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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000114_pilon:208640..212458- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13944.1.p1 ID=MSTRG.13944.1.p1|Name=MSTRG.13944.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3819bp|location=Sequence derived from alignment at sc0000114_pilon:208640..212458- (Clytia hemisphaerica_ch_hm2_pilon)
GTTTTAGGAGGTATACAAGAGTAATCAAACCAATCTATAGGCTGACACAA
TTCAAACAAAATTGACAAAGGATGTCATCAAGAGGGGTTTGAATGTTTGT
ACAATGTTGGAAAACAAATCGATCAACCAATGTTTTGAAATGACTCATAA
AAATTGATTTTTGATTTGATCTGATTATTGTGTGGAAAGAAATCGACGAG
AGACAACTTCACTATTGTTTGCATAGCGTCAAACCTCGGACAGTCAAAAA
GACTAACAGAACTCAATGCGATAAATTTTACGAAATGAACTCGACAGAGA
CTTCAACCGAAAGCATTATGAATGATCAAACAATGACAGCCATAAAGGCT
GGACTTTACAGCTTCATTTTTATCCTTGGTGTATTTGGTAATATTCTCGT
TGTCAAGGCGACAAAACAATATCTGACGCTTCAAGGAGCGACAAACATTT
TGATATGCAATTTATGTGTTTGTGACATTTTCATGTTGGTTCTTGGTATT
CCAGTCTTCGTGATAGGCGAGCATAGGCTGATAGACTCGTTTGGAACCTC
AACCTGCAAAGTTATCAACCCGTTTGTGATTGCAGGCTTAACTATTACCG
TATCTAGCCTGGTGGCCATTGCAGTAGAAAGGTGTAACGTTATTGTGAAT
TCACGTCGATTCAAGTTACTGTTAACAGCAGAAAAGACATACTTCATCAT
TGCCGTGATCGATATTTTAGCCATCGTGAGTGCAGCACCATTATCCGTTA
TCGAATACAAACAAGACAATTCACATTGTGTTCGTGCTTGGGATCGCCCG
AAAAACATCGCTTATGCTTCACTCGTATTTCTTTTCCAATACGCCATTCC
GTTGCTCGTTATGGTCATCCTATACTCCATTTGTTGGTACAGAATACGAA
AAAAGAACAAAACAACTATCAAACTCGCTAAGAATAATCGAAAACAGTCT
ACCAATCTGATCAAAGAGCGAAGTCATTCTGATGGTGATCTTGTAAGTTT
AACAGATGACAATCCAATCAGAATTCGACCTGTTTCATCAGAATTCTTGT
CCAATGAGATTCATGACTTTTTGAGCGGAAGTTCAAATCATTTGAGTGGT
ATTGTTAAGCGACAATCTTTTCATCGTACATCTATGAGACGCTCTTTTTC
GCTCGATTCAATCTGCGATCCGGAGACAGCAGAAGCTGCAAAAAAACGAC
ATTCGACTTGTCGGAAATCTATAACGTTAGACGCAAAATTATCGTCGTAT
GGCAGTGAGGATTGTGAAAAGGAAGATTCGAACGCTTTGAGACCACAAGA
AACGAATCTTTCGAAAAGAAAATCTTTCGTTGGTTCAATGCAGCGTTTAC
ACAGCAGTTTTCAAAATCTGGTGACAGGAACGGACGGTAAAGATGCGTTG
ACAGTATTTGCTTTGAAACGTGTCAAACAAACATTAAAGACATTACGTAT
GTTTTCATTCCTGGTCACTGCGTTTGCAGTGTGTTTGTTACCGCATCATA
TTGTGTCTTTCATGTTCGAAGACGTCTCAGAGACTATACGTTTCTTCGAA
ATATTGATCTATATAAACGCTGCCGTTAATCCGTGGATCTACGCCGGAAT
GAATAAATCATACCGTGTAGCATTCGAAAGCTTTTTCCGACGCAAAGAAC
ATCCGTTGAAGCGACGTAGACGTTTAAACAACCGGCGTCGTAAAATTTCA
TTGGGCAGCATGAAAGCACAAACAGACTCTAGTAAACTATGTTGGAATAA
ATTCATAGACTGTTTATGTTACAAAGTTTCACGAAATCGTGGCAAATACG
