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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000114_pilon:438252..440661+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13959.1.p1 ID=MSTRG.13959.1.p1|Name=MSTRG.13959.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2410bp|location=Sequence derived from alignment at sc0000114_pilon:438252..440661+ (Clytia hemisphaerica_ch_hm2_pilon)
GCAACATCATATCATTCACATTTAACTCGTCAATAAGCAAACATACAACT
ttacaaacttttgcgattttaagcctcgttttgATGTGTACAAAGACGAT
GATGGCAAACGATAAATCACCATTCTCCATCGATTGGATTCTACGCAAAG
AGAGCGGCTTGGATCGCGTGGATAAAATCAAAAACGTCATTCGCGTTTAT
GAGCAAGCCAACCCCTTCAGATACCCTTCCTGTTATAAGGACTTATCTTT
GGTCAAATACAAGTTGGACAAATGTTGTCCACCATCAAGACAGAATCCGC
TTCACACTTTGCAGCGATCAAGGTCACCCGTTTCTCCTGCAAAGTCTCAT
ACAACCATATCGTCCATCAGTAAACCCCCGTCACCTCTCCATTCATCTTG
CACATGTCACACGAAGGTTGACATCAAAGACGGGGGTCATGTTGTTGAGA
AATCGGGGTACGAAGATCACAATATGAATAGCTATGATGATGTTTTTGTA
GAAGAGCGTATCACAATGACATCACTCAATACTAAAGCAAAAGGTAAGCA
TTTCCTCCGAGAATTTCTAATTTCAACAACTTTCTAACTATTGGAAGTTG
ATAACGCTCTTCGTTTTAATAGACCCTTCTCTCGAACTTTTCTCTCCTTT
TTACACGATGTAGATCTATCAAGAAGTTTATCAACGAGTTCATCAAACTG
TTCGGATCTTTCTGCACCAAGTCCTCGCTCTGATGAAGAGGGAAGTGAAA
CATTCGCACATGGTAGACGAAACCGAACCATTTTTACCAAGAAACAAGCC
TCTGAACTCGAACGCGTCTTCCAAACCACTCACTATCCCGACCTTAAATG
CCGACACGAAATCTCCAAAGTCACCAAATTATCGGAAAATAGGATTCAGG
TACGTTACACATTTACGTTTGCTCTTATAATAGTTTTTGAGGAGAATGAC
ATGAACAAAATGTGTCCAGAAGTTCTGTAAACATGCGACGAaactaaaat
gttaaaaagaaatatttacagcggttcataaaaataaaacccttGAGAAA
TAGTGCTGGTGAGCAATTATCATTAAATTTCTATTGGCTTTTTCTCTTTG
AGTGGCATCAAGCATAAATTCGTTTTTAATTAATCATTACTAATTAGCCT
TGAAGTGAATTGCTTGATCGCGTTAATGAGCAAAAGACAGAAATAGAATT
GAAACAATGCTTTTGAAACAATGTGCATGCTTTTGTTTCATTGATTAGTA
TTGTCATTAGCAGTAAACGCACGCGTCCAATTAAAGCGTACCAATCAAAT
GTGAAACTCTTGGTTGAATCTTTTTAGTTTCCAGGTCTCTCAGTGTCCAG
TCTCAAtctcaaacaaaacaaaacaaaacaaaatgaacaatattgcacaa
taatttcaaaagctCACCCATCTAATTTTCGACATATACAAAAATGAAGC
CAAAATTGTTGTGTTCGGAGCAACACTATTTGGTGACTTTGATCACTTGG
CAACCTgacatgaaaatttctaaatggcTAATCTCAATGTCTTGACAACG
CAATTAAGAAAAAGCCAATAAAGATCTCGCCATTAATATTTGCGCAATGA
TGGAACATTAATCTTGCGGCCACCAGAAAAAGGGAGAAATGACTAAAAAA
CGAGTAATAACTGACCGGCTGAAAGGGGCTTAGCTAGGCAACAACGAACA
AAGAGCAATAAAATATCGACActcgttaaaaattttcttttcaacaaaCG
ATTCAGCCAATTGCTCTACCACAAGTTACTTACTTAAAACCGTAAATGAC
GCATGAAAGAGACTGGACCCTAATTATGGTAATGAAGTCGAACAGCCTCC
GTTTAATGAGCTGTGGTGTGCTAATTTGAATTTCAAtcgattaaaatttt
aattgctaACTTTCGTAAACTATAAATCAGGTTAATAAGGCACCTCAAAT
CAtaattaaaatgttttgttaACTACCCGCTAAAAATAACTCTACCAGTA
CCAGGCTCCAAAATCTTTATCCCAAACGAtttataatatcaatttttcct
tttcttttttccaggtTTGGTTTCAAAATCGTCGTGCTAAATGGAGACGA
ACGGAAAAAACGTGGGGCGAAGGCTCGGTGATGGCGAAATACGGCCTTTA
CGGTGCCATGGTCCGTCATTCATTGAAAACACGGAAAAGTGAGAATGAAA
CGAGTTAGACACTCAATACTCGGAACTTTGTACAAATATTAGAGATTATT
TTTCAGAGTTTATATGTTCTTCTTGTATATAAAATATGACTTTTTGGTAA
AATGAGaattgtaaattttataattattttcaaatgatttatatttgttt
caaatttaaaaatttaacttgCAGTGAATTTAATAATATCTTTTTATTAT
CGAATGAATC Coding sequence (CDS) from alignment at sc0000114_pilon:438252..440661+ >MSTRG.13959.1.p1 ID=MSTRG.13959.1.p1|Name=MSTRG.13959.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2763bp|location=Sequence derived from alignment at sc0000114_pilon:438252..440661+ (Clytia hemisphaerica_ch_hm2_pilon)
AACATCATATCATTCACATTTAACTCGTCAATAAGCAAACATACAACTtt
acaaacttttgcgattttaagcctcgttttgATGTGTACAAAGACGATGA
TGGCAAACGATAAATCACCATTCTCCATCGATTGGATTCTACGCAAAGAG
AGCGGCTTGGATCGCGTGGATAAAATCAAAAACGTCATTCGCGTTTATGA
GCAAGCCAACCCCTTCAGATACCCTTCCTGTTATAAGGACTTATCTTTGG
TCAAATACAAGTTGGACAAATGTTGTCCACCATCAAGACAGAATCCGCTT
CACACTTTGCAGCGATCAAGGTCACCCGTTTCTCCTGCAAAGTCTCATAC
AACCATATCGTCCATCAGTAAACCCCCGTCACCTCTCCATTCATCTTGCA
CATGTCACACGAAGGTTGACATCAAAGACGGGGGTCATGTTGTTGAGAAA
TCGGGGTACGAAGATCACAATATGAATAGCTATGATGATGTTTTTGTAGA
AGAGCGTATCACAATGACATCACTCAATACTAAAGCAAAAGATCTATCAA
GAAGTTTATCAACGAGTTCATCAAACTGTTCGGATCTTTCTGCACCAAGT
CCTCGCTCTGATGAAGAGGGAAGTGAAACATTCGCACATGGTAGACGAAA
CCGAACCATTTTTACCAAGAAACAAGCCTCTGAACTCGAACGCGTCTTCC
AAACCACTCACTATCCCGACCTTAAATGCCGACACGAAATCTCCAAAGTC
ACCAAATTATCGGAAAATAGGATTCAGgtTTGGTTTCAAAATCGTCGTGC
TAAATGGAGACGAACGGAAAAAACGTGGGGCGAAGGCTCGGTGATGGCGA
AATACGGCCTTTACGGTGCCATGGTCCGTCATTCATTGAAAACACGGAAA
