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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000114_pilon:677728..681804- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13978.1.p1 ID=MSTRG.13978.1.p1|Name=MSTRG.13978.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4077bp|location=Sequence derived from alignment at sc0000114_pilon:677728..681804- (Clytia hemisphaerica_ch_hm2_pilon)
TGAATAGAAAACAAAAAAACACAAGAAAAATATGGAAATTATATTATAAG
CAGCCAGCCTGCACTTGGTATGCAAGAAATCATGAAGACACTGTTTCGTT
TAGCTGTTATCGTCATCTCAATTTGTCTACTAATCATCACCTATACACTG
ACAACCTCCAAAGAGAACGCATACTCTAAGTTTTCATACTCTAATGACAA
GTAAGAATCTTTTTTTCAATTTCTTTCAGTCCTGATTTTAAAATCCCCTT
TTAAATCATATCCTATCTGTGTTTGAACTGAAGCCACTTGTCCTAGTTTT
TCGTCAATTTAAGGTAATGTCTTTCCTTACGTTTGATTTTTTTTAGAAAA
GACCAGTAATATTTTCAATTTATCCATTGAAATGGTGTTCATAAATAGGT
TTCTTTTCCTACACTAGACTTGCTCCAAAGAATGTTGATAAATTTGAGAT
ACATCACATTGATCAAAAGAGTCGTGATGCAATCGAATCAAATTGGGATC
AATTTTTCGGAGTCACTCGTTCAAATAGAAGGTACAATTAGCTGGTTTAT
CCATTATGTAAAAATAGAGTGGAATTATACTTCTACGAATTCTTCGCTAG
CTGAGTATCCCTTATTGTGAGAGCGTTCGTCGGTAAAAAGTGACGAAAGA
AATCGTGACCAAAGTATTTACCCTCAAATTTTTGAAGCCGAGAAACTTTT
TACCAATGATTAATTTTGACTAAGAAATCTTTTTTACCAAATAATTACTG
GTTACTTTGAACATTTTTTCGTTTAAGGTATTTGTAACACTCTTTTTCCG
ATTTTTTTTGTCAACAAATCTTTTACCGACAATTTTTTACCAATAAGATA
TTGACATACAAGATGAATTGAATGTACTCATTGTGAAAAAAATCGAATAA
AACTGAATGTTAAAAGTTATTTTGTCGAATAAATGTTGTTGTGTCATTAT
CAAACAAAAACAATTTTACTCAAGAATTCTTTTAAAGTTCTCCATTTTCC
AGAGGGAACGATGGTGCACAGGAAGTGGATCCTGAAGTCAATGAGAATGA
AGAAGAAAATGAAGAGGAAGAAGACTCCAAGCGATTAAAAACAGGTGAGC
ATGATATTTAAACCTTTAGTCGATGGTACCCTCCGAAAGAGCTGGTACCC
GAATATTGACTAAGCATTAATTTTCTAGTTAGAATTGTGCATTTTCTTTT
TCCGTATTTCCTTTCAAAGGAGAATTTGTCTAAACTACATTGAGTTTGGA
AGTTTATTTATTTCAGTAGTAGTAGACGTTAAAAGCATTCAATATTTACC
ATGGGGAATCGACGTCTTTCAAGGTTGGGGACAACCTCGTCCTTGTGTAT
CCCAGGCTTTGCTTGCGTTCCTAACGGACACCAGAGTATTATCTGGCGGA
ATCAGTAACCATAAAAGCTGTTAATACGCAGGAACAGAGCCTTGGTTTAG
GATGCCAAGAAAGGTGGTCTTCAAAAGACCCTTTCCGCACTGCTCAGTCT
