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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000114_pilon:259123..263385- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13946.1.p1 ID=MSTRG.13946.1.p1|Name=MSTRG.13946.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4263bp|location=Sequence derived from alignment at sc0000114_pilon:259123..263385- (Clytia hemisphaerica_ch_hm2_pilon)
GTCATTGTCAAGACGTGCCAGAACTAACTGCATAAATTCTCGCTTTCTTG
TTAGGAGTGTGATGTCGTCCAATAGCTACAAATCTGCTTTTAGGCATGGG
GGATAACATGAATTAGGGCAGTAGATAATATGTAACAATTCCAAAACAAA
AGAATCTTTTTCTGATAGAATTCAGATAAAATATGAACAATAACAATATG
TATGGAGGAGAGAACAATTTGTGGATGTACAATGCATCCGATACATCACC
TCCGTCCAACACCACTTTGCAACCTGCATCAAGTCCATTACCAGATCACT
TAGATATGACTCAATCAATCAAGTATGTATAACATCAGACTTTAATCAAA
CTCCAAGCTTTAAACATCTGACCATATTATTGAATAACGTGAAAGTTTAT
TTCTGTAAAGAAATTATTGTGTTTTTGTTTTTCTGAAATTATCACCCATC
ACTTATATAGTTGACGCTCTCTAATTCGAATCTTTTCTATTCTATTATTC
AATGATGAGTTCCCGTTTTCCTTGCAAATTCACTTTTAAAATCCCTTGAA
TGTTTTTTGCTCTCTAATTTTGATTTCTAACGGGTAAGTAGACCTTTATG
ACGGAGTTTTCTATACATCAAATTTTGATTTTTTTGCTGTTAAATGAAAG
TTTTGGAATTCTATCCCTCAAATAAAAAAATTAGTTCACCTTTATTAAGT
TTTCCTTCTATAATTCGATAATTCCCCTGGAAAATCGTTATCTGTACTTT
TATGTGAATGATTCTAACAATTAAATTTCTTAGGCCAATCAATCTTACCT
TAAAGGAAGAAATTTTGGCGGAAAGAAAATTTGGCGGATTTGGAGGATTT
GACTGAAATCTGCCAAATTAAGTTCCCGCCAAAACTTCTTTTTTTCGCCA
TCCGCCAAATTAAATTCCCGCCAAATTAAACATTTTGAAAATATGATCTC
TTTTAAGGTGTTTTTGCTATTTTTTCGCTGTTTTGACGCCATCTTAAGGT
TAAATTTTTAAGCGACCGCCAAATTAAATTCCCGCCAAATTTAGTTTTTT
CGTCCATCCGCCAAATTAAATTCCCTCTGAAAAAACTTTTTTGGCCATCC
GCCAAATTAAATTCCCGCCAAAATTTCTTCCTTTAAGGTACTTGATTGAC
CTAAGAAATTTAATTGTTAGAATCATTCCTTTCTATATTTTCTTGCCTCT
TTACTTAAAACACCTGTATTTTAGTCAATTTTGATTATGTTCAATAAGTT
ACATATCACCATATTTTTAGCTTTCTACAGAACATGGATTTGATGCAAAG
AGGGATGTTTCCTGGTTCTCTATACAGTAATGGAAATAATGCTGCAGTCA
ACAATATGCAGTTACCGACACTCTCACCACAACCATTACAGCGAAGAGAT
AGTTACAATCGAAATTTGTTTGACTACCCTCCAACTCAACAACATTCTAC
ACAACAACTGCAATCTCAATCCAATCCTCAACAACTCTTTCAAAATCAAT
TACAGGAATCTAATAAACCGTGGGTATTAACCAACCCTTTGCAGCAAATA
AACTCACAAAATTCTTCCCCTATTCAAGGACAAAATGATTTCTCACCTCA
ACGATTAGCTGGCGACTCTTACCGAAACAAAATGACCGATAAGGGGAATA
ATTATAGTCGTGGAGATCCTCCCATGTATCAACATCATGTGCAAGCACAG
AGTCAGGACAATACAATGAAAGGGTTGATGGGAATAGTCAAACAGCCACC
TCCTCCGCCACAATCACCACAAATCGCAAGTAGTCCATCATACCAATTAA
CCGACCCTAATTTGAGTCAGGACGGTAATAAAACGGATATGCATTTACAA
ACTGAAAATAAAACCCTACGGTCGGATCAAAGTAAATCACGTTTCATAAG
GCAGCAACAAATGGCTGAAGATCGGCACAAGAAAAATAACATTAATTCAG
TTTTTTCTGCTGGTATTAAACACAAGACAAATGGCAAAGTATCAAAAGTT