AAATAGGACATGACCCAGATGAAGAAGCCACGGAAGCATTGCGCGCGGAA
GAACGTAGCGAAAGACGTGATACGTTTAATGGTGAACTTTCTTCACGTAC
CAGTAGCACGGGAAAACGATTAGGGTCCACAAGTACACGTAAAGACAGTA
CAATGAGCGTGCGTAAAGATAGTAGAACGTCACGTAAAGGAACTATGACG
TCAGAAGATGGACATATTCCGATCCTTGCACCCATTATTATTATAACTAA
CTATGACGAAGAAATGGAATTACAACAAGCCATTGAGAAAGCAAAGAACA
TAAACACTGTGGCAGAGGCTGCAACCTTAGAGGGCGGGGAGGGCGATGGT
GAAGAAAATCGCTTTTCCGCCATTTATTCTTTTTTTGACGGTGCATGGTA
AATAGTAATATTTTAATTATTAATTTTAAAATAGCATATTTCATATAAAA
GAGGATCACCGTGCAAATACGTTTATCTGAGCAATACTGAATCGGATAGA
CTAAAGAACCGAACCCAACTTTGCTCTCGGTTAATTTTGTATTGTAAATA
AGTTTACAGATATGATAGTTTAATATCACTAGTTTCCATTTTTACATAAT
CATTTTTAAAAGGAATATTTCCAAAGACAAAGTATCTAAGATACATTCAG
TTCAATATATTTCAAAACAGCTAAAAAACACTCTAAAATGCGAAGGACCC
TTCCTGGCAGGTACAATCACTGCTCTTCGCAATCGCACAAACTATTTTAA
ATTACATCGTATATTTAGTAAAACTTCGAAACACTATATGACCCATGGGA
AACTTATGGGTAAAACTTGGCACTAGAATGAAACACTGGTAGGATCGTCG
AAACAGAAATATATAAAAAATCAATAAAGTTCAGTTCCGATAGGGCCAAT
TGTAAAAGATTGTCAAGAAAAATTCACAATATGTGAGTTCCAGGGAGAAC
AAACAATTTTCGAATCACCTCTACAATATTTGTCAATTTTCTGCACTTTC
TTCCTGATCATCTTGTCCCAAGAAAACACTTTTCATAGCTTTTCTGATTC
GTTTCGACCTCAACACCAATATTAATGGATCAAAAATAATTCCAAGCCTC
GCGAAAGCTGGCAAACCTAACCAAAATAGTGTCGATGTTAGCTCCGTTAG
CCCTTTCGCCTCCCTCAAAATAATGATAAATACTGTCACAGGGATATTTG
TCAGAATAAGAACAGTTATGATACGAATGATTAGCTTTTTAGCTGCTCTT
CGCTTTACGAGTCTACGATTTGATGCACGGCTAGTGGCACCTGATTGGTA
AACCCTCCGACGCATGGCGGAAAGCTCTTTACTGATTTGAACATAGAGGG
TGAAGATGATGACGCATGCGCAGACACCGATAACAAGGAACGATTTTTGC
AGATAATTCCATCGGTTGGTGTTGATGATAAACATGACAGTGTGGTATAC
TATGAAAAGTATGGATAGTAAAATGGTGACCGGGATGAAAAAGCGTTTGT
TAAGAGATGATTGGTAGAGAAAAGGTTTGACCACAGCAAAGTACAGTTGC
AATATCATCATCAGAACGATCACGATATTAATGTTCAACAGAATAGTTCC
AACAGCATTGAAAATAAGGATTTCGTTACAATTTGCCGTCGTATCAGCAA
ACTCTTCAAAGGTTAAGAGAAAATAGTACGCATCTCTTGATAAGATGAGG
AGAGAACGAATCGTGTTGCACACAACGAGAAAGGTCTGCAAAATTTCGTT
GATTTTCTTGTTCAGCATTTTAACAAAGATAGCTCGGAGAATGAGAATGT
TGAAGACAAACCCTAATAAGGCGATAGCGAATATAGTGATGCATATGAAT
CGGATAGGTGTTTGAGTGATACCGTTGTACACTATGTAGTGAGCATCTTC
GTTGCAAGTCACGTTTCTGCTGAACAAAATCATCGCATCAACCTGTTCAC
AATTTGAAACAACAAGGTTGAAGTCTTCTTTTTCTTTCCTTTTCCTATCT
CCTTCCCTCTTGACTCGAC Coding sequence (CDS) from alignment at sc0000114_pilon:208640..212458- >MSTRG.13944.1.p1 ID=MSTRG.13944.1.p1|Name=MSTRG.13944.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1917bp|location=Sequence derived from alignment at sc0000114_pilon:208640..212458- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACTCGACAGAGACTTCAACCGAAAGCATTATGAATGATCAAACAAT