AGATTTCCAAATTAAAAAGTGATTTTTTTTAGATGGGGCAGACGAAGAAG
AGGAACAATGGGAGAAATATTTAATGAAACATCCAACAGCAAAGAAAGGA
TTGAAAAATGGTGAAGACGTCTTACAAAAGAAACACAAAGCTAACAAGAA
GAACAAAGGATCTCGTCATATCGAGGAAGAAAAAAGAAACAAAGAATCTT
TGAAAGTTGACCGAAAATTGGAACATGTCCGTAAAAAGAAAGCTCGGCTA
AAGATGAAAATTATATTAATTTATACTGGACTCCACAAGAAAGTTTATTG
GTATAATTTACCTAAGAATGAAACCAAAAGTTATTTGAGGCGTACCAAAT
GCCCACAAACAAAATGCCATATAACTTATGATAAACAATTACTGCCATTA
GCTGATGCTGTAATATTTCACGAGAGGAATATGCCTAGTCTGGATATGCT
ACGTATATTAACGAGGCGACAAAACAGACCTATATCCCAACGTTGGATTT
ACTTCACATCTGAGACACCCAAGAACTCTGCTATATCATCAGTACCCTAT
GATGGGCTTTTTAACTGGACCATGACTTATAGGACGGATAGTGATATTTA
TTTACCCTATTTACAATATAGAGAATTAGATCAAAATGAAAAACCAACAC
CTGTTATAAATCATGCGAAAACGAAAAATAGTACCATTGCTTGGTTAGTT
GGTAATTGTAATTTTGGTTTTCGAATGAAATTTGCCACCCTGTTAGCGTT
GGAAACGAAAGTATTTGTTGGTGGCGGTTGTCGTGACAATTACCCAGATC
GTTTGCCATGTACAAGATGGTGTGGTTTAGATACATTAAAAACATACAAA
TTCTACTTATCCTTTGAGAATGGTGTTTGTACAGACTATATCACAGAAAA
ATATTGGAGATACTTAGAATTGGGTCTAGTGCCTATAGTGTTGGGTGGCG
CTGATTATAGCAATCCGAAACTTGCTATACCGGGATCATTCATAGATGCT
TCTAAATTCAAAACGGTCAAAGATTTAGCTAAATATGTTGAGTATTTGGA
TAAAAATGATACAGCTTATAACGAATATTTTACATGGAAACAAAAGTATA
AAATATGGCATCCACCGACTGGGGATTGGCCTTTTGAGAGTTATATGATG
TGTGAGATATGCATGAAATTGTTTTCCAATCCACCTCCCAAAATGTATAC
AAAATTATCCAATTTTTGGAATATACATACAGATTGTGAGATTCCTGAAA
ATGATTTAACTGATAAGTTTATTCCCAAAGATTTCGATAAAAATCAAGTT
GATAAGGATGAATTGGAACGTATGAAACATTCGAAAGATAACATTCCCAA
AGATTTTGATGAGGAGGATTGATGATGGGGTATCTGGCATTGCTGAGTGT
TATACCCTTTTTTCTTTCCATACGTTTTTTATAAGAGTATTCAAAAATTT
GTAAGCCTTCAGTTGTTCTTGACTTATTGAGTTTCGAGCTTAAAAATGTT
CTTAGAATGTTCTTAGCCGTTTCACCATTTTGTGAGTAGCTTAGTGCAAT
TTACCAAGAAAGTGCCTTAAAATAAACTTGTTCTTTATGTTATACGGCCA
TCGAAGCCTTACGTTCTTACTTAGTTTAATTGTTAATATAATTTAATTTG
TGTAAAAGATCGCCTCTACAGATTCGAACGTTTGCTTCCATCATAATGGT
GAGAATTACGTAAAACATGAAAAATCTCTTCTACATAACATGTCAAAGTG
TGAATAATATCTCAAATATCAAGTCTTTTTGCCCAGTATCTTCCTTTACC
AGACCAACACGAGTTTTCTCTCCTTCGACGATGTACCCTGTAAAAGCATA
