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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000114_pilon:138679..142885+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13937.2.p2 ID=MSTRG.13937.2.p2|Name=MSTRG.13937.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4207bp|location=Sequence derived from alignment at sc0000114_pilon:138679..142885+ (Clytia hemisphaerica_ch_hm2_pilon)
aaaaaatgttccaataaaaaatataaaacgtaGCCGAGATGAGACATAGC
TAATTTCCCCACCAAGAGGGGACTGTTATCGGCTCCAACCGCAGTAAAAT
AAAACGGTATAACACCCTCCAACGTAGATGTTAAACTTGGCCTAAGTGAA
GCATATGCACAAGGGCAATTCCCTGTTGTACTGTATTTTAATGGCAAATG
GGAATTTCCAATCAAAATCTATACTCAAAATGAGACACGAAACATAATTG
CTGTAGAAGCTTTTCGTCGAAATAGGTTTTACTGTGCATGAGTTTGTGAT
CTTAGTCTTTGTGTGTGTGTCAGAAGaacatattttcaagttttcaaaga
atgatgGCTGCTCGTATCCGGAATGACGCATGGAAAGACGATGAGACTTT
AAAGTTAAAACTTGAAGAATATATTTTACAAGGATTGCAGCGTAAGGAAA
TTATCAGCTATTTGCAAAGGGATTTTGGACAATATTCTTGGACTCCTAGA
ACTTAAAATAGAAGAATGCAGCATTTTGATATCGAGAGAAATGATCCAAA
TGTCTCAATTGAAGAGATTAAAGCAGCTGTAGAAAACGAAATGAAAGGAC
CAGGACAACTGTTAGGTTATAGAGCTCTCCATTTGAAAATACGACAGGAA
tatggattgaaagtaaaacgtGACCTTGTGTATGCTGCAATGGTTGATAT
TGATTACGATTCTGTAAAAAGCCGTCAAccaagaaagaaacaaaagaaac
agaAACAAGAATTCAAATCATGTGGACCCAATTGGTTGTTTTCACTGGAT
GGTCATGATAAACTCATGGGTTACCAGAATGATACCTTCCCCATTGCTAT
CTATGGGTGCATCGATACAGCTAGCAGAAAGATTATGTGGCTCAAAGCCT
GGGAATCTAACAGTAAGCCTGAGTTGATTGGACGGTGGTATTTCGATTAC
CTTTATGAAACAAGAACATTGCCGAACAGAATTAGGTTGGATAAAGGTAC
AGAAACCGGAGTCATGGCTACAATGCATTCTTTTTTGAGAAGTGTACAAG
AAGATATGACTGGTAACGATGAAAATAATGCTTGTGACAAAGTGTTGTTT
GGACCTTCTACGTCTAATAAGGTAAAGTAACTTTTAGGAATTGATCTTGA
TTTCTTGTATATCCCTAGCAAACTTAATGAAAAAGGATTTGATTTTCTTA
AGGTTTAAATTCTAATTTTGCAAATAATTAAAATACAGTAAATGTTCTCA
TATTTCTAGATCGAGCGATGGTGGAAAGAGCTACACGAACGTTTAGAGAT
GTTTTACAAATCAGGTCTTCGAAATCTTGTAGATACTGGGCATTATGATA
GAACTAACGATTTGCATAGGTAtttttttagctattttcaattttcatgt
tttgaagATTTATTTATCATTGTAGTAGAAAAAACATCGTTTCATCATGC
AtgtaataattttaaaataaccccaccctttcactttattttaatATTCA
GTCGATTCATACCTATAGTGGCAAAAATCCCAAAAGTAAAGCCAGATGTT
ATTATAACTAATCATATGTTTGCATGTTTTTAGAAAGATGCTCTCATTCG
TTATGGTGCCTGTTATTCAACGCGAAATAGATATTTTCAAAGATAAAGTA
TGGAATGTTCATCGCGTTCGTTCTCAAAAAGATGTTGCTCTCCCTGCAGG
TGTTCCAAATCACATTTATGATTTCCCAGAAGAGTACAACTTAGAACCTG
ATCGTGGTATGTATATATatttaatacaaaaatttgatgacaatttgaaa
ataacatCCGACACCCACATGAAAtgcttttcaaattatttgaacAATTC