GACAGCCATAAAGGCTGGACTTTACAGCTTCATTTTTATCCTTGGTGTAT
TTGGTAATATTCTCGTTGTCAAGGCGACAAAACAATATCTGACGCTTCAA
GGAGCGACAAACATTTTGATATGCAATTTATGTGTTTGTGACATTTTCAT
GTTGGTTCTTGGTATTCCAGTCTTCGTGATAGGCGAGCATAGGCTGATAG
ACTCGTTTGGAACCTCAACCTGCAAAGTTATCAACCCGTTTGTGATTGCA
GGCTTAACTATTACCGTATCTAGCCTGGTGGCCATTGCAGTAGAAAGGTG
TAACGTTATTGTGAATTCACGTCGATTCAAGTTACTGTTAACAGCAGAAA
AGACATACTTCATCATTGCCGTGATCGATATTTTAGCCATCGTGAGTGCA
GCACCATTATCCGTTATCGAATACAAACAAGACAATTCACATTGTGTTCG
TGCTTGGGATCGCCCGAAAAACATCGCTTATGCTTCACTCGTATTTCTTT
TCCAATACGCCATTCCGTTGCTCGTTATGGTCATCCTATACTCCATTTGT
TGGTACAGAATACGAAAAAAGAACAAAACAACTATCAAACTCGCTAAGAA
TAATCGAAAACAGTCTACCAATCTGATCAAAGAGCGAAGTCATTCTGATG
GTGATCTTGTAAGTTTAACAGATGACAATCCAATCAGAATTCGACCTGTT
TCATCAGAATTCTTGTCCAATGAGATTCATGACTTTTTGAGCGGAAGTTC
AAATCATTTGAGTGGTATTGTTAAGCGACAATCTTTTCATCGTACATCTA
TGAGACGCTCTTTTTCGCTCGATTCAATCTGCGATCCGGAGACAGCAGAA
GCTGCAAAAAAACGACATTCGACTTGTCGGAAATCTATAACGTTAGACGC
AAAATTATCGTCGTATGGCAGTGAGGATTGTGAAAAGGAAGATTCGAACG
CTTTGAGACCACAAGAAACGAATCTTTCGAAAAGAAAATCTTTCGTTGGT
TCAATGCAGCGTTTACACAGCAGTTTTCAAAATCTGGTGACAGGAACGGA
CGGTAAAGATGCGTTGACAGTATTTGCTTTGAAACGTGTCAAACAAACAT
TAAAGACATTACGTATGTTTTCATTCCTGGTCACTGCGTTTGCAGTGTGT
TTGTTACCGCATCATATTGTGTCTTTCATGTTCGAAGACGTCTCAGAGAC
TATACGTTTCTTCGAAATATTGATCTATATAAACGCTGCCGTTAATCCGT
GGATCTACGCCGGAATGAATAAATCATACCGTGTAGCATTCGAAAGCTTT
TTCCGACGCAAAGAACATCCGTTGAAGCGACGTAGACGTTTAAACAACCG
GCGTCGTAAAATTTCATTGGGCAGCATGAAAGCACAAACAGACTCTAGTA
AACTATGTTGGAATAAATTCATAGACTGTTTATGTTACAAAGTTTCACGA
AATCGTGGCAAATACGAAATAGGACATGACCCAGATGAAGAAGCCACGGA
AGCATTGCGCGCGGAAGAACGTAGCGAAAGACGTGATACGTTTAATGGTG
AACTTTCTTCACGTACCAGTAGCACGGGAAAACGATTAGGGTCCACAAGT
ACACGTAAAGACAGTACAATGAGCGTGCGTAAAGATAGTAGAACGTCACG
TAAAGGAACTATGACGTCAGAAGATGGACATATTCCGATCCTTGCACCCA
TTATTATTATAACTAACTATGACGAAGAAATGGAATTACAACAAGCCATT
GAGAAAGCAAAGAACATAAACACTGTGGCAGAGGCTGCAACCTTAGAGGG
CGGGGAGGGCGATGGTGAAGAAAATCGCTTTTCCGCCATTTATTCTTTTT
TTGACGGTGCATGGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000114_pilon | genome | sc0000114_pilon:208640..212458 - |
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