TTTTTGGAATGTCGGCCTCTCTAAGGTTCCACGTTAATTGTAGATCCTCA
CAGGGAATTGATAGTAGGGGATAGAAAGGCAAAAGTAAAATAAGAAGAAA
ATCAAAATGGGAAGTTTTTGAAAACACAGGTATCAATTTAGTACCACCAA
CGAAATTGCTGCCTTCGTTGAAATTTGAATCCTAATCTAACTCTTAACCC
CCCCCCCCGAATTATTAGTTGTTATTGTTTCAGATTTTGGTATTTAAATT
TTTTTGTATATTTTGTCTTTACATTTGTCTTTATATTTTGAAAAATTAAA
TGTTTTTTAGATAGGATAGGTAGTATTATTCTTCATATAAGCCAGAACCC
GTGGTACTATTTATTTATTATAAGGAGAAAAAAATTTTGGATGGCATTTT
TAATAAAACTTTGTTTTAGTAAACTTTTTTATTCAGCTGACTCAAGCCTT
AATCTTGATTTTTTTGTTTGTTTTATTTGGTGAATATATTTTTCCTTTGT
ATAATATTAGATTATTAGATATTTGGTAACGATTCTTTTGTATTTTTTAT
TTTGTATTGTATATGTTATATTTGTTTTTATCTATCTTTTGGTCTATTCG
AGTACTGTTTGATACCTTTTAAACGTACTATCAGATTATTAACAATATTT
TTTGCCTTATTTTTTTCAAAATTTGTCTCGAGATATTATTCAAATATCAA
AATTTACTTTAAACAAGAAAAAACTAA Coding sequence (CDS) from alignment at sc0000114_pilon:677728..681804- >MSTRG.13978.1.p1 ID=MSTRG.13978.1.p1|Name=MSTRG.13978.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6348bp|location=Sequence derived from alignment at sc0000114_pilon:677728..681804- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGGCAGACGAAGAAGAGGAACAATGGGAGAAATATTTAATGAAACAT
CCAACAGCAAAGAAAGGATTGAAAAATGGTGAAGACGTCTTACAAAAGAA
ACACAAAGCTAACAAGAAGAACAAAGGATCTCGTCATATCGAGGAAGAAA
AAAGAAACAAAGAATCTTTGAAAGTTGACCGAAAATTGGAACATGTCCGT
AAAAAGAAAGCTCGGCTAAAGATGAAAATTATATTAATTTATACTGGACT
CCACAAGAAAGTTTATTGGTATAATTTACCTAAGAATGAAACCAAAAGTT
ATTTGAGGCGTACCAAATGCCCACAAACAAAATGCCATATAACTTATGAT
AAACAATTACTGCCATTAGCTGATGCTGTAATATTTCACGAGAGGAATAT
GCCTAGTCTGGATATGCTACGTATATTAACGAGGCGACAAAACAGACCTA
TATCCCAACGTTGGATTTACTTCACATCTGAGACACCCAAGAACTCTGCT
ATATCATCAGTACCCTATGATGGGCTTTTTAACTGGACCATGACTTATAG
GACGGATAGTGATATTTATTTACCCTATTTACAATATAGAGAATTAGATC
AAAATGAAAAACCAACACCTGTTATAAATCATGCGAAAACGAAAAATAGT
ACCATTGCTTGGTTAGTTGGTAATTGTAATTTTGGTTTTCGAATGAAATT
TGCCACCCTGTTAGCGTTGGAAACGAAAGTATTTGTTGGTGGCGGTTGTC
GTGACAATTACCCAGATCGTTTGCCATGTACAAGATGGTGTGGTTTAGAT
ACATTAAAAACATACAAATTCTACTTATCCTTTGAGAATGGTGTTTGTAC
