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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000114_pilon:194630..197113- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13943.1.p1 ID=MSTRG.13943.1.p1|Name=MSTRG.13943.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2484bp|location=Sequence derived from alignment at sc0000114_pilon:194630..197113- (Clytia hemisphaerica_ch_hm2_pilon)
TATATGTAAGCTTTGAGAGAGAAAATGTTCTGCTAGTCATCTTTCGGAGA
GACGGACAGGCAGACGTAGCTAGAAAATTAAATTATTTCTAAAAAATAGA
CAAAATACATTACTATGTCTTTCAACAGCAAAAAAACTGACGTGTTTTTA
TCCCACAATTGGGGAAAGGATGGTAAAAATCATCAAAAAGTGGCGAAAAT
CAATCGAGCACTCGAAGAGCTTGGATATGTCACTTGGTTCGATGACAAAG
AGATGTACGGAGATATTAGAGCCCGAATGGCTGATTGGAATCAAAAATAC
AAATTGCTGTCTTGCATTTTTGACGGAAGAATATCATCAAAAAGTTGTCT
ATGGTCGAGAATCAGATAATTGTAAATCTGAGTTTGATTTTGCCAGTACG
ACAGTTCCAATTCGAGCTGTGGTTCTTGAGGACAGTATGAAAAACCCTCA
TACGTGGGAAGGGAACATTGCAATCACTTTGAAGATCAAATTGTATGTGG
ATATGTCAGAGGATGTCGACGATCGAGAATACTTTGAGGAGAAAATGCAG
CAGTTGAAAAAAGAATTGGATAAGATAATTTCGCCAAGTGTAGAATCAGA
TACTAAGCAAACTGTGATTCAAGGTATCTGAAATATTTTCTTCTGCTTAG
ATTTTGCATTCATTTAGTGAAGTTAAGTTTATTCCTATCCAAGCCTTTTC
TTTTTAAGAATTTGACTGAACTTTTTGGAGATCGTTTCATTTCAATTTGT
GTATCTCCAGAAAGAAGAGTGTTATAAAAAAGTTATGTTTGTTCGTTTAC
AAAATTCCTCTATTAATCACCTCTCCAAAAGATATTTTTAGTTAAAGAAA
AATGTGTTTCTGATTTTTAGTCGATGAAAACGATGTTCTATCCGAGGGTT
CTGAGACTGAAAAGCTGAAGAATTTAGCGTATCCACTGTTTGACGCTGAA
AAATACGAAGAAGCCATCCCTAATTTGGAGCTCCTGGTAACAAAACAATC
ATCATCTCTCGGACACTCGCATTCGGACACACTAGTCACTCTTCAAAAGT
TGGCTTGCTGTTATAAAGAAACTGAGGAATTTGAAAAAGCTATTTCCACC
TATGAAGATCTGATTGCAAAACAGACCTTGGTTCTCGGAAAGACAAATCA
CGAAACTCTTTCAACTAAATGTGAATTGGCATATTGCTTTCAATACAATG
GAAAGAAAGAAAAAGCTATCAAAATTTGCGAGGAGTTAATTGGGGATCGA
ACATCAATTTTTGGTGTTCTGCACCCAGGCACACTAGAAGCAATACACAG
ATATGCAAGCTGCCTCATAGCCAAAGATCTGGAAAAGGCCACCTCTATTT
TTGAAGAGTTAGTGGAAAATAGAAAGTCCGTGTTAGGGCCCATGGATAAA
GAAACACTTTGTAGTATGCATTCGTACGCAAGCTGTCTCTTTAAGAAGAA
TGAGTTTCAACGGGCAATCTCAATTTGTGAAACTGTTGTTGAAAAAAGAT
TGAAAGTATTGGGGCCAACACACAAGAAGACCATCAGCAGTATGTACCGC
TTATGGCAGTGTTTTGAAAAAAGTAAAAATTTCAACAGAGCTATTGCATG
CCTCAAAACCGTCGTTGAAATGACGAAATCGATAAAAGGTGACCTACACG
AGAAGACTTTGAAATACAGGTTTGAGCTCGGCCGAAACTATTACGAAAAA
CGTGAGAAGACAGCTATTCCCATCTTGAGGGACGTGGTAATAAAGCAATT
ATCACTTCTAGGCGACACTCACAAAGACACAGTAAAAAGCAAGTACTATC
TCGGCAAGAGTTTTTATGACTTTGGAGATTTGGACACTACAATCTTCACT
