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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000114_pilon:757089..760231+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13984.2.p1 ID=MSTRG.13984.2.p1|Name=MSTRG.13984.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3143bp|location=Sequence derived from alignment at sc0000114_pilon:757089..760231+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTACATCCTGACGATCTGATTGGTTAATATTTGATGACGCCCGCCTACG
TCAACGATCTTGTTCgaccaaatttcttttcttctcaAGAAGTGACGTTA
GGGAATGTGACGCAGTTTTCATCATACAGCTAACACGCAAGAAGTCAAAA
CGTAACAAACCGAACAGTAAGAATTCATTATACTTGTATACTGTATTTGA
ACCTGAACGTAGagattttgtttgttattttttggaaagaaactTCTTTT
TGTAAACCTTTCAGCATTGGTTCTTAGTATTGAATTAAATTTGAGTGAGA
AAAAAGCGAAGACTAAGGAATTATTATGGTTATATTAGGTAtgctttttt
aaaatttttacttcaattAAACTTTCAAATATATTGTGAATTTATTGTCT
GATTGGTTTAATTATTTATTATATCAGGTATGGATGTTGCACAAAGTGGA
CATGTGTTCCAACCACCTATGGGACCACCTCCGAGCTCTCTTAGCGAAAA
GTCAGCTATTTTGCAGCAGCAGTCGGTCATTCAAACAAATCAACAATTAC
AGCAGCAACTTCAATCAATGCACGATAATGCTGAAAATAACAGGCAGAAA
AGTAGAGAGATACTGACTCGGAGGCCTTCCTACaggtatttcaaattttt
ttatacctGTTGCTTTATGTACCGTGAGATTGTACAAAATCGCGCATGTT
CACGTGCGCAATTTCGTAAAAATTTTGTCTTTATTACGTGAGTGATTCGT
CGCTCTCCACTCCTCCTtatttcttcctggaaaagcatgtaaaatacaaa
gttaaataaaaacaaaaatggtagagtagagctgcgagcagagctgcaca
gttgcattttttaatGATCAGCCCTAGGTCTTTTAttttagggctatgca
tgttagcttccactgatgtaagttacccaatctcacggtagtaaAGCTAG
ACAAATTTTTGGACCTGCAcatagttttttgtttgtttttatttttgcgc
GTAAAACTTATGCCAGTTATTAGGAACAGGCAGCTTGCTTGGAATTGGGT
TGAAGAATCCCTTGCAAATCATGAGCTTATTTTTCCCCTTTTTAACTGGT
TTAAGTGATGATTTGTTGGAGATCATGAAAGTATATTTCATTTTATGGTG
AATATCACCAggttttttaagatgaaaatctTCCTTTTTATCTAGGAAAA
TTCTTGATGACCTGGCAGCAGATTCTCCAGTCAAGATGGAAAACTATGAT
GATAATGGAAGTAGTAATTCTTCAAGTCCTGGTGGACCAGAAGAATTGAC
AGATAaacaacaacaagctcaacagcaacatcagcaccagcaacaacagc
aacaggctcagcaacaagcacaacaacaatatcaaagtattcaactcaaT
GGCGTAATTGCTCCCCCATCTTCAGTTGGTAGCACAGTGGTTCAGCTAAA
TGATGGCCAGGTACGTATAATTTAATGGATGAACATAATTCTGCTAGTGT
AATACCGGAAGTTGCTCTAATTCCACTCATCTTTAGATAAGAAGAAATAG
AGATATGCATCTtactaaatttcaaattttacttttcaggCTTACACGAT
AAAAGGTTCTCTTCCTGTTGGATTGGAAAGTGCAACGCTAGCGTCTCCTC
AACAAATGGCAGAAGAAGCAACTAGGAAAAGAGAACTAAGGTTATACAAA
AATAGGTAAATATTGCTTGATTTTTAcaattattttcaccattttatcaA
GAACAGTTTCTGAATCTGAAACTGAATTTCTTTAACAAATTAGGAAAGTT
AGCAGAAAACACCAGAGACCAAATTAAGGCATCGCATTTTGCAATTTGTG
AtgccttttttggattttttacaagctaaaaatttaTCCATTTCAGGATG
AAAAAACTATGCTTGCTAAATTCAATGCATGAAATACTGCTACTTTCTAA
GTTAACCAAACAGCTGAttgatcttgaatttaaaagctCCAAATCAGCAT
TTTAGTCAGTATAACATTAACtaaatttatgattttgttcatttttaggG
AAGCAGCCAGAGAATGCAGGcggaagaaaaaagaatatgtaaAATGTCTA
GAAAATAGAGTTGCAGTACTAGAAAACCAAAATAAAGCTCTAATAGAAGA