AGACTATATCACAGAAAAATATTGGAGATACTTAGAATTGGGTCTAGTGC
CTATAGTGTTGGGTGGCGCTGATTATAGCAATCCGAAACTTGCTATACCG
GGATCATTCATAGATGCTTCTAAATTCAAAACGGTCAAAGATTTAGCTAA
ATATGTTGAGTATTTGGATAAAAATGATACAGCTTATAACGAATATTTTA
CATGGAAACAAAAGTATAAAATATGGCATCCACCGACTGGGGATTGGCCT
TTTGAGAGTTATATGATGTGTGAGATATGCATGAAATTGTTTTCCAATCC
ACCTCCCAAAATGTATACAAAATTATCCAATTTTTGGAATATACATACAG
ATTGTGAGATTCCTGAAAATGATTTAACTGATAAGTTTATTCCCAAAGAT
TTCGATAAAAATCAAGTTGATAAGGATGAATTGGAACGTATGAAACATTC
GAAAGATAACATTCCCAAAGATTTTGATGAGGAGGATTGATTCTCCATTT
TCCAGAGGGAACGATGGTGCACAGGAAGTGGATCCTGAAGTCAATGAGAA
TGAAGAAGAAAATGAAGAGGAAGAAGACTCCAAGCGATTAAAAACAGGTT
TCTTTTCCTACACTAGACTTGCTCCAAAGAATGTTGATAAATTTGAGATA
CATCACATTGATCAAAAGAGTCGTGATGCAATCGAATCAAATTGGGATCA
ATTTTTCGGAGTCACTCGTTCAAATAGAAGATGACAAATGGGGCAGACGA
AGAAGAGGAACAATGGGAGAAATATTTAATGAAACATCCAACAGCAAAGA
AAGGATTGAAAAATGGTGAAGACGTCTTACAAAAGAAACACAAAGCTAAC
AAGAAGAACAAAGGATCTCGTCATATCGAGGAAGAAAAAAGAAACAAAGA
ATCTTTGAAAGTTGACCGAAAATTGGAACATGTCCGTAAAAAGAAAGCTC
GGCTAAAGATGAAAATTATATTAATTTATACTGGACTCCACAAGAAAGTT
TATTGGTATAATTTACCTAAGAATGAAACCAAAAGTTATTTGAGGCGTAC
CAAATGCCCACAAACAAAATGCCATATAACTTATGATAAACAATTACTGC
CATTAGCTGATGCTGTAATATTTCACGAGAGGAATATGCCTAGTCTGGAT
ATGCTACGTATATTAACGAGGCGACAAAACAGACCTATATCCCAACGTTG
GATTTACTTCACATCTGAGACACCCAAGAACTCTGCTATATCATCAGTAC
CCTATGATGGGCTTTTTAACTGGACCATGACTTATAGGACGGATAGTGAT
ATTTATTTACCCTATTTACAATATAGAGAATTAGATCAAAATGAAAAACC
AACACCTGTTATAAATCATGCGAAAACGAAAAATAGTACCATTGCTTGGT
TAGTTGGTAATTGTAATTTTGGTTTTCGAATGAAATTTGCCACCCTGTTA
GCGTTGGAAACGAAAGTATTTGTTGGTGGCGGTTGTCGTGACAATTACCC
AGATCGTTTGCCATGTACAAGATGGTGTGGTTTAGATACATTAAAAACAT
ACAAATTCTACTTATCCTTTGAGAATGGTGTTTGTACAGACTATATCACA
GAAAAATATTGGAGATACTTAGAATTGGGTCTAGTGCCTATAGTGTTGGG
TGGCGCTGATTATAGCAATCCGAAACTTGCTATACCGGGATCATTCATAG
ATGCTTCTAAATTCAAAACGGTCAAAGATTTAGCTAAATATGTTGAGTAT
TTGGATAAAAATGATACAGCTTATAACGAATATTTTACATGGAAACAAAA
GTATAAAATATGGCATCCACCGACTGGGGATTGGCCTTTTGAGAGTTATA
TGATGTGTGAGATATGCATGAAATTGTTTTCCAATCCACCTCCCAAAATG