TCAGCCAGTGTTAGAGAAACCAGATATGATAATACAATGAGCGCGCTTAA
GAAAGCAGGACTACTCGACATCACATTACAGACTGGTGAGCTATTGAAAA
AGAATAATAGCCTTCAAAAAGACATTGATATGTTAGAAGAAATAGTAAAA
GTGACCAAACATTTAATGAATAATGAATGAGCAATTTATACCGATCAGAT
TTATCGAAGAAATTAAGGAATTTACTCATGTGGGAAAAAGCTTCTCGGTT
GAAAGTAAGAATGAATGCTATGTAAATATTATGTTCTTTGTTGTTTTCCC
AGTTGAGAAAGTCCCTCAGAATTTCGGCTGGAAAAAAATCTCTGGTCGAA
ACACATCTATCTTTTTGGACCTACCTGGAGGTCCTATAAATTAACCTGTG
TTCGTCCGTCCGTCCGTCCGTCCGTCTGTTACCAACTTTTCTCGGGATTG
AATCATAGGAATCTTTTGATTTTTGGTACAAAGGTGCAAAATGGTAGTGG
CCAAAATGTGATGGAGTCCGATTTTCGAGAAAAAAAAATTTGGGGGCAAT
AAATTGAGGCCAAAAAACGGCTAAAAAACGGGTTTTTTGGACTTGGTGAA
AAATTGGATCATTAATTTTTCTTTTATTTTTTGCATATGAAAGTATTTTG
AAAAAATTTTGTTGGCTCAAAAAACGCATGTTTATCTATAAGAATCACTA
TTAATAAGCATACATCAATGTTCCTAGTCAAATTATTCAATTTTTTTTAT
GAGATACCTTAAAACAGGTTTTTTTCCTTCATCCGCCAAATGAAATTCCC
GCCAAATTTAATTTATTTCACGCATTCCCCAAATTTGTGCTATTTCGAGC
CTTAAAACAGGTTTTTTTGCTTATTTAATAACGCTTTTGGCCAAAAATAT
CCTGCAACCGCCAAATTAAATTCCCGTCAAATTTACTTTATCCAGCTATC
CGCCAAATTAAATTCCCGCCAAAATTTCTTCCTTTAAGGTAGATGTTTTT
TTTTGCTCATGAGGGCTTACTTTTGAAGAATATGTGTGTTTAGACATGAA
ATTTTGTTTGCTTGGTGTGTTTTTATCGAAAAACTGGCCAAATTCAATAT
TTTTTTATAAGCACATTATCAATTACTTAGGTATTAGCTTTTCTCGAGAT
TGGCTCTTTCATTCTTTATGATTTATTGCACAACGATGCATAACTATAAA
CTCTTGAATGTGTAGGAGCCCGATTTTCAAAAAAAATGTTTTTGGGCAAA
TTTGGGCCAAAAAACGGCTAAAAACAGGTTTTTTGCTCACGAAGTCTTGA
ATATGAAAGAATATTTCAAGAGCATGAAATTTTGGTTTGTGAACGTTTTC
TTTATAAGAAACAAACGACTAATTTTAATAGATCGTCACTATTTGTGTTC
TGTTTGATTGTTTAACGGGGGGGGGGGTTGTACTTTTACGGTGTGACGGG
ATTGGCCCTTTTTTAGTACGATATTACGGGATTTGACGAAAAAAGAGACG
GGAAAACGGTATTTTAAAATCAGACGGTGACGGTATTTAGGTACACTTTT
GCCCTGTACAAGCCGGTGTGACGGTGTTATTATTTTTTCAATTTTCGGGA
TTCTGGGATTCAGCAAAAATTTTGACGGGAAAACGGTATTTCGAACCCCT
ACAACCCCTTCGAACCCCTTTAACGGTCATGCTCACGTAGATATCAATTA
TATATGTGTTAAATGCATAACCAGGTAGGTCCATAAAAGTATCACTTGTT
TTTATCTGTTCTAAAGGTCTCTGGTATACGGTATCTACTGGAGAAATATC
AATGAAAGCGAAAATCCGATACAAGGTCGCAGAATCGCAATTTCATGGTA
CCTGTATTACATGTTTTTTTTTCATAAGTAAGTGTCTGCCCCTACATCAG
GCTCGCATTATGCTTAGCATTCTATTGTTCTCAAACAATAGAGCCATTGT
TAAGGTACCAAAAACTGAGCCTGCATATGCTTATAAATGTTATGCTTATA
AAAGAAAAAACATGTAAAGCAATAGTTAGAAAAGGTGGACTACAACCTAA
AAAAACTACTTCTCGATGATTTTTTTACAAGTTCGCTATGAATTAATCTG
TCATAAATTGTTAAAAGATTGTAAAATTATGCTGTTGACAATTTCATCGA
TCATGTCGTGTAACGCGGTGCATTTTAATTAAGAAAACGTCTTTTTTGTT
CCTCGTTAATATTTCATGCAAGAATTTGTCAAAATTTTCTAAAAAATTTC
CTGATCTGTCCTG Coding sequence (CDS) from alignment at sc0000114_pilon:259123..263385- >MSTRG.13946.1.p1 ID=MSTRG.13946.1.p1|Name=MSTRG.13946.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2100bp|location=Sequence derived from alignment at sc0000114_pilon:259123..263385- (Clytia hemisphaerica_ch_hm2_pilon)