ACTAAAATCTCTAAAGGACTTATACTGTAGTAAAGGAGATTAAGTTGGTG
GTTTGTGTCATAATATAGAGCTGATGTTTGTAAATAGACGTATGTTTTAG
AGTTTTTATGGtttaaatatcttttttctTAACTGATgactaaaaacaac
aaaatgatatttttattagCACTTTAGAAGGATATTATTTTTcatatgaa
tttaaaaaaagtgaaatcttATTTGTTAAGTGTACAAAAATTTGGAGTGG
AGTGGGTCAGCCTTACTTTCTTTGCATGAATCAATTGCACACTAATTTAC
AATCAACGTAATTCCTTATCCTGGACAAGGAAATGAGTGATTTAGCtgaa
ttatattttcattttaattacTTTCTTATCTGTTTAGCTCAACAGTTTGT
TATCATCAGAGCAAACCTTTTAAGATGACATCAAATATTATTtcggtcaa
tttttcatttattttcaaaacccATGTTGCAATTTTCCTGATGTCATATT
GACTGTTTGTTTTATGATTAAATCTGTTTACAAATTTGTTCCCTAAACAA
GATGATGTTTTCATCTAAATGGATTTctaaacgtcaattgacgtcaAGTA
TCGTTAAAGTGGCTTAAGACCCTTCACTTAGATTTTGTGCACGGTTAATA
ATAATGtattatttttcagtttatatatattttttatcgtctcaatttat
ccacttttcgtgcttttctttctttttttttgttatggGAATTTTGGAAT
TGTTTGTTAAGTCCTACCCGGTTCcatgttttatttgtttcaatattCTG
GTGTTTTTGCTTTGGTATGcattagtttttttatatatttgtttGTCTGT
TTTTGAGCCTGTATTAATACTGTAAATATTTTACATTATCTCGATAATAT
TAATAACGAGTCCTTTCCGTGACAAACTTATTATTGTACATACAATATAC
CTGTATCCTTACaaccaaaatacaaaattattaCCAAATTAAA Coding sequence (CDS) from alignment at sc0000114_pilon:757089..760231+ >MSTRG.13984.2.p1 ID=MSTRG.13984.2.p1|Name=MSTRG.13984.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3735bp|location=Sequence derived from alignment at sc0000114_pilon:757089..760231+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTATATTAGGTATGGATGTTGCACAAAGTGGACATGTGTTCCAACC
ACCTATGGGACCACCTCCGAGCTCTCTTAGCGAAAAGTCAGCTATTTTGC
AGCAGCAGTCGGTCATTCAAACAAATCAACAATTACAGCAGCAACTTCAA
TCAATGCACGATAATGCTGAAAATAACAGGCAGAAAAGTAGAGAGATACT
GACTCGGAGGCCTTCCTACagGAAAATTCTTGATGACCTGGCAGCAGATT
CTCCAGTCAAGATGGAAAACTATGATGATAATGGAAGTAGTAATTCTTCA
AGTCCTGGTGGACCAGAAGAATTGACAGATAaacaacaacaagctcaaca
gcaacatcagcaccagcaacaacagcaacaggctcagcaacaagcacaac
aacaatatcaaagtattcaactcaaTGGCGTAATTGCTCCCCCATCTTCA
GTTGGTAGCACAGTGGTTCAGCTAAATGATGGCCAGgCTTACACGATAAA
AGGTTCTCTTCCTGTTGGATTGGAAAGTGCAACGCTAGCGTCTCCTCAAC
AAATGGCAGAAGAAGCAACTAGGAAAAGAGAACTAAGGTTATACAAAAAT
AGgGAAGCAGCCAGAGAATGCAGGcggaagaaaaaagaatatgtaaAATG
TCTAGAAAATAGAGTTGCAGTACTAGAAAACCAAAATAAAGCTCTAATAG
AAGAACTAAAATCTCTAAAGGACTTATACTGTAGTAAAGGAGATTAAATG
GTTATATTAGGTATGGATGTTGCACAAAGTGGACATGTGTTCCAACCACC
TATGGGACCACCTCCGAGCTCTCTTAGCGAAAAGTCAGCTATTTTGCAGC
AGCAGTCGGTCATTCAAACAAATCAACAATTACAGCAGCAACTTCAATCA
ATGCACGATAATGCTGAAAATAACAGGCAGAAAAGTAGAGAGATACTGAC
TCGGAGGCCTTCCTACagGAAAATTCTTGATGACCTGGCAGCAGATTCTC
CAGTCAAGATGGAAAACTATGATGATAATGGAAGTAGTAATTCTTCAAGT
CCTGGTGGACCAGAAGAATTGACAGATAaacaacaacaagctcaacagca
acatcagcaccagcaacaacagcaacaggctcagcaacaagcacaacaac
aatatcaaagtattcaactcaaTGGCGTAATTGCTCCCCCATCTTCAGTT
GGTAGCACAGTGGTTCAGCTAAATGATGGCCAGgCTTACACGATAAAAGG
TTCTCTTCCTGTTGGATTGGAAAGTGCAACGCTAGCGTCTCCTCAACAAA