TATACAAAATTATCCAATTTTTGGAATATACATACAGATTGTGAGATTCC
TGAAAATGATTTAACTGATAAGTTTATTCCCAAAGATTTCGATAAAAATC
AAGTTGATAAGGATGAATTGGAACGTATGAAACATTCGAAAGATAACATT
CCCAAAGATTTTGATGAGGAGGATTGATTCTCCATTTTCCAGAGGGAACG
ATGGTGCACAGGAAGTGGATCCTGAAGTCAATGAGAATGAAGAAGAAAAT
GAAGAGGAAGAAGACTCCAAGCGATTAAAAACAGGTTTCTTTTCCTACAC
TAGACTTGCTCCAAAGAATGTTGATAAATTTGAGATACATCACATTGATC
AAAAGAGTCGTGATGCAATCGAATCAAATTGGGATCAATTTTTCGGAGTC
ACTCGTTCAAATAGAAGATGACAAATGGGGCAGACGAAGAAGAGGAACAA
TGGGAGAAATATTTAATGAAACATCCAACAGCAAAGAAAGGATTGAAAAA
TGGTGAAGACGTCTTACAAAAGAAACACAAAGCTAACAAGAAGAACAAAG
GATCTCGTCATATCGAGGAAGAAAAAAGAAACAAAGAATCTTTGAAAGTT
GACCGAAAATTGGAACATGTCCGTAAAAAGAAAGCTCGGCTAAAGATGAA
AATTATATTAATTTATACTGGACTCCACAAGAAAGTTTATTGGTATAATT
TACCTAAGAATGAAACCAAAAGTTATTTGAGGCGTACCAAATGCCCACAA
ACAAAATGCCATATAACTTATGATAAACAATTACTGCCATTAGCTGATGC
TGTAATATTTCACGAGAGGAATATGCCTAGTCTGGATATGCTACGTATAT
TAACGAGGCGACAAAACAGACCTATATCCCAACGTTGGATTTACTTCACA
TCTGAGACACCCAAGAACTCTGCTATATCATCAGTACCCTATGATGGGCT
TTTTAACTGGACCATGACTTATAGGACGGATAGTGATATTTATTTACCCT
ATTTACAATATAGAGAATTAGATCAAAATGAAAAACCAACACCTGTTATA
AATCATGCGAAAACGAAAAATAGTACCATTGCTTGGTTAGTTGGTAATTG
TAATTTTGGTTTTCGAATGAAATTTGCCACCCTGTTAGCGTTGGAAACGA
AAGTATTTGTTGGTGGCGGTTGTCGTGACAATTACCCAGATCGTTTGCCA
TGTACAAGATGGTGTGGTTTAGATACATTAAAAACATACAAATTCTACTT
ATCCTTTGAGAATGGTGTTTGTACAGACTATATCACAGAAAAATATTGGA
GATACTTAGAATTGGGTCTAGTGCCTATAGTGTTGGGTGGCGCTGATTAT
AGCAATCCGAAACTTGCTATACCGGGATCATTCATAGATGCTTCTAAATT
CAAAACGGTCAAAGATTTAGCTAAATATGTTGAGTATTTGGATAAAAATG
ATACAGCTTATAACGAATATTTTACATGGAAACAAAAGTATAAAATATGG
CATCCACCGACTGGGGATTGGCCTTTTGAGAGTTATATGATGTGTGAGAT
ATGCATGAAATTGTTTTCCAATCCACCTCCCAAAATGTATACAAAATTAT
CCAATTTTTGGAATATACATACAGATTGTGAGATTCCTGAAAATGATTTA
ACTGATAAGTTTATTCCCAAAGATTTCGATAAAAATCAAGTTGATAAGGA
TGAATTGGAACGTATGAAACATTCGAAAGATAACATTCCCAAAGATTTTG
ATGAGGAGGATTGATTCTCCATTTTCCAGAGGGAACGATGGTGCACAGGA
AGTGGATCCTGAAGTCAATGAGAATGAAGAAGAAAATGAAGAGGAAGAAG
ACTCCAAGCGATTAAAAACAGGTTTCTTTTCCTACACTAGACTTGCTCCA