TTTGAGGACAAACTTGCAAAAGGCAATTTCATGGAAAATTCTAACCATAT
TGACATGTTTGATGTCATGGACATGTTGGCCAGGTCTCACCGTAAAAAAC
TAAATATCGGCAGAGCGAAAGTTCTATTCAAAGAATTGGTAGATAGGCGA
ACAGCGAGTTTAGGGGCTAACCACGAAAAACATTACTCACTCTCTTTTGC
TTGGCCGATTGTTATAGAAAGAACGAAGACTTTAACATTGCCATACCAAT
GTACAGAGATTTAATAAGAAAACAATATCAATCTTTAGGTGCGACACACG
CAAGCACCATCTCAAGTCAAATTAATGTATCATATTGTTTAAAGAGAGCG
AACTGTTATAGAGAAGCACTGTTAATCGATCAAGACGTCGCTGAAAAGAA
AGAAAAGACTTTGGGACCGAATGATCCACAGACTTTGACTTCCAAATACA
GTTTAGCGGTGAGTTACAAAAATAATGGCGAGTTTAACAAATCAAAAGAG
TTGTTGAAGACACTCATTGCATCGCAATCATCGATTCTGGGAAAGCAGCA
CCAAGATACCATTAGAAGTGTTAACCTTTTGAAAACCTTAGTTCACTGAT
TTACTATAAAGTAAAATAATAATTATCACCAAAG Coding sequence (CDS) from alignment at sc0000114_pilon:194630..197113- >MSTRG.13943.1.p1 ID=MSTRG.13943.1.p1|Name=MSTRG.13943.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3396bp|location=Sequence derived from alignment at sc0000114_pilon:194630..197113- (Clytia hemisphaerica_ch_hm2_pilon)
TCGATGAAAACGATGTTCTATCCGAGGGTTCTGAGACTGAAAAGCTGAAG
AATTTAGCGTATCCACTGTTTGACGCTGAAAAATACGAAGAAGCCATCCC
TAATTTGGAGCTCCTGGTAACAAAACAATCATCATCTCTCGGACACTCGC
ATTCGGACACACTAGTCACTCTTCAAAAGTTGGCTTGCTGTTATAAAGAA
ACTGAGGAATTTGAAAAAGCTATTTCCACCTATGAAGATCTGATTGCAAA
ACAGACCTTGGTTCTCGGAAAGACAAATCACGAAACTCTTTCAACTAAAT
GTGAATTGGCATATTGCTTTCAATACAATGGAAAGAAAGAAAAAGCTATC
AAAATTTGCGAGGAGTTAATTGGGGATCGAACATCAATTTTTGGTGTTCT
GCACCCAGGCACACTAGAAGCAATACACAGATATGCAAGCTGCCTCATAG
CCAAAGATCTGGAAAAGGCCACCTCTATTTTTGAAGAGTTAGTGGAAAAT
AGAAAGTCCGTGTTAGGGCCCATGGATAAAGAAACACTTTGTAGTATGCA
TTCGTACGCAAGCTGTCTCTTTAAGAAGAATGAGTTTCAACGGGCAATCT
CAATTTGTGAAACTGTTGTTGAAAAAAGATTGAAAGTATTGGGGCCAACA
CACAAGAAGACCATCAGCAGTATGTACCGCTTATGGCAGTGTTTTGAAAA
AAGTAAAAATTTCAACAGAGCTATTGCATGCCTCAAAACCGTCGTTGAAA
TGACGAAATCGATAAAAGGTGACCTACACGAGAAGACTTTGAAATACAGG
TTTGAGCTCGGCCGAAACTATTACGAAAAACGTGAGAAGACAGCTATTCC
CATCTTGAGGGACGTGGTAATAAAGCAATTATCACTTCTAGGCGACACTC
ACAAAGACACAGTAAAAAGCAAGTACTATCTCGGCAAGAGTTTTTATGAC
TTTGGAGATTTGGACACTACAATCTTCACTTTTGAGGACAAACTTGCAAA
AGGCAATTTCATGGAAAATTCTAACCATATTGACATGTTTGATGTCATGG
ACATGTTGGCCAGGTCTCACCGTAAAAAACTAAATATCGGCAGAGCGAAA
GTTCTATTCAAAGAATTGGTAGATAGGCGAACAGCGAGTTTAGGGGCTAA
CCACGAAAAACATTACTCACTCTCTTTTGCTTGGCCGATTGTTATAGAAA
GAACGAAGACTTTAACATTGCCATACCAATGTACAGAGATTTAAATGGTA
AAAATCATCAAAAAGTGGCGAAAATCAATCGAGCACTCGAAGAGCTTGGA
