTTATACTTGAATCTCCTA
CTGGATATACAGATTCTAAAAGCTAAAAGGAGCTTTGTTAAATCGCAAAT
CCCAAACTTGTGTAATTTTGATTTCTCATTTCATTTCATAAGCTACAGAG
TAATGATCCCAAAGTTTGGATATTTTGTCACAAACTTGGGAATGGTATTT
TTCCAAACCTTGTTGTTTGCATTTTGCTTTTAAGTTCGTGAAATGCACTT
TCCCATTGCGGTTTTATTTTGTCTGAGGCATATATAATTTAACTTAAATT
TAAATCCCAAATGTGAAATGTAATATCTCAAACCTCTTAAATCTCAAAGT
CAAAATCACAAAGTTTGTTTGAAACTGAAATTAATTTTTTTTAATTTCCG
TATGAATAAATTGAAATTCCCAAGATTGGGAATCAATGTGTAAAATGTAA
AATGTTTATATTGTCTCAATATGTTCATTTTTTTCTCTCTAGGTGCTTCA
ACTGTCTGGGGACAGGATTCAATCAGAGAAGAGAAGGCATCATTTGACGA
ACAGTTCTATGCAAGTTCGACTTTATTCGATACAGAATTCGATTTCATTC
CATCTTCGTTAGATGATCCTTTTCTTTATAATTTGACCAATCCATTTAAA
GACTGTGAAATGATGTCTTCCCCAGATCGTACGAGAAAATGTTCCATTTC
TGATATTATTGATGTAATTAACGAAGAAAAATTATTAATTAAAAATTGTG
GTTCTCTGAACAACAAGGATGAAGGTTATGATTCAAATCTCTCCATTGGA
AGTCTCTCCTCTGAAGAAATTGGCCAAGATGAATTTGAGGGGAAATTCAC
TACTGAAGAAAATTCGAGTGATGATGAGTGCTTTATTAATGTTGAAGATG
AGTTACCAGTTATTCAAGATCAAACCACTAAAGCGGATCTACAACCACAA
TCCAAGGTTATTGGAAATCTAGTTTCATCAACTGGGTTACCGAAATTATT
ATCGGGTTCTAATAGTAGTGCTATTATTGTTTTATGGAACACTGAAAATA
AAATTCAAATTGTTTGTACTTCGAAGAAGAAGTTGCATGAGATTCTACAA
AATCAAAATGACTTGCCGTCTAGTTGCAATACAACTAATAATGCTCCTAC
CAATACAAAATCACTTGACCCTACTCCTACCAATATAAAGTCACTCGACC
TAGCATCTACTATAGAGTCTAAAGATTCAGGCTCAGAGACAGAAAAAGTC
GAGAATGATCAAGCTAAAAGAAGAGGTAGAAAACGAATTTACCATTCGAA
CACAGAAACAGAGCGTGAAGACTCGAAACGTGTACGTAACAATGAAGCTT
GTCGTAAATTTCGTAAAAGTCGTACCGAAAAACGTAAATCGTTATTCCAA
AGCGAATCAACTTTGCTACAACGTAACTTAAATTTGAAAGAACAGGTAGC
TGCCCTTGAAAGACAATTATTATATATCAAAGAAAAGTTGGGTATGTCTA
AAAACATATCTAACAATTAAAAGATTCCAAAGTTGAAAAGACTTCTTTTT
TGACGAAAAGGGATGGTTTTTTCCTCTTTCACACTTCCTAATTTTTTTTT
TTGAAATAAATAGTTTAAAGAAAAATTTATTGTTTTCCGATAAAAGATAT
ATTGACCGTGTAAGTAAGCACTTTATTTTAATGATGATTTTTGGAAAAGT
ATATTTTACAACGTAATAAATAACCTTATTAAAAGACAACGACAAGACGC
CGAGGGTAATATTTTTTGTAAGCCGAATTATTTGACTTATTCGACTTTTT
CATCGTTGTAATCATACTATGCTACTAATAAGGAAAAAGCTCTCATACAA
G Coding sequence (CDS) from alignment at sc0000114_pilon:811624..816074- >MSTRG.13990.1.p1 ID=MSTRG.13990.1.p1|Name=MSTRG.13990.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2220bp|location=Sequence derived from alignment at sc0000114_pilon:811624..816074- (Clytia hemisphaerica_ch_hm2_pilon)
GTGCTTCAACTGTCTGGGGACAGGATTCAATCAGAGAAGAGAAGGCATCA
TTTGACGAACAGTTCTATGCAAGTTCGACTTTATTCGATACAGAATTCGA
TTTCATTCCATCTTCGTTAGATGATCCTTTTCTTTATAATTTGACCAATC