TGGCAGAAGAAGCAACTAGGAAAAGAGAACTAAGGTTATACAAAAATAGg
GAAGCAGCCAGAGAATGCAGGcggaagaaaaaagaatatgtaaAATGTCT
AGAAAATAGAGTTGCAGTACTAGAAAACCAAAATAAAGCTCTAATAGAAG
AACTAAAATCTCTAAAGGACTTATACTGTAGTAAAGGAGATTAAATGGTT
ATATTAGGTATGGATGTTGCACAAAGTGGACATGTGTTCCAACCACCTAT
GGGACCACCTCCGAGCTCTCTTAGCGAAAAGTCAGCTATTTTGCAGCAGC
AGTCGGTCATTCAAACAAATCAACAATTACAGCAGCAACTTCAATCAATG
CACGATAATGCTGAAAATAACAGGCAGAAAAGTAGAGAGATACTGACTCG
GAGGCCTTCCTACagGAAAATTCTTGATGACCTGGCAGCAGATTCTCCAG
TCAAGATGGAAAACTATGATGATAATGGAAGTAGTAATTCTTCAAGTCCT
GGTGGACCAGAAGAATTGACAGATAaacaacaacaagctcaacagcaaca
tcagcaccagcaacaacagcaacaggctcagcaacaagcacaacaacaat
atcaaagtattcaactcaaTGGCGTAATTGCTCCCCCATCTTCAGTTGGT
AGCACAGTGGTTCAGCTAAATGATGGCCAGgCTTACACGATAAAAGGTTC
TCTTCCTGTTGGATTGGAAAGTGCAACGCTAGCGTCTCCTCAACAAATGG
CAGAAGAAGCAACTAGGAAAAGAGAACTAAGGTTATACAAAAATAGgGAA
GCAGCCAGAGAATGCAGGcggaagaaaaaagaatatgtaaAATGTCTAGA
AAATAGAGTTGCAGTACTAGAAAACCAAAATAAAGCTCTAATAGAAGAAC
TAAAATCTCTAAAGGACTTATACTGTAGTAAAGGAGATTAAATGGTTATA
TTAGGTATGGATGTTGCACAAAGTGGACATGTGTTCCAACCACCTATGGG
ACCACCTCCGAGCTCTCTTAGCGAAAAGTCAGCTATTTTGCAGCAGCAGT
CGGTCATTCAAACAAATCAACAATTACAGCAGCAACTTCAATCAATGCAC
GATAATGCTGAAAATAACAGGCAGAAAAGTAGAGAGATACTGACTCGGAG
GCCTTCCTACagGAAAATTCTTGATGACCTGGCAGCAGATTCTCCAGTCA
AGATGGAAAACTATGATGATAATGGAAGTAGTAATTCTTCAAGTCCTGGT
GGACCAGAAGAATTGACAGATAaacaacaacaagctcaacagcaacatca
gcaccagcaacaacagcaacaggctcagcaacaagcacaacaacaatatc
aaagtattcaactcaaTGGCGTAATTGCTCCCCCATCTTCAGTTGGTAGC
ACAGTGGTTCAGCTAAATGATGGCCAGgCTTACACGATAAAAGGTTCTCT
TCCTGTTGGATTGGAAAGTGCAACGCTAGCGTCTCCTCAACAAATGGCAG
AAGAAGCAACTAGGAAAAGAGAACTAAGGTTATACAAAAATAGgGAAGCA
GCCAGAGAATGCAGGcggaagaaaaaagaatatgtaaAATGTCTAGAAAA
TAGAGTTGCAGTACTAGAAAACCAAAATAAAGCTCTAATAGAAGAACTAA
AATCTCTAAAGGACTTATACTGTAGTAAAGGAGATTAAATGGTTATATTA
GGTATGGATGTTGCACAAAGTGGACATGTGTTCCAACCACCTATGGGACC
ACCTCCGAGCTCTCTTAGCGAAAAGTCAGCTATTTTGCAGCAGCAGTCGG
TCATTCAAACAAATCAACAATTACAGCAGCAACTTCAATCAATGCACGAT
AATGCTGAAAATAACAGGCAGAAAAGTAGAGAGATACTGACTCGGAGGCC
TTCCTACagGAAAATTCTTGATGACCTGGCAGCAGATTCTCCAGTCAAGA
TGGAAAACTATGATGATAATGGAAGTAGTAATTCTTCAAGTCCTGGTGGA
CCAGAAGAATTGACAGATAaacaacaacaagctcaacagcaacatcagca
ccagcaacaacagcaacaggctcagcaacaagcacaacaacaatatcaaa
gtattcaactcaaTGGCGTAATTGCTCCCCCATCTTCAGTTGGTAGCACA
GTGGTTCAGCTAAATGATGGCCAGgCTTACACGATAAAAGGTTCTCTTCC
TGTTGGATTGGAAAGTGCAACGCTAGCGTCTCCTCAACAAATGGCAGAAG
AAGCAACTAGGAAAAGAGAACTAAGGTTATACAAAAATAGgGAAGCAGCC
AGAGAATGCAGGcggaagaaaaaagaatatgtaaAATGTCTAGAAAATAG
AGTTGCAGTACTAGAAAACCAAAATAAAGCTCTAATAGAAGAACTAAAAT
CTCTAAAGGACTTATACTGTAGTAAAGGAGATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000114_pilon | genome | sc0000114_pilon:757089..760231 + |
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