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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000114_pilon:682003..689392- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13978.3.p1 ID=MSTRG.13978.3.p1|Name=MSTRG.13978.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7390bp|location=Sequence derived from alignment at sc0000114_pilon:682003..689392- (Clytia hemisphaerica_ch_hm2_pilon)
CTTGAACGCACAAACATTCCAATCAAAAAGTGGGAGATGGCGGATGAAGA
AGCGGGAAAGGTGAGTAATCGACAGTTTTATTAAATTCAAATTTGATTTT
AAATTTAAATTTGTCTTTCTGAATTTTCCGAAGCATCATTATTGCATTTA
CATGTTCCAGTTAGTGGAGCCTATTCCCTCAAATCTATTTTGCTACTACC
TTGCAGTGGAATTTGAAGCCGAGTGGTTGCAATAATAGACCTTTTTTCAA
AGAGGACGTTCTGTTGAATAATTATGTAGTCCAGCCATGAAAACAATGAT
AGAGCCATGCATAATTAATGTATCATGCATATTGTAATAATTATGCATGG
TTTTATCATTGTTTTTTTGCTGGACTACATAATTATTCAATAGGGTGGCC
TCCTCTTTGAAAAAAGGTTCTTGGCTTGGAAAGTCTCCTTGCATCCCACG
TTTATCATTTTTCATTTCATTGCTATCTGATTTATTCAGGATTTATTCTA
TGCAATATTCCACTTTTGGTACATAGCTTGTACCGCAGTCGTACTTTGCA
AATTATGGGAAATTTTTTACTCAACGAATACCCCTCCCTGTCTCACGTTG
TTTTGACTACTTTTTATGCTAATTAACCGCTTGTGGTTAACATAGACATA
GACCCTGATTTGGAGCAATGTCCGTTTCCCCCAAACAAGAAATATAGATG
AGTTATAGTAGAGCTTATAGGTCTTTATATCCCTAAAATTATTTTTTATG
TTTTGAATTGAATAGGAATTGTAGGAAGTAATCAAATCATTTCACATATT
CTTTTTGGCTCACAACAACAATCAAACAGCAGGTTTTAAAAGACTTTAAA
AATGCTTCATTTTTTGTTAAAAAATAACAATTATTATTAGGCGGCAATCA
AAAATATGTTCCATTCGGGTCCTAAAAGATCTTCAAATCCAGTCGGTCGG
TCAATTTCTAGTATAATTTCTAGCATTTCTAACTTTTAGTGATTTATTTA
CATATATTTTTATTTATTTAATTTATCTTACCTTTTTATTTTGCATGAAG
CTAATGAAACTTCCTATTTTGTTGCAAGTTTAGGTTAGCCTCTACCCATG
TGTTTTTACTCTCACTAATTTTAAATTCTTTGCCTTTGTTCACCTTACTC
TTTCTTACATATCACTTATTTTGAAGCCTTTCTCTCTGAAACCATGAAAA
TATTTTAAATGTTTATAGCTATTTATCTAACTTATTTAAACTCATTTAGT
ATTTATTTTTTTGACTTGAACTTCTCATCACCGCCAATTTACATTTTCAG
CTTGAGGATTCAACTTAATTTCAACTCCTAGTTTTCAATACTGCCCTGCC
TTCACATTTTGGTATTCTCAGCACCAAGCCATTATGTTAAGCTTTGTGTC
AATATTCTCAGCCTTTAATTCTCAACTTTACTACTTATCCTTGGTTTGAT
ATGAGCTTTTTCTTTAGGAATTTTATATTATAAATTATCTTTGAATAAAG
AACCAAACATTTTATTTTTACTCATTTTCATTTATATTTTTTTGTTAAAT
GTTTTTATATGTAGGGAGAACGAACATGTATGTTTTGTTACTACTTAAAT
ATATAGATAGATAGATAGATCAGTCGGTAGTAAATTTTGTCAGATTTTTA
AGATCTAGTAAATCCTGATGAATCCAGTCGGCAATCAACAGAATCTTATG
CCGCCATCCATCTTTAATTTGTCGCGCGCATGTGTTAACCTTAAAGCAGC
CCTTATTTTCGGCCCCAGGGTATTGGCTCTACCGTGTTGCTGAATTTTGA
CATGAAAATTTCAATAAGGGTACATGAAAAAACTTGAACATGACTCAATG
TGGTTTAAGTAAACAAAAAATAATAATTCAAAGACATGCTCCGTTCGCCC
GTGCCTGCCATTATGGGAAAGATCTCAACCTGCGAACAGCGCCAAAAAAA