CATTTAAAGACTGTGAAATGATGTCTTCCCCAGATCGTACGAGAAAATGT
TCCATTTCTGATATTATTGATGTAATTAACGAAGAAAAATTATTAATTAA
AAATTGTGGTTCTCTGAACAACAAGGATGAAGGTTATGATTCAAATCTCT
CCATTGGAAGTCTCTCCTCTGAAGAAATTGGCCAAGATGAATTTGAGGGG
AAATTCACTACTGAAGAAAATTCGAGTGATGATGAGTGCTTTATTAATGT
TGAAGATGAGTTACCAGTTATTCAAGATCAAACCACTAAAGCGGATCTAC
AACCACAATCCAAGGTTATTGGAAATCTAGTTTCATCAACTGGGTTACCG
AAATTATTATCGGGTTCTAATAGTAGTGCTATTATTGTTTTATGGAACAC
TGAAAATAAAATTCAAATTGTTTGTACTTCGAAGAAGAAGTTGCATGAGA
TTCTACAAAATCAAAATGACTTGCCGTCTAGTTGCAATACAACTAATAAT
GCTCCTACCAATACAAAATCACTTGACCCTACTCCTACCAATATAAAGTC
ACTCGACCTAGCATCTACTATAGAGTCTAAAGATTCAGGCTCAGAGACAG
AAAAAGTCGAGAATGATCAAGCTAAAAGAAGAGGTAGAAAACGAATTTAC
CATTCGAACACAGAAACAGAGCGTGAAGACTCGAAACGTGTACGTAACAA
TGAAGCTTGTCGTAAATTTCGTAAAAGTCGTACCGAAAAACGTAAATCGT
TATTCCAAAGCGAATCAACTTTGCTACAACGTAACTTAAATTTGAAAGAA
CAGGTAGCTGCCCTTGAAAGACAATTATTATATATCAAAGAAAAGTTGGG
TATGTCTAAAAACATATCTAACAATTAAATGAACTTACTTTTGCCAACTC
AGTTTATGAAAAATCATCTTTCCTTCTGGACCAAGAATCCAAGTATTGTC
TTTGACCAGGGTGCTTCAACTGTCTGGGGACAGGATTCAATCAGAGAAGA
GAAGGCATCATTTGACGAACAGTTCTATGCAAGTTCGACTTTATTCGATA
CAGAATTCGATTTCATTCCATCTTCGTTAGATGATCCTTTTCTTTATAAT
TTGACCAATCCATTTAAAGACTGTGAAATGATGTCTTCCCCAGATCGTAC
GAGAAAATGTTCCATTTCTGATATTATTGATGTAATTAACGAAGAAAAAT
TATTAATTAAAAATTGTGGTTCTCTGAACAACAAGGATGAAGGTTATGAT
TCAAATCTCTCCATTGGAAGTCTCTCCTCTGAAGAAATTGGCCAAGATGA
ATTTGAGGGGAAATTCACTACTGAAGAAAATTCGAGTGATGATGAGTGCT
TTATTAATGTTGAAGATGAGTTACCAGTTATTCAAGATCAAACCACTAAA
GCGGATCTACAACCACAATCCAAGGTTATTGGAAATCTAGTTTCATCAAC
TGGGTTACCGAAATTATTATCGGGTTCTAATAGTAGTGCTATTATTGTTT
TATGGAACACTGAAAATAAAATTCAAATTGTTTGTACTTCGAAGAAGAAG
TTGCATGAGATTCTACAAAATCAAAATGACTTGCCGTCTAGTTGCAATAC
AACTAATAATGCTCCTACCAATACAAAATCACTTGACCCTACTCCTACCA
ATATAAAGTCACTCGACCTAGCATCTACTATAGAGTCTAAAGATTCAGGC
TCAGAGACAGAAAAAGTCGAGAATGATCAAGCTAAAAGAAGAGGTAGAAA
ACGAATTTACCATTCGAACACAGAAACAGAGCGTGAAGACTCGAAACGTG
TACGTAACAATGAAGCTTGTCGTAAATTTCGTAAAAGTCGTACCGAAAAA
CGTAAATCGTTATTCCAAAGCGAATCAACTTTGCTACAACGTAACTTAAA
TTTGAAAGAACAGGTAGCTGCCCTTGAAAGACAATTATTATATATCAAAG
AAAAGTTGGGTATGTCTAAAAACATATCTAACAATTAAATGAACTTACTT
TTGCCAACTCAGTTTATGAAAAATCATCTTTCCTTCTGGACCAAGAATCC
AAGTATTGTCTTTGACCAGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000114_pilon | genome | sc0000114_pilon:811624..816074 - |
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