GAAAGcgaagtaaaaaaataaatcctGGATTTCACTATCTGTATTTCCTA
TGTTCTGCGAACTTATGATTATAATTTACAATACAATTTCCTTTACATTA
GGCTTTCAAGTGAATGACGAACAGTTGAGAGAAGTCGCAGATTATTCAGG
GATCCTAGACCATGGAAATGATTTTCTAGACAATGATATGCGTGTACAAT
TTGAGCAGATTATCCCATACCCAGAGAACATAAAAAATCAGGATTgcttt
acaaaatatctttatttgaaaaacaatttgtaaattgtaaaaatgtatGC
TAACTGTATGATTACATAAAAATATGATATATGAAGGATATGTGAAGGAT
ATATGGTTACATGATTTCTAATAAGGAACGTATATGATATGactatataa
aaacatgttaaaatgactaaaatataagcaattataattgattataataa
aaaatcattcacTTCTACTAACTGGTGGCAATGCAAGTTTTTTGCAATAA
ATATTACAAATGTGtgtatcaaaaaaatttctaatcgCCTTCTCTGATAA
ATTGCCTACACAAAAATTGATATTCCCTTCTTCGCCTTGATCTTGAAAGA
ATGACTCTGTGGCTATTTCAGGATCGGTGAGATAATACCCCACCCCCTGA
ATGTCTGTCACGATCAAATTATGGTTCGACTCTTCCCACGTGTAGTGGAC
GAAAGCTTCAGCTTTGCTACAAAGATCAAAGTTGTCACTTTGTGGGTCGA
CTTGTTTAATGGCCCCATTATTATTgatccatttttcaaatttgcctTCA
AGAAATGGCTCAATGGTGCAAACACGACCATCCATTTTTCCAAAGTATAT
CTTGTGGAAGTAAAGGTTGCCTTCAATTTCTGGAAATTTTGCCTTGATCT
TAGTCCGGTATTGTCCACATAAGTTTCTTGCTAGTAGGTGCATTTGCACA
TTTTTTCTTGCATGGTCCTCGTtgctgattttaaaatttttgataaccTC
CTTGGCCCGTTCGTTGTACATCTTGATCACCCACCTTTTTCCAGAAAACA
CTTTCTCTGCACTCTTTGCTGCATATGCAAGGCGGAAACCCCCCTCACCA
AGTGGTTTCTCGTCAATTTGGAAGTTCACACACCCAATACTTGCCCAACT
TTTTTCGCTAACGTCAAACTCCTCTACTTCGATGGTCTcagtttttgatt
tctttttaatcaAAGCCCCAAAGTTCATCATTTCCAATGCAGAAAGGCTT
TTTGGGAATGTTGACTCTACAGGTTGCAATTTCGGCTTTGGTGATTTTGG
TTTCATTGATGGAGCTGGTGGAACTGATGCAACTGaagtgaaaaatgata
aatcCTCATTGTTAGTAGCTGCTGCTTTGCGTTTTCTCACCACGGCAGAA
GGATTAAGAGAAGAAGATGATAACTCGTCATTTAAAAAGCGGACATAAAA
AACGTCAGTTTTTAGCAATTGGTCCATCCGTGTGGCTGACGGTCCTTTAT
CACAGACCAAGACATCGCAGGGTCGATTGTCCTTAAAGTGACGTTTACAA
GCCTCTTTAATATTCTCAATTGAGTATTCGGGATAATCGTACGGAACAAA
TTCTCTTGGGCCCTTTGGTTGGTACTTCATGGTTGTCTGTTTCggctttg
ttttcattttttgcactGTTATCTCCTTCGGGGCTACTAAATTGTTGGCG
TTTTTAGGTTTAGCTGGCTGTCGTCCACCTGAAAAGGAATAGATCTTTTG
GTAGTAGGCTTTCGATCGTTTAAACAATAAACAGATCTTTAGTAAATaaa
ctaaaatattttgcattcaAATTATTTATGTAATTTTAGCTACAACTCAT
AATCAAACTTTtggaaaataaatattgaatacCTGACTGACGTTTCTTCT
TCATTATTAATTCATAATTGTTGTATTTGTCACGATTTGCCATATTTGTA
ATAATTTTAATGATGAAGCCTTATTCTATTCTAAAACGCGTTGTACTTGA
GAACACAGAatcaaagagagaaaaagaaagaaagagaatcttttaaaaat
ctaaCACGCGAATTTTGATTCTGCAAGTTTAACAATTAAACAATCTTAAT
CAGTCTTTTGTTTTTTGCCCTTTCTGTTTACTCTTCGACACGCGCCATCG
ATATAGGGACTTTCCCACTCGTTATGGCTCACCTCGGCCATGATTTTAAG
CTTCCTAGAAGGAGAGTGCTTTTACCTTGTGGATGTAGATAAAAGGTAAT
GACTTGCTCTCCATATTTGAGGATATTTTGTCTTATGTCTCGTCTCGGCT
ACGTGAaggtttttaaatatttttttcacattcgaaaaaaaaaagtcttg
aattttt Coding sequence (CDS) from alignment at sc0000114_pilon:138679..142885+ >MSTRG.13937.2.p2 ID=MSTRG.13937.2.p2|Name=MSTRG.13937.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4284bp|location=Sequence derived from alignment at sc0000114_pilon:138679..142885+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGCATTTTGATATCGAGAGAAATGATCCAAATGTCTCAATTGAAGA
GATTAAAGCAGCTGTAGAAAACGAAATGAAAGGACCAGGACAACTGTTAG
GTTATAGAGCTCTCCATTTGAAAATACGACAGGAAtatggattgaaagta
aaacgtGACCTTGTGTATGCTGCAATGGTTGATATTGATTACGATTCTGT
AAAAAGCCGTCAAccaagaaagaaacaaaagaaacagaAACAAGAATTCA
AATCATGTGGACCCAATTGGTTGTTTTCACTGGATGGTCATGATAAACTC
ATGGGTTACCAGAATGATACCTTCCCCATTGCTATCTATGGGTGCATCGA
TACAGCTAGCAGAAAGATTATGTGGCTCAAAGCCTGGGAATCTAACAGTA
AGCCTGAGTTGATTGGACGGTGGTATTTCGATTACCTTTATGAAACAAGA
ACATTGCCGAACAGAATTAGGTTGGATAAAGGTACAGAAACCGGAGTCAT
GGCTACAATGCATTCTTTTTTGAGAAGTGTACAAGAAGATATGACTGGTA
ACGATGAAAATAATGCTTGTGACAAAGTGTTGTTTGGACCTTCTACGTCT
AATAAGATCGAGCGATGGTGGAAAGAGCTACACGAACGTTTAGAGATGTT
TTACAAATCAGGTCTTCGAAATCTTGTAGATACTGGGCATTATGATAGAA
CTAACGATTTGCATAGAAAGATGCTCTCATTCGTTATGGTGCCTGTTATT
CAACGCGAAATAGATATTTTCAAAGATAAAGTATGGAATGTTCATCGCGT
TCGTTCTCAAAAAGATGTTGCTCTCCCTGCAGGTGTTCCAAATCACATTT
ATGATTTCCCAGAAGAGTACAACTTAGAACCTGATCGTGGCTTTCAAGTG
AATGACGAACAGTTGAGAGAAGTCGCAGATTATTCAGGGATCCTAGACCA
TGGAAATGATTTTCTAGACAATGATATGCGTGTACAATTTGAGCAGATTA
TCCCATACCCAGAGAACATAAAAAATCAGGATTgctttacaaaatatctt
tatttgaaaaacaatttgtaaATGCAGCATTTTGATATCGAGAGAAATGA
TCCAAATGTCTCAATTGAAGAGATTAAAGCAGCTGTAGAAAACGAAATGA
AAGGACCAGGACAACTGTTAGGTTATAGAGCTCTCCATTTGAAAATACGA
CAGGAAtatggattgaaagtaaaacgtGACCTTGTGTATGCTGCAATGGT
TGATATTGATTACGATTCTGTAAAAAGCCGTCAAccaagaaagaaacaaa
agaaacagaAACAAGAATTCAAATCATGTGGACCCAATTGGTTGTTTTCA
CTGGATGGTCATGATAAACTCATGGGTTACCAGAATGATACCTTCCCCAT
TGCTATCTATGGGTGCATCGATACAGCTAGCAGAAAGATTATGTGGCTCA
AAGCCTGGGAATCTAACAGTAAGCCTGAGTTGATTGGACGGTGGTATTTC
GATTACCTTTATGAAACAAGAACATTGCCGAACAGAATTAGGTTGGATAA
AGGTACAGAAACCGGAGTCATGGCTACAATGCATTCTTTTTTGAGAAGTG
TACAAGAAGATATGACTGGTAACGATGAAAATAATGCTTGTGACAAAGTG
TTGTTTGGACCTTCTACGTCTAATAAGATCGAGCGATGGTGGAAAGAGCT
ACACGAACGTTTAGAGATGTTTTACAAATCAGGTCTTCGAAATCTTGTAG
ATACTGGGCATTATGATAGAACTAACGATTTGCATAGAAAGATGCTCTCA
TTCGTTATGGTGCCTGTTATTCAACGCