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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000114_pilon:716030..720942+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13979.10.p1 ID=MSTRG.13979.10.p1|Name=MSTRG.13979.10.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4913bp|location=Sequence derived from alignment at sc0000114_pilon:716030..720942+ (Clytia hemisphaerica_ch_hm2_pilon)
aaactaaaacgaggctaaacaaaaagagaatacAGTCTGTTttggaaatt
taaaatttctggaATAGACATTTGACATTTGAGTCTCTTTTACATGCAAC
ATTTGTGATTTCCAAAATGTTATTTTGTCGTGAAAACGAGACTGAAAATA
TGGAAACTAGTTTTAGCATGCTGGTAAGCCAATTCAATTCTATCTATCAA
GGCTCTACGAAAAATTCTCAGTTCCTTGGTTTGACAAGAATCATAATTTA
TATTATGAGATGATGTTTCTTAGCTTGTTAGTTACGTTATTTCTTAACTG
TCTACTGCTGTACTATATGATAGAAGAGGTCAGTTCCTTAGATTTACCAG
AAATTACGTGAGATTATGACATTCAAAAACAGGGAAGTTGTTTTTCTAAA
GCTTTAAAATAGATGTGGAGTACTATGTATTGAGATTGCTCATAAAAGGG
AGTTCCAGACTTTTATTCTcataaattaatttcaaaataaatggtGGTGG
TTGACACTGtaagttttttcaaacattttccacatcCGATATGGAGTAAA
ATGAACTAATAAATTTCCTGCAGACTTTATCACTGTATGGTCACAAAATA
ATAGAGACGTAATGCGTCAACCCTCTATTGATAGAAATTTCCATTTTATT
ATAAAGACTAGAGAGAAAAAATTTGTCATCGCATCACGCTTACACAAAGA
TGTAATCAACTCAAAATTCATTTCACTGTTAAACTTTGTGGCAAACttta
ttgataaaatttatGTTTGAGATAGACCTCGTATTTATTACTCATGGTAT
GGGATTGACTTTTCAATTTTAAGTTTATTGATTTGGTTGACAAGACAGAG
ATCAACATAGAAAGTTTGGAATTGAACTAGGCTAGGGCTACTTCCAAAGG
CCCTGTTTAAAAGGTGGGTGTGCATAAATTACAGTAACAAGCAattgtga
aattaaaaataaaagtaacatGAGTATAATGACTTTACCAGCAGAATGCT
ATTTGttatgaaatttcaaatataaaaCTAGCGTTAATGTATTTAACAGC
GCAGTACGAATGCAGCAAtcgaaaatagtttttttcagACATTTTGTATA
GAAATAACTTTTATTCGTATAGTTCGTTCACCAAGTCATGTCATGCAGTT
TCAGTGACGTTCGGATggacaaataaaattttttatttggttaatATTTT
GTATGGATCTAGGTCAGAATTGCGAGGTAATATTTTGGAATGTATTTTAC
TTACATGGAGTTTTAACGAGGATTGGGATCTAGTTTACAGCACCGAGCAC
GAAGAAGATGTCATTGCGCATTCGACACTATTGAACTTCTGGGGCGTTAG
GATTAATGAGTGTTTTCAAACATAAGGCTTGTATTTTCAGTTGGaattca
aaaaaggaaaattcaaaacataaaacttGAGAGAATTATAGCTTTTGCAA
TATAACAATAGCCGACATCCTGGCGTGTTGACAAATTAGGATTTTTGCAG
CAGTACAGCTTTTCATGTTACTAACAAATACAATAGTGATTAGCATCAGA
GCTAGGATCTGATTAAGAGGGATCATATAAGTTCCTAATGTgtacataaa
aaaaattgtatgcGCGTGTAGaaaatgctaccaaaaataccttgaaaatc
taaaagaaagtaaaacctgtaaagaccaaagTTCATTTTAATGCAAAAGT
CATTAATAGCTTTGTTTGAATACTTCTGCTTGTAAAGATTCGGtttaaaa
aagtcttttttagTGTAGAAATTCTTAGTACAGTAGTCGGAGACAGTAGC
TAATTGAGTGTATTATCGTGTCTTTCAGTAATCAGGTACAgtttatcatt
aaaaaaacttaaatcaTGAGAATATTGTTTATTTGATGTTACTGATGAGT
TCAAAATCTCTACTTCTGCAACAGTTACAGACGGACAATAActctacatt
ttttaaataggtGAAACAACAATCTCTCTCTCAAAATTTTAGTACAAGGT
GATGAAATACATGTTACAAGACAGTTGATATAGAAATAACTCAATTATCA
CTTTTTCCCTAAAGGGAGTGGTAATACAAAACGGAGATCGGCGTTTTGAT
ATAAATAATGGGGCACAAAGCGTTCTCGATCAAGGTGTTGAACAAAGTGT
CAGATTTAATATCAATTTGTCAACCGTTTCACCAAACAAAACTTGACTCT
AAAcatatatacaaaaaaattgtttgaaagttGTTAACAACAAAAAACTG
TCAAATAATATGGAAGACATTAAGACTTCTAAAAACTTTTGTGGTTTTTT
AAAGAGATCAATTCGCTGTGAATGAAAAGATAAAGGATGACACACTAtga
atgaatttcaaaaaaaatacatttgagTGAATTTGGagagattttcgaat
aaaaaactAATCTTGAAGAAAAGGAATAAATCTCCAGTGTCCGGCAAAGT
TCTGAAAACAGTACTGGAGCTTTCAAAGCAACAAGGCATCTTAGACTTTT
AAAGAAGACCATTCTACTCGTGTTTGCTAGAGTTTTGACTTGTTTAAGCG
GTTGCTAAAAAGTCACTAAAGACAAGTATAGACTTAGAGAAACAAAAACT
TAAAGGCTatgtttgtttctttttttagcCTGCAGTATCGCCACCACCGG
AGAAGAAAGGAATCAAGATGATCCGGACTTGTCAATTGTTCTTGGTTCTC
GTCCATAGAACATTCTTATTTGCAGCTGTTCTCATTGGAGGAACCTACGC
CATCAGAGCTATCGAGAACCACTATCGAGAATCGATTTCTCATATGGAGC
TGAAAGATGCAGCTGAATATTGCTATACCATTCTAACGACCATAGGTAAG
tcttaatttaaaatttgaatgttaAAGAATGTTAATCATGACAGTAGAGC
CATCGCTTTAATCAAGTTGGAGAATAAAAGAAGTTACTGAAACAACATAA
GAGTTTTGTAAGGAAAACAGTATTCACTACaaaaaaaCTTATTAAAATTT
GACCATTTCATATCAACACCAAGGGAACTCACAACTTGACATCACTTCAC
TTGCTAAACTTGAGCTTCCAATGCCGTGATAgcaattgaaaattgatccc
tCTAGTATAGAAATTCTTGGCTACCAATtatctcaaaggtaacgaatcaa
ATTTACACAACTACTTAGTAATCATCTTTTGCTCGTTCAATTATTTCAGG
TTACGGCCGTGAGAAAACCCTCCCTACATCAGACTGGGGCAAAGTGTTCA
CCATTGTCTACGCAATCATTGGTATACCAGTCGCCATTTTCACTGTCGGA
GCATACGGAGCATTCCTGAAGCATTGTGTGTTGAAGTTAATCATTGGTTT
AGAGCACTGTTGTTGCTCATGCTGGCAAGGCAAGAAAATGAATCTCAAAG
TGCTTATTATATTGATTCTCCTTTTCATTGcagagttcttttgttttgga
gtCTACGTTTGCTGGTTGGAAGACAACAACCAATGGAattatttagattc
tgtttacAGTTGGTTTCTCACCATGACAACCATTGGATTTAAACAACACA
ACCCGTACCCAGACCACTTGGATCTGTTACACGCCTTGGCCTACCTGGTT
ACCAGTCTATTCAGCATCATAACTCTGGCCGCCATCTTTCAAACCGTTCA
ACAAATGATTGACGCTGTCCACAACCAAGATCGCAGCATCTGCGCCATGT
TGTTTTGTTGTTATAGCAACAATAAGAAAGATGCATACCCAATGGATAAA
TACAATTCGAATCATAGTATGCGATATGCAGAATATCCTCATGAATAAAC
AGACCATTAAAGCACTTATGTTGAGAAAATATTAACCAAAATATTTATGG
ATGGTTGGCTGGAGATTTCTGGAAGtgaataattctaaaaatgggatttt
aagactttcagacttttaagagtaaaaaaacaattattcaAAATGGACAA
AAGAGCTGAATCGAGAGTCaagatttttcatgaaattattcaacatgaat
TAAGCTGATGAATAATGATTAATAACTGTAACTgcaaacaaatattttca
taacATATGGTCTTGGTTTGCAATTTGAGTTTGAATTCAAAAGTTCACAC
CTGAAAGTTGCATTCAAGAAGCTaaactttcaattaaaaagcTATAATAG
AGTATGGTTTTAGATATGAAAACGTATCAATTTCCTAGATTAATAAATAT
AACAAAAGTTAGATAGTCGTTAATTGTAAAGAGTAATCTTAAAAACTTCC
ATCATTTTTTGAAGCGTTTTGAAAACTTGAAGACCTTAGtttttttGATC
AATAATGCAATATGAAACGAAGCCAAATTTGATCAAATCTGGTATATCTT
gaagttgtgatttttttgcattggtatttaaatttaaaagatcCCTTGCA
TTAATCAGTGACTTCAAGCTGGGTACAGTTGAATGAACCATaaaaaaaCT
TGCCTTTTACTGGACTTTTAAGCCAAAAAGGCACAAAAAGAGTAATTTTG
CAGCAAAAGTAGAACTTATTTTGAAATGACAATAAATATCATaacaattt
agattttttttatcaaaagatgtattatattataaaagaagaagttatta
taaaattttagaataaccaTTTTTAAGCAGTTAAAACTGCCTTGAAATAG
TTGTGTAGCCTCTTGGTATAACACTTGctgtacaaaaatttttgttttgc
tttgtcgtttttgctttttttaagaatagaaattttagtttcttttttct
cattttatttgtttttttattgataatgtgAATATATAACAAATTTAAAC
AAGGAAAACATGGAAGGTTATTCATATTTAATGACATAAAGGGATAAACC
AGCCACACTAAAATTTAGTCAAATTCTTAGGACAAAAACACATTCATTTA
AATCCAAAAAGCT Coding sequence (CDS) from alignment at sc0000114_pilon:716030..720942+ >MSTRG.13979.10.p1 ID=MSTRG.13979.10.p1|Name=MSTRG.13979.10.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2619bp|location=Sequence derived from alignment at sc0000114_pilon:716030..720942+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTATTTTGTCGTGAAAACGAGACTGAAAATATGGAAACTAGTTTTAG
CATGCTGcCTGCAGTATCGCCACCACCGGAGAAGAAAGGAATCAAGATGA
TCCGGACTTGTCAATTGTTCTTGGTTCTCGTCCATAGAACATTCTTATTT
GCAGCTGTTCTCATTGGAGGAACCTACGCCATCAGAGCTATCGAGAACCA
CTATCGAGAATCGATTTCTCATATGGAGCTGAAAGATGCAGCTGAATATT
GCTATACCATTCTAACGACCATAGGTTACGGCCGTGAGAAAACCCTCCCT
ACATCAGACTGGGGCAAAGTGTTCACCATTGTCTACGCAATCATTGGTAT
ACCAGTCGCCATTTTCACTGTCGGAGCATACGGAGCATTCCTGAAGCATT
GTGTGTTGAAGTTAATCATTGGTTTAGAGCACTGTTGTTGCTCATGCTGG
CAAGGCAAGAAAATGAATCTCAAAGTGCTTATTATATTGATTCTCCTTTT
CATTGcagagttcttttgttttggagtCTACGTTTGCTGGTTGGAAGACA
ACAACCAATGGAattatttagattctgtttacAGTTGGTTTCTCACCATG
ACAACCATTGGATTTAAACAACACAACCCGTACCCAGACCACTTGGATCT
GTTACACGCCTTGGCCTACCTGGTTACCAGTCTATTCAGCATCATAACTC
TGGCCGCCATCTTTCAAACCGTTCAACAAATGATTGACGCTGTCCACAAC
CAAGATCGCAGCATCTGCGCCATGTTGTTTTGTTGTTATAGCAACAATAA
GAAAGATGCATACCCAATGGATAAATACAATTCGAATCATAGTATGCGAT
ATGCAGAATATCCTCATGAATAAATGTTATTTTGTCGTGAAAACGAGACT
GAAAATATGGAAACTAGTTTTAGCATGCTGcCTGCAGTATCGCCACCACC
GGAGAAGAAAGGAATCAAGATGATCCGGACTTGTCAATTGTTCTTGGTTC
TCGTCCATAGAACATTCTTATTTGCAGCTGTTCTCATTGGAGGAACCTAC
GCCATCAGAGCTATCGAGAACCACTATCGAGAATCGATTTCTCATATGGA
GCTGAAAGATGCAGCTGAATATTGCTATACCATTCTAACGACCATAGGTT
ACGGCCGTGAGAAAACCCTCCCTACATCAGACTGGGGCAAAGTGTTCACC
ATTGTCTACGCAATCATTGGTATACCAGTCGCCATTTTCACTGTCGGAGC
ATACGGAGCATTCCTGAAGCATTGTGTGTTGAAGTTAATCATTGGTTTAG
AGCACTGTTGTTGCTCATGCTGGCAAGGCAAGAAAATGAATCTCAAAGTG
CTTATTATATTGATTCTCCTTTTCATTGcagagttcttttgttttggagt
CTACGTTTGCTGGTTGGAAGACAACAACCAATGGAattatttagattctg
tttacAGTTGGTTTCTCACCATGACAACCATTGGATTTAAACAACACAAC
CCGTACCCAGACCACTTGGATCTGTTACACGCCTTGGCCTACCTGGTTAC
CAGTCTATTCAGCATCATAACTCTGGCCGCCATCTTTCAAACCGTTCAAC
AAATGATTGACGCTGTCCACAACCAAGATCGCAGCATCTGCGCCATGTTG
TTTTGTTGTTATAGCAACAATAAGAAAGATGCATACCCAATGGATAAATA
CAATTCGAATCATAGTATGCGATATGCAGAATATCCTCATGAATAAATGT
TATTTTGTCGTGAAAACGAGACTGAAAATATGGAAACTAGTTTTAGCATG
CTGcCTGCAGTATCGCCACCACCGGAGAAGAAAGGAATCAAGATGATCCG
GACTTGTCAATTGTTCTTGGTTCTCGTCCATAGAACATTCTTATTTGCAG
CTGTTCTCATTGGAGGAACCTACGCCATCAGAGCTATCGAGAACCACTAT
CGAGAATCGATTTCTCATATGGAGCTGAAAGATGCAGCTGAATATTGCTA
TACCATTCTAACGACCATAGGTTACGGCCGTGAGAAAACCCTCCCTACAT
CAGACTGGGGCAAAGTGTTCACCATTGTCTACGCAATCATTGGTATACCA
GTCGCCATTTTCACTGTCGGAGCATACGGAGCATTCCTGAAGCATTGTGT
GTTGAAGTTAATCATTGGTTTAGAGCACTGTTGTTGCTCATGCTGGCAAG
GCAAGAAAATGAATCTCAAAGTGCTTATTATATTGATTCTCCTTTTCATT
GcagagttcttttgttttggagtCTACGTTTGCTGGTTGGAAGACAACAA
CCAATGGAattatttagattctgtttacAGTTGGTTTCTCACCATGACAA
CCATTGGATTTAAACAACACAACCCGTACCCAGACCACTTGGATCTGTTA
CACGCCTTGGCCTACCTGGTTACCAGTCTATTCAGCATCATAACTCTGGC
CGCCATCTTTCAAACCGTTCAACAAATGATTGACGCTGTCCACAACCAAG
ATCGCAGCATCTGCGCCATGTTGTTTTGTTGTTATAGCAACAATAAGAAA
GATGCATACCCAATGGATAAATACAATTCGAATCATAGTATGCGATATGC
AGAATATCCTCATGAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000114_pilon | genome | sc0000114_pilon:716030..720942 + |
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