ACCGAAGATTTTTAATGACTTTCCGAATCGGGTTTTCTTGTAAATAAACA
GTCGGTCGGATGACCCGAACGCAACATATTTTTGATTGCCGCCTTAGTTC
AACTTAACAGCAGTGACAACTGTTACTGATGCTTAATACCCTGCCGCTCA
ATTCTTAGCAATCGATCCACAAAAATTAAAGCTATAAGGCCCTATAAGAT
CAGTTACAGTAAGACATGAAAGTCACTTTGAATTTCACAAAATTTCAGAT
CAAAACTCAAAACTTAACTGGGTCGCTTCAGCCAATTTCAGCTCTGGAAA
CTGAGCTTCTCTCAATAAAAACTGTGAAAGAGATAAGCTAGGAAAAATGA
ATTCAGTGTTGTTTTTTATAAACTCGACAGAGAAGCTGTACATAGCCTCA
TAGCTATTACCGTCAACTGCTCCAACTTGGGACTATCTGACAAAACATGG
GACGGCCATTTTACCACCATTTCAGTGAACCTCCAAAGTCATTTGATTTG
AGTTAAGGAACTGCGTATTAAAAAATACACCATTTCTCTTTCGATTTTAC
AGTATGTGAAAAATACAAACCAGATATGCAACAGTCCCATGTTTCGACCA
ATTGTCTAAAGTTAGAGCAGTTGACGGTACCCAAATTTTTTCAGAAATTT
TGCTAGGTCGTTTCAAGAATTTCTAGCTATGTCTCTTGGCTTCATTATCT
CTAAATGAAAGGCGGCCAGAAATATAAGCAGTCATTGAAGATCATTACGC
ACAAATTTTTAGAGAAGTTGAGCTCAGTAATAATATAATCCAGATTTGCT
AGGGCAGAAGAAGTCAAAAAGGGTGTTTCCAAGTCACTCAGCCAGGGTGA
TATGGGTCGGGCGGTATTAGATAATTAAATTTTTGATGGCAGGACACAGT
GTCCAGCAAAACCTTAAAAACTCCTATCAGGATTAGAAACTAGGCTAGTC
TTACCTCTTTTATCTTTCCCACAACAATACAATGATGCAAGTTACCAGAT
CTCATGGTAGTGAGGATACCACTAAATTCGAATTTCCTACTGCAAGTTTT
TGAGAGAGAAATCTGCCTCACAGCCTGAACCCCTCCATACCTTGTATACA
TTAGTATACAAAACTTTTCAAGAAAACCCAGAACAGCCGAAGACATCCAA
AAATAGACCTTTTCAGGACCCTCCTGGCGCTCCGGAAACGTCCAGAGCCA
AAAGTGCCGTTTTTTGTTCTTCGGAACACAATTTCCAGCGATTGGTCGGC
ACCAGCAGAACTCCAGAATGTTCCGGTGTGTGCACTTCCGCTAACTGCGC
ATGGCGTATTTTTTTTAAATCAGCCGACTCATGGTAGCTTCGATATTTCG
ACCAGTGATGCCTTTGAATATAGCTAATATGACAAGTTCAATTTCATTAA
TGGCTGAACCATCATCTTCAAAGCCTGTGCAAGCATTTTATTTGACCAAA
GTGTCCATCACCACCCGGGGACAAATATTTTTTGTAGCCATGGTTAAACG
GTTTTTTAGAACGTGATAGAAATCACTTGCTCTGGAAGCACCAGAAGAGC
CCAGGAACTTTCCGGAGAGAAAGTGGTGTTTTTTAGCTACTCTGGAAATC
TCCGGAAGATTCCTGTGTGCCGGGATGGGTCCTACCTTTTCCTGCCTATT
TGCTTTTCTATCTGCCATATAAATGCAAAAATACAGGAAGAAAAAGCTGT
GATTTTTCTTCTAAAAGTAACACTTTTAATATAATGCTAACTATTTATGT
AAGTTTTATATTAATGATATCTTGCATATTTTCCTATGGAAATTCGCCTT
CATTTTTGGACCTACCTCGGTGGGGTGGAGGTCCTATAAATTAACGTTCG
TTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTCGTTCGTTCGTTC
TCTTCGTTCGTTCGTTTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTC
GTTCGTTCGTTCGTTCGTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTT
CGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCG
TTCGTTCGTTTGTACAAAGATGTGTAACTATAAACCCTCGAATCTGACAG
AGCCCGATTTTTGAAAAAAAAAATTTGGGCAAATTTGGGCCAAAAAACGG
CTAAAAATCGGGTTATTTGGGACTTTGTGAAAAATTGGATCATTAACTTT
TTCTGATTTTTTGCATGAAAGTAGGGTACCATCATAGGTAAAAGATGGCT