TATGTCACTTGGTTCGATGACAAAGAGATGTACGGAGATATTAGAGCCCG
AATGGCTGATTGGAATCAAAAATACAAATTGCTGTCTTGCATTTTTGACG
GAAGAATATCATCAAAAAGTTGTCTATGGTCGAGAATCAGATAATTGTAA
ATCTGAGTTTGATTTTGCCAGTACGACAGTTCCAATTCGAGCTGTGGTTC
TTGAGGACAGTATGAAAAACCCTCATACGTGGGAAGGGAACATTGCAATC
ACTTTGAAGATCAAATTGTATGTGGATATGTCAGAGGATGTCGACGATCG
AGAATACTTTGAGGAGAAAATGCAGCAGTTGAAAAAAGAATTGGATAAGA
TAATTTCGCCAAGTGTAGAATCAGATACTAAGCAAACTGTGATTCAAGTC
GATGAAAACGATGTTCTATCCGAGGGTTCTGAGACTGAAAAGCTGAAGAA
TTTAGCGTATCCACTGTTTGACGCTGAAAAATACGAAGAAGCCATCCCTA
ATTTGGAGCTCCTGGTAACAAAACAATCATCATCTCTCGGACACTCGCAT
TCGGACACACTAGTCACTCTTCAAAAGTTGGCTTGCTGTTATAAAGAAAC
TGAGGAATTTGAAAAAGCTATTTCCACCTATGAAGATCTGATTGCAAAAC
AGACCTTGGTTCTCGGAAAGACAAATCACGAAACTCTTTCAACTAAATGT
GAATTGGCATATTGCTTTCAATACAATGGAAAGAAAGAAAAAGCTATCAA
AATTTGCGAGGAGTTAATTGGGGATCGAACATCAATTTTTGGTGTTCTGC
ACCCAGGCACACTAGAAGCAATACACAGATATGCAAGCTGCCTCATAGCC
AAAGATCTGGAAAAGGCCACCTCTATTTTTGAAGAGTTAGTGGAAAATAG
AAAGTCCGTGTTAGGGCCCATGGATAAAGAAACACTTTGTAGTATGCATT
CGTACGCAAGCTGTCTCTTTAAGAAGAATGAGTTTCAACGGGCAATCTCA
ATTTGTGAAACTGTTGTTGAAAAAAGATTGAAAGTATTGGGGCCAACACA
CAAGAAGACCATCAGCAGTATGTACCGCTTATGGCAGTGTTTTGAAAAAA
GTAAAAATTTCAACAGAGCTATTGCATGCCTCAAAACCGTCGTTGAAATG
ACGAAATCGATAAAAGGTGACCTACACGAGAAGACTTTGAAATACAGGTT
TGAGCTCGGCCGAAACTATTACGAAAAACGTGAGAAGACAGCTATTCCCA
TCTTGAGGGACGTGGTAATAAAGCAATTATCACTTCTAGGCGACACTCAC
AAAGACACAGTAAAAAGCAAGTACTATCTCGGCAAGAGTTTTTATGACTT
TGGAGATTTGGACACTACAATCTTCACTTTTGAGGACAAACTTGCAAAAG
GCAATTTCATGGAAAATTCTAACCATATTGACATGTTTGATGTCATGGAC
ATGTTGGCCAGGTCTCACCGTAAAAAACTAAATATCGGCAGAGCGAAAGT
TCTATTCAAAGAATTGGTAGATAGGCGAACAGCGAGTTTAGGGGCTAACC
ACGAAAAACATTACTCACTCTCTTTTGCTTGGCCGATTGTTATAGAAAGA
ACGAAGACTTTAACATTGCCATACCAATGTACAGAGATTTAAATGGTAAA
AATCATCAAAAAGTGGCGAAAATCAATCGAGCACTCGAAGAGCTTGGATA
TGTCACTTGGTTCGATGACAAAGAGATGTACGGAGATATTAGAGCCCGAA
TGGCTGATTGGAATCAAAAATACAAATTGCTGTCTTGCATTTTTGACGGA
AGAATATCATCAAAAAGTTGTCTATGGTCGAGAATCAGATAATTGTAAAT
CTGAGTTTGATTTTGCCAGTACGACAGTTCCAATTCGAGCTGTGGTTCTT
GAGGACAGTATGAAAAACCCTCATACGTGGGAAGGGAACATTGCAATCAC
TTTGAAGATCAAATTGTATGTGGATATGTCAGAGGATGTCGACGATCGAG
AATACTTTGAGGAGAAAATGCAGCAGTTGAAAAAAGAATTGGATAAGATA
ATTTCGCCAAGTGTAGAATCAGATACTAAGCAAACTGTGATTCAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000114_pilon | genome | sc0000114_pilon:194630..197113 - |
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