CTTTCTACAGAACATGGATTTGATGCAAAGAGGGATGTTTCCTGGTTCTC
TATACAGTAATGGAAATAATGCTGCAGTCAACAATATGCAGTTACCGACA
CTCTCACCACAACCATTACAGCGAAGAGATAGTTACAATCGAAATTTGTT
TGACTACCCTCCAACTCAACAACATTCTACACAACAACTGCAATCTCAAT
CCAATCCTCAACAACTCTTTCAAAATCAATTACAGGAATCTAATAAACCG
TGGGTATTAACCAACCCTTTGCAGCAAATAAACTCACAAAATTCTTCCCC
TATTCAAGGACAAAATGATTTCTCACCTCAACGATTAGCTGGCGACTCTT
ACCGAAACAAAATGACCGATAAGGGGAATAATTATAGTCGTGGAGATCCT
CCCATGTATCAACATCATGTGCAAGCACAGAGTCAGGACAATACAATGAA
AGGGTTGATGGGAATAGTCAAACAGCCACCTCCTCCGCCACAATCACCAC
AAATCGCAAGTAGTCCATCATACCAATTAACCGACCCTAATTTGAGTCAG
GACGGTAATAAAACGGATATGCATTTACAAACTGAAAATAAAACCCTACG
GTCGGATCAAAGTAAATCACGTTTCATAAGGCAGCAACAAATGGCTGAAG
ATCGGCACAAGAAAAATAACATTAATTCAGTTTTTTCTGCTGGTATTAAA
CACAAGACAAATGGCAAAGTATCAAAAGTTTCAGCCAGTGTTAGAGAAAC
CAGATATGATAATACAATGAGCGCGCTTAAGAAAGCAGGACTACTCGACA
TCACATTACAGACTGGTGAGCTATTGAAAAAGAATAATAGCCTTCAAAAA
GACATTGATATGTTAGAAGAAATAGTAAAAGTGACCAAACATTTAATGAA
TAATGAATGAATGAACAATAACAATATGTATGGAGGAGAGAACAATTTGT
GGATGTACAATGCATCCGATACATCACCTCCGTCCAACACCACTTTGCAA
CCTGCATCAAGTCCATTACCAGATCACTTAGATATGACTCAATCAATCAA
CTTTCTACAGAACATGGATTTGATGCAAAGAGGGATGTTTCCTGGTTCTC
TATACAGTAATGGAAATAATGCTGCAGTCAACAATATGCAGTTACCGACA
CTCTCACCACAACCATTACAGCGAAGAGATAGTTACAATCGAAATTTGTT
TGACTACCCTCCAACTCAACAACATTCTACACAACAACTGCAATCTCAAT
CCAATCCTCAACAACTCTTTCAAAATCAATTACAGGAATCTAATAAACCG
TGGGTATTAACCAACCCTTTGCAGCAAATAAACTCACAAAATTCTTCCCC
TATTCAAGGACAAAATGATTTCTCACCTCAACGATTAGCTGGCGACTCTT
ACCGAAACAAAATGACCGATAAGGGGAATAATTATAGTCGTGGAGATCCT
CCCATGTATCAACATCATGTGCAAGCACAGAGTCAGGACAATACAATGAA
AGGGTTGATGGGAATAGTCAAACAGCCACCTCCTCCGCCACAATCACCAC
AAATCGCAAGTAGTCCATCATACCAATTAACCGACCCTAATTTGAGTCAG
GACGGTAATAAAACGGATATGCATTTACAAACTGAAAATAAAACCCTACG
GTCGGATCAAAGTAAATCACGTTTCATAAGGCAGCAACAAATGGCTGAAG
ATCGGCACAAGAAAAATAACATTAATTCAGTTTTTTCTGCTGGTATTAAA
CACAAGACAAATGGCAAAGTATCAAAAGTTTCAGCCAGTGTTAGAGAAAC
CAGATATGATAATACAATGAGCGCGCTTAAGAAAGCAGGACTACTCGACA
TCACATTACAGACTGGTGAGCTATTGAAAAAGAATAATAGCCTTCAAAAA
GACATTGATATGTTAGAAGAAATAGTAAAAGTGACCAAACATTTAATGAA
TAATGAATGAATGAACAATAACAATATGTATGGAGGAGAGAACAATTTGT
GGATGTACAATGCATCCGATACATCACCTCCGTCCAACACCACTTTGCAA
CCTGCATCAAGTCCATTACCAGATCACTTAGATATGACTCAATCAATCAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000114_pilon | genome | sc0000114_pilon:259123..263385 - |
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