CAAGCAGATTTTTGCAAAAAAATTTTGTTGGCTCAAAAAACGCAATTAAT
AAGCATACATCAATGTTCTTAGCCAAATTACTTTAATGGGATAAATTTTC
GCGGGGATTAATTTTCGCGGATTTCGCGGATTTGGGTGTCATCCGCGAAA
ATAAGTCCCATTGGAAATTTGAAAAAGGCCCATCCGCGAAATAATTCTAA
ACGAAACTCAAAATGTGTCAAATAAATACTATTTGAATGGTTACTTGCAT
CAAAGAGGCGCAAATAATGTGTATTTCAACAACCAATATGCATGATTTGA
CAGTAAAAGTCACAAAATCGAGAAAATAATGCCCCCCAATAGTGCCATCC
GCGAAAATTAATCCCCGCGAAATCTAAAAATTTCGCGGATGAGCTCAACC
GCGAAATTTAATCCCCGCGAAAATTTATCCCATTAAAGTACTCAAATTTT
TGATGAGATAGATTTTTTTTTGCTCACAAAGCCTTGAATATAAAAAAATA
TTTCAAGAGCATGAAATTTTGGTTTCTAAACGTTTTTTTTATAAGAAACA
AAGGACTAATTTTAATAGATCGTCACTATATGTGTTCTGAATGATTTTTT
AATGGTCACGCTCACGTAGATATCAATTATATATGTGTTAAATGCATAAA
CAGGTAGGTCCATAAAAGTATCACTTGTTTTGCATACAATCATGGTGGAT
GGTGGATGGAAAGACAAAAAAGGTCTATTACACCAAGTTAGTTCATAACA
AATTCGCATGCATCACCATGACCAAACACGTTTTCTTCAAAAATGGATTT
ATCTCTGCTTTCTTCTTTTTCTTGTTTCCATGAAACAGGAAAGTTTATCT
TCACTAGCGAGAGGGCTACTCTATTTTTGTTACAGAATTTCTCATGCACT
CTACATTACCTTACGGCTTTTGTGAAACGAACACAAGAAAGCAGATTGCA
TTCTGATCTTAAAATGCAAATTGCTTTAGGAAGAAAAGGGGGTAAACCAG
AATAAAAAATATAAAAAACTAGACTGAAATCGTCCACCAACTAGATATTC
AGGTCAAGTACAACACTTCTAGCTAGCTAGAGCAGCACAGAAAAAGGTAC
TTTTTTTGCTACCATTTGCATGGTAACCCAATCAATTTTACACCATAGGC
CATCATACATGTCTTGGCCTCCAGGAACCTTTTCACTGTACACCACCAGG
GTGTACCATTTCAAGAACTTTTTGCTTTGTAGACTTCTCTTTTAGAAAAT
CAATAAATTAAGATTTAAAATTTAGACTTCTCCTACAATAGACAATAATT
TCATATTTCAAAGAATTACAAATAATTTTTAAAAGGAAATTTGTACTGTG
CTACATGCTTTAAAGTAGCATTTACAACCATGCACCACACTCTCCCACTC
CCAGGATCCATATTACTTTTTTCCAATCAATGACCAATTGATAACCAATT
GCCGATAGATTGGATATCAATTCATTTAGATAATCAATAGACAATTGACA
ATCAAGATTTTATAGGAAGCTGGATTGATAGATTATATTCATAGATTGCT
ACAATTGATCACAATGGATAGCCAATTAATCGAAAAAAGCAATTTATGAT
CAATCACTAGATTTTAGAATAGCCTCAATTTCCTATCGATTATTAAAATT
AATCAATAACCAATCAATCTCTAGGCAGTCCTCCTAGAGAGTGCAAGCCT
AATATTTTTTCTCTTGTAGACTTCAGGGGAAAACAGGTGAATGATATTCT
TTGAAGGAAGAACTTACGAAAAGACTCGTCAACAAAAGGATGTCTTTTGA
GGCTGTTTGAGGTTTAGACTGGATCCTGTGAAAATGAAGAAAAAAATATA
CAATGGGTTCTTTTGTAAACTCCTAAACTCTAATTTTGTTCTTCTTCTCC
CCTCGAACCCTCGTACCTTAGGGTTTTGGGCATCCAAGTCACAAATCAGC
AAAAAATTGGTGTTTTCTGTAAATCTGAGAATCCCAATAAGATCTTCACT
GAATATAACAATGTAAAGCTAAGAACGATGGCCATCTCATATTACATAAT
GAGTGTTGATTAAAGTTCCTTAGGTTGAATTTTTATCTTCAAGTACTTTT
CATTAACTACTAGCCATGTTGAATGCACAAGAAATTATAGAACAAGGTAA
CAAACCTACTAGTCTACCAGATACTGGTGGTCTTAAATTCTTTAAAGTTA
ATGAGCATGACAAAGAACAAAAAGAGAGTATTGACTATACATTGGATAAT
TATGCGCAATGTCTTAAAGAGGAGCGTGTGTGCAGAAAAATGAATCTATC
AGTTGCTTCTTGGAAAGATGAACTCTCCCTTGCTCTTGTTACCTCAATGA
AAGGAAGTACAGTACAAAAATTTGGTTTTCAATCGAAAAATGGTAAATTT
CTATACGCTGAAGAATGTTTGTTTTTGATGGAGCAAGGCATATTGGAACT
TTTCGTGGATGAAGTCACTTTATCTTTACAAGAGGCTTTTTATTTGTTGC
TTCCTTTGCAACCCTCCTTTGAACATTATCAGATTTATACAAATCTTTGT
CGTCAAGGTTTTTTGGTCAATCGTTACCAACCCTCCTTAAATGAAGATGA
TGTTTCTACAGTAAATGAACATAATGAATTTCCAGATAATGAAAAACCAT
CAGCAGACCTGAATAAAATTAATATTGATGACACTTTAAAGAAAGGTTAT
ATGAAGGACTTATGGAAAGGTGACTTTACTCCTTTAATGCAACCTTCTGA
GTCAACATCTACAGCAGCCGTTCTTTCAAAGCTGCAAACATCAAAACTGA
TACATCTTAAAAAAGACAGTATGGAAGATAAACAAACCAAAGACCTTCCT
AAATTCAAAATCGATTTTGACGTATACACTTCAAAGGAATTACGTAAACA
AAATAAAGATACCAATGCTTCACCACAGTTTCGTGTCACAGTTTGTAAAT
ATGACCAGGACCCACCAACGTTCAAAGATTTGTCTCGTTTAACCAAAGAA
GCTGCGGGTGTTCACTTAAAAATAGGTGTGGTAAATCAAGGCACTGTTAC
TTTTTATGGCATGTTTTCTACTGACCTTCCAACTGTTATTTCTGTACCGT
GAAATATATTTTTCTTTTTTTTTACACTTTTTCACATTGTTATTTCTGTA
GCTTTTTTATTTGAAATTTTCTGTCCTTTTTTCCACCCAC Coding sequence (CDS) from alignment at sc0000114_pilon:682003..689392- >MSTRG.13978.3.p1 ID=MSTRG.13978.3.p1|Name=MSTRG.13978.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=987bp|location=Sequence derived from alignment at sc0000114_pilon:682003..689392- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGAATGCACAAGAAATTATAGAACAAGGTAACAAACCTACTAGTCT
ACCAGATACTGGTGGTCTTAAATTCTTTAAAGTTAATGAGCATGACAAAG
AACAAAAAGAGAGTATTGACTATACATTGGATAATTATGCGCAATGTCTT
AAAGAGGAGCGTGTGTGCAGAAAAATGAATCTATCAGTTGCTTCTTGGAA
AGATGAACTCTCCCTTGCTCTTGTTACCTCAATGAAAGGAAGTACAGTAC
AAAAATTTGGTTTTCAATCGAAAAATGGTAAATTTCTATACGCTGAAGAA
TGTTTGTTTTTGATGGAGCAAGGCATATTGGAACTTTTCGTGGATGAAGT
CACTTTATCTTTACAAGAGGCTTTTTATTTGTTGCTTCCTTTGCAACCCT
CCTTTGAACATTATCAGATTTATACAAATCTTTGTCGTCAAGGTTTTTTG
GTCAATCGTTACCAACCCTCCTTAAATGAAGATGATGTTTCTACAGTAAA
TGAACATAATGAATTTCCAGATAATGAAAAACCATCAGCAGACCTGAATA
AAATTAATATTGATGACACTTTAAAGAAAGGTTATATGAAGGACTTATGG
AAAGGTGACTTTACTCCTTTAATGCAACCTTCTGAGTCAACATCTACAGC
AGCCGTTCTTTCAAAGCTGCAAACATCAAAACTGATACATCTTAAAAAAG
ACAGTATGGAAGATAAACAAACCAAAGACCTTCCTAAATTCAAAATCGAT
TTTGACGTATACACTTCAAAGGAATTACGTAAACAAAATAAAGATACCAA
TGCTTCACCACAGTTTCGTGTCACAGTTTGTAAATATGACCAGGACCCAC
CAACGTTCAAAGATTTGTCTCGTTTAACCAAAGAAGCTGCGGGTGTTCAC
TTAAAAATAGGTGTGGTAAATCAAGGCACTGTTACTTTTTATGGCATGTT
TTCTACTGACCTTCCAACTGTTATTTCTGTACCGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000114_pilon | genome | sc0000114_pilon:682003..689392 - |
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