AGTGAGAATGAAACGAGTTAGAACATCATATCATTCACATTTAACTCGTC
AATAAGCAAACATACAACTttacaaacttttgcgattttaagcctcgttt
tgATGTGTACAAAGACGATGATGGCAAACGATAAATCACCATTCTCCATC
GATTGGATTCTACGCAAAGAGAGCGGCTTGGATCGCGTGGATAAAATCAA
AAACGTCATTCGCGTTTATGAGCAAGCCAACCCCTTCAGATACCCTTCCT
GTTATAAGGACTTATCTTTGGTCAAATACAAGTTGGACAAATGTTGTCCA
CCATCAAGACAGAATCCGCTTCACACTTTGCAGCGATCAAGGTCACCCGT
TTCTCCTGCAAAGTCTCATACAACCATATCGTCCATCAGTAAACCCCCGT
CACCTCTCCATTCATCTTGCACATGTCACACGAAGGTTGACATCAAAGAC
GGGGGTCATGTTGTTGAGAAATCGGGGTACGAAGATCACAATATGAATAG
CTATGATGATGTTTTTGTAGAAGAGCGTATCACAATGACATCACTCAATA
CTAAAGCAAAAGATCTATCAAGAAGTTTATCAACGAGTTCATCAAACTGT
TCGGATCTTTCTGCACCAAGTCCTCGCTCTGATGAAGAGGGAAGTGAAAC
ATTCGCACATGGTAGACGAAACCGAACCATTTTTACCAAGAAACAAGCCT
CTGAACTCGAACGCGTCTTCCAAACCACTCACTATCCCGACCTTAAATGC
CGACACGAAATCTCCAAAGTCACCAAATTATCGGAAAATAGGATTCAGgt
TTGGTTTCAAAATCGTCGTGCTAAATGGAGACGAACGGAAAAAACGTGGG
GCGAAGGCTCGGTGATGGCGAAATACGGCCTTTACGGTGCCATGGTCCGT
CATTCATTGAAAACACGGAAAAGTGAGAATGAAACGAGTTAGAACATCAT
ATCATTCACATTTAACTCGTCAATAAGCAAACATACAACTttacaaactt
ttgcgattttaagcctcgttttgATGTGTACAAAGACGATGATGGCAAAC
GATAAATCACCATTCTCCATCGATTGGATTCTACGCAAAGAGAGCGGCTT
GGATCGCGTGGATAAAATCAAAAACGTCATTCGCGTTTATGAGCAAGCCA
ACCCCTTCAGATACCCTTCCTGTTATAAGGACTTATCTTTGGTCAAATAC
AAGTTGGACAAATGTTGTCCACCATCAAGACAGAATCCGCTTCACACTTT
GCAGCGATCAAGGTCACCCGTTTCTCCTGCAAAGTCTCATACAACCATAT
CGTCCATCAGTAAACCCCCGTCACCTCTCCATTCATCTTGCACATGTCAC
ACGAAGGTTGACATCAAAGACGGGGGTCATGTTGTTGAGAAATCGGGGTA
CGAAGATCACAATATGAATAGCTATGATGATGTTTTTGTAGAAGAGCGTA
TCACAATGACATCACTCAATACTAAAGCAAAAGATCTATCAAGAAGTTTA
TCAACGAGTTCATCAAACTGTTCGGATCTTTCTGCACCAAGTCCTCGCTC
TGATGAAGAGGGAAGTGAAACATTCGCACATGGTAGACGAAACCGAACCA
TTTTTACCAAGAAACAAGCCTCTGAACTCGAACGCGTCTTCCAAACCACT
CACTATCCCGACCTTAAATGCCGACACGAAATCTCCAAAGTCACCAAATT
ATCGGAAAATAGGATTCAGgtTTGGTTTCAAAATCGTCGTGCTAAATGGA
GACGAACGGAAAAAACGTGGGGCGAAGGCTCGGTGATGGCGAAATACGGC
CTTTACGGTGCCATGGTCCGTCATTCATTGAAAACACGGAAAAGTGAGAA
TGAAACGAGTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000114_pilon | genome | sc0000114_pilon:438252..440661 + |
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