AAGAATGTTGATAAATTTGAGATACATCACATTGATCAAAAGAGTCGTGA
TGCAATCGAATCAAATTGGGATCAATTTTTCGGAGTCACTCGTTCAAATA
GAAGATGACAAATGGGGCAGACGAAGAAGAGGAACAATGGGAGAAATATT
TAATGAAACATCCAACAGCAAAGAAAGGATTGAAAAATGGTGAAGACGTC
TTACAAAAGAAACACAAAGCTAACAAGAAGAACAAAGGATCTCGTCATAT
CGAGGAAGAAAAAAGAAACAAAGAATCTTTGAAAGTTGACCGAAAATTGG
AACATGTCCGTAAAAAGAAAGCTCGGCTAAAGATGAAAATTATATTAATT
TATACTGGACTCCACAAGAAAGTTTATTGGTATAATTTACCTAAGAATGA
AACCAAAAGTTATTTGAGGCGTACCAAATGCCCACAAACAAAATGCCATA
TAACTTATGATAAACAATTACTGCCATTAGCTGATGCTGTAATATTTCAC
GAGAGGAATATGCCTAGTCTGGATATGCTACGTATATTAACGAGGCGACA
AAACAGACCTATATCCCAACGTTGGATTTACTTCACATCTGAGACACCCA
AGAACTCTGCTATATCATCAGTACCCTATGATGGGCTTTTTAACTGGACC
ATGACTTATAGGACGGATAGTGATATTTATTTACCCTATTTACAATATAG
AGAATTAGATCAAAATGAAAAACCAACACCTGTTATAAATCATGCGAAAA
CGAAAAATAGTACCATTGCTTGGTTAGTTGGTAATTGTAATTTTGGTTTT
CGAATGAAATTTGCCACCCTGTTAGCGTTGGAAACGAAAGTATTTGTTGG
TGGCGGTTGTCGTGACAATTACCCAGATCGTTTGCCATGTACAAGATGGT
GTGGTTTAGATACATTAAAAACATACAAATTCTACTTATCCTTTGAGAAT
GGTGTTTGTACAGACTATATCACAGAAAAATATTGGAGATACTTAGAATT
GGGTCTAGTGCCTATAGTGTTGGGTGGCGCTGATTATAGCAATCCGAAAC
TTGCTATACCGGGATCATTCATAGATGCTTCTAAATTCAAAACGGTCAAA
GATTTAGCTAAATATGTTGAGTATTTGGATAAAAATGATACAGCTTATAA
CGAATATTTTACATGGAAACAAAAGTATAAAATATGGCATCCACCGACTG
GGGATTGGCCTTTTGAGAGTTATATGATGTGTGAGATATGCATGAAATTG
TTTTCCAATCCACCTCCCAAAATGTATACAAAATTATCCAATTTTTGGAA
TATACATACAGATTGTGAGATTCCTGAAAATGATTTAACTGATAAGTTTA
TTCCCAAAGATTTCGATAAAAATCAAGTTGATAAGGATGAATTGGAACGT
ATGAAACATTCGAAAGATAACATTCCCAAAGATTTTGATGAGGAGGATTG
ATTCTCCATTTTCCAGAGGGAACGATGGTGCACAGGAAGTGGATCCTGAA
GTCAATGAGAATGAAGAAGAAAATGAAGAGGAAGAAGACTCCAAGCGATT
AAAAACAGGTTTCTTTTCCTACACTAGACTTGCTCCAAAGAATGTTGATA
AATTTGAGATACATCACATTGATCAAAAGAGTCGTGATGCAATCGAATCA
AATTGGGATCAATTTTTCGGAGTCACTCGTTCAAATAGAAGATGACAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000114_pilon | genome | sc0000114_pilon:677728..681804 - |
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