|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000114_pilon:295552..298693- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13949.1.p1 ID=MSTRG.13949.1.p1|Name=MSTRG.13949.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3142bp|location=Sequence derived from alignment at sc0000114_pilon:295552..298693- (Clytia hemisphaerica_ch_hm2_pilon)
ATTTCTTTTATTTATTTATTCGATGTTGAAATATATACATGGTATATACA
AAGTTGAAAAAAACAATCTATTTATCAGCAGATATAAAGTAAGCTAGCAT
TACACTTACACAAACAGTGTTCACAAGTCTTTTGTAGAAGGCATATAACT
TAGTTTACTTTGAATGATCGGCAAACAAACTAATTTCTTTTGTGAGGAAT
TTTTCAGAAACTATTTCTATTTTAAATAGACTTGACGAGCCCTAACGAGG
CTTCAGTTGACTTGGAGTCTAACATAGCGACGACTGGCTTGTAAGAAAGC
ATACTTTTTGATTATTATTATTGAACAGACTTCTTGGCAAATATGAGTGG
ATTTTTGATCGAGAATTTACTGAAAGACGATGGAAGGAGGTTTCAGGAGA
AAACGGATTACACATTGCGTGAAGGTTCAGAATCAATAGACGAACACAGA
CACAGTCCACCGTTTGACTTGACGCCGTCACCCGTACGCGAAACGCCGTG
CAAATCACGACACGTTTACCAAGAAGAAGATTTCGTGCATCTTTTACATC
AACATCATCGTAACGACCATGTGTCCATACGGGGCGCCAAAATGTCCAAT
ATCTGTGAAAAGGACCTTTCATGCAAATGTGAGATTTGTGTGTGCATGTT
GTGTTATGAATGGCATTCGACCTGGAAAAGATCCAACCTTTCACGATTTC
AAAAACATTCATTGAGCATCAAAAATATCCACCCAAAGCATTGCTCTAGA
GGTAATAATGAATTGATTTTTTTGAAGGATTGAGAGAGCGAAAGAGTCAG
ACACGTGATTTAGAAGAAGTGAAGTGGCTTACAGATAGCACACAACAGTA
AGGTGAATAAAATTATAATTCATTTTTTTTCTAGATTACGGCAAACTACC
CTCACTAACTTTCATCGGGTACGCACGAAAATACGGCGGTCATTCTCCAC
ACGGGAAGTTGCCGTATCCTACTTCGACACCGGGTAGCAACAATAACGGA
AACAACCCTTCAAGTAACGGATTCCGCCGACGACACCGGACCATCTTTTC
TGACGAACAATTGGAGTTGATGGAGAGAATGTTCGATCGGACACATTATC
CAGATGTGATGGTGAGAGAAGAAATCGCAAGAATGATCAACTTGACCGAA
GAAAAAGTTGAGGTAAGAACCTAACACTCTCTTGCGAAAAAAATTACGTC
TATCCATGCCTGAAACGAACTCAATAGAAAATAATCTTACAAATTCAAAA
AAAGTTAACAAAGTGCTAGTCTGTAGACGAAAACAGTTTCATATTATGGC
TCAGCTAAAATGTCTTTAAAAAGTTAGCTGTTTGGAAGGCACTGGCTAAC
GAAGTCCTTATTCTTTCCATAGGAATATTTCGCTTTTGCGCAAATTTATC
ATATTAACGAAAAAGGATGATCTGAGTAAAGCGCAAACGCAAAAACCTTG
ATCGATCTATTCCGCTTATTAGTCTCAACATGTGCTTGTCATAAATCAAA
TAATTAGAAAAGTAAAAGAGATCTATCAAGCGCAAATTTGAAAGAGGATC
AACCCATAAAACAGTGTCGGAATTTTGAGAGGCTTTTAATTTCATAAACA
GGGAAAGCTTGAAGAATTATCCCTTCTTTTAAAAATGCTCTTATTATCAC
CATCTTGTTGTTTTAGCTTAATCAACATAACCCGACAAAACAAACTAACA
CTTCCCGCAAAACCCTTCTTCTTTTGAGGACCAAAATGGGACCAAAAGCC
AAAAAATAATTGAAGGCATTTCGTATGAAAAGAAATCTTTTCAAAAGAAG
CTCGTGCCGTAAATTATCAAAAGAATCAAAAAGCTAAAATTGAAAAGGTT
ACAATTATCAAAAAGAATAAAAGAAGGGGAAAGTTTGGGGCTTAAGACCT
TATTTTTCTTTTGAGCTTTCCCAATGCTAATCTAATCAAGAGTATTCAAC
ACTCGAGAAAAAAGGGTGATTCTCAAAAGTCGGGTAATTTTTCTATTGAG
GCAAAATTCAATAGATAAAAAGATCTAAAAGGTTAAATACTTAAAAGCTT
ATACAACAAAAAATAAATAGAATGAACCTGAATAAAAAATTGGGTCCAGT
TTTTTATCCTGAAATGGGGCGGTGCAGGGAAAAAAAAGAGTTAAAACGAA
ACCGCACTTATGCCATATCATTCTACAAAAATGAAATTCAAATACATAAC
GGACATCAAAGCCCTGAACGTTACACTCCTAATGCAAAATCATTTATTAG
TTTTTCCCAAAATAGCACTGCTCATGCTAAAAGGTTCATCACTGTGTGGT
ATAATCAAGGCCTTAACTTACACAGATTCAATAAATATAGGCTATTCTTC
TTTGACTTCACAGGTTTGGTTCAAAAATCGTAGAGCAAGATGGAGAAAAC
AAAAGAAAGACACGCACAATTCATCACCGAAAGGACTTCGAGGAGGGATT
AGCTCTGCGTTAAACCACGGAAAGTTGACGATGAATAGTAGCTACGTCAT
TGATAGTGAAGGTTCAATATCTCCCTGTTCACCCATACGAGAAATTGAAA
AGGCCTTAAGTAAGACTCCTCATTGATTGACAAGCGAAGAGAAGCTTTGA
GGATGCGGAGATTTTGAGGAGGAAGAATGGTGATCGGCGACAGGACAGGT
CAGACCAATTATGACTTTCTTCCGGTTGAATAATGGGACCAACGTCTTTG
CTGGATTCGCCTGGTACGAAAGACGAAAGGCGAAAACCAAAAGCCGAGAA
GGCGGCTCTTAACGATCACACTCATTTGCAAACAGCCGTGCAAAATGGTG
GGCTGAAAAACCCATACGGGGAGGATGTTCAAAAATCTTTTGAAAACAGG
GAATATTCGGAAGCAAATTAATGAGAAGATTCCAGCAGTGACAACAAGAA
GAATCCTAAAAGGACACAGACAAGTCAAAATCAAATTTGAGTGGGGATTA
ATCTATTTTTTTTAAATGGTGTATTCTTTCAATGATAAGAATTATAATTT
CTCATTATTTTAAACTAGACAAAAAGTCTCCCTCGTCGATTAGACCCATG
TTGAGTTATATTTTGGAAATTCTCTTCTCTATTATGTGTTCTTGGAGTAG
GAAGCTTTTGCAAAAGTAAGCTCCAAAGTTATCTTGGAAAAG Coding sequence (CDS) from alignment at sc0000114_pilon:295552..298693- >MSTRG.13949.1.p1 ID=MSTRG.13949.1.p1|Name=MSTRG.13949.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2700bp|location=Sequence derived from alignment at sc0000114_pilon:295552..298693- (Clytia hemisphaerica_ch_hm2_pilon)
GTTTGGTTCAAAAATCGTAGAGCAAGATGGAGAAAACAAAAGAAAGACAC
GCACAATTCATCACCGAAAGGACTTCGAGGAGGGATTAGCTCTGCGTTAA
ACCACGGAAAGTTGACGATGAATAGTAGCTACGTCATTGATAGTGAAGGT
TCAATATCTCCCTGTTCACCCATACGAGAAATTGAAAAGGCCTTAAGTAA
GACTCCTCATTGAATTACGGCAAACTACCCTCACTAACTTTCATCGGGTA
CGCACGAAAATACGGCGGTCATTCTCCACACGGGAAGTTGCCGTATCCTA
CTTCGACACCGGGTAGCAACAATAACGGAAACAACCCTTCAAGTAACGGA
TTCCGCCGACGACACCGGACCATCTTTTCTGACGAACAATTGGAGTTGAT
GGAGAGAATGTTCGATCGGACACATTATCCAGATGTGATGGTGAGAGAAG
AAATCGCAAGAATGATCAACTTGACCGAAGAAAAAGTTGAGATGAGTGGA
TTTTTGATCGAGAATTTACTGAAAGACGATGGAAGGAGGTTTCAGGAGAA
AACGGATTACACATTGCGTGAAGGTTCAGAATCAATAGACGAACACAGAC
ACAGTCCACCGTTTGACTTGACGCCGTCACCCGTACGCGAAACGCCGTGC
AAATCACGACACGTTTACCAAGAAGAAGATTTCGTGCATCTTTTACATCA
ACATCATCGTAACGACCATGTGTCCATACGGGGCGCCAAAATGTCCAATA
TCTGTGAAAAGGACCTTTCATGCAAATGTGAGATTTGTGTGTGCATGTTG
TGTTATGAATGGCATTCGACCTGGAAAAGATCCAACCTTTCACGATTTCA
AAAACATTCATTGAGCATCAAAAATATCCACCCAAAGCATTGCTCTAGAG
GTTTGGTTCAAAAATCGTAGAGCAAGATGGAGAAAACAAAAGAAAGACAC
GCACAATTCATCACCGAAAGGACTTCGAGGAGGGATTAGCTCTGCGTTAA
ACCACGGAAAGTTGACGATGAATAGTAGCTACGTCATTGATAGTGAAGGT
TCAATATCTCCCTGTTCACCCATACGAGAAATTGAAAAGGCCTTAAGTAA
GACTCCTCATTGAATTACGGCAAACTACCCTCACTAACTTTCATCGGGTA
CGCACGAAAATACGGCGGTCATTCTCCACACGGGAAGTTGCCGTATCCTA
CTTCGACACCGGGTAGCAACAATAACGGAAACAACCCTTCAAGTAACGGA
TTCCGCCGACGACACCGGACCATCTTTTCTGACGAACAATTGGAGTTGAT
GGAGAGAATGTTCGATCGGACACATTATCCAGATGTGATGGTGAGAGAAG
AAATCGCAAGAATGATCAACTTGACCGAAGAAAAAGTTGAGATGAGTGGA
TTTTTGATCGAGAATTTACTGAAAGACGATGGAAGGAGGTTTCAGGAGAA
AACGGATTACACATTGCGTGAAGGTTCAGAATCAATAGACGAACACAGAC
ACAGTCCACCGTTTGACTTGACGCCGTCACCCGTACGCGAAACGCCGTGC
AAATCACGACACGTTTACCAAGAAGAAGATTTCGTGCATCTTTTACATCA
ACATCATCGTAACGACCATGTGTCCATACGGGGCGCCAAAATGTCCAATA
TCTGTGAAAAGGACCTTTCATGCAAATGTGAGATTTGTGTGTGCATGTTG
TGTTATGAATGGCATTCGACCTGGAAAAGATCCAACCTTTCACGATTTCA
AAAACATTCATTGAGCATCAAAAATATCCACCCAAAGCATTGCTCTAGAG
GTTTGGTTCAAAAATCGTAGAGCAAGATGGAGAAAACAAAAGAAAGACAC
GCACAATTCATCACCGAAAGGACTTCGAGGAGGGATTAGCTCTGCGTTAA
ACCACGGAAAGTTGACGATGAATAGTAGCTACGTCATTGATAGTGAAGGT
TCAATATCTCCCTGTTCACCCATACGAGAAATTGAAAAGGCCTTAAGTAA
GACTCCTCATTGAATTACGGCAAACTACCCTCACTAACTTTCATCGGGTA
CGCACGAAAATACGGCGGTCATTCTCCACACGGGAAGTTGCCGTATCCTA
CTTCGACACCGGGTAGCAACAATAACGGAAACAACCCTTCAAGTAACGGA
TTCCGCCGACGACACCGGACCATCTTTTCTGACGAACAATTGGAGTTGAT
GGAGAGAATGTTCGATCGGACACATTATCCAGATGTGATGGTGAGAGAAG
AAATCGCAAGAATGATCAACTTGACCGAAGAAAAAGTTGAGATGAGTGGA
TTTTTGATCGAGAATTTACTGAAAGACGATGGAAGGAGGTTTCAGGAGAA
AACGGATTACACATTGCGTGAAGGTTCAGAATCAATAGACGAACACAGAC
ACAGTCCACCGTTTGACTTGACGCCGTCACCCGTACGCGAAACGCCGTGC
AAATCACGACACGTTTACCAAGAAGAAGATTTCGTGCATCTTTTACATCA
ACATCATCGTAACGACCATGTGTCCATACGGGGCGCCAAAATGTCCAATA
TCTGTGAAAAGGACCTTTCATGCAAATGTGAGATTTGTGTGTGCATGTTG
TGTTATGAATGGCATTCGACCTGGAAAAGATCCAACCTTTCACGATTTCA
AAAACATTCATTGAGCATCAAAAATATCCACCCAAAGCATTGCTCTAGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000114_pilon | genome | sc0000114_pilon:295552..298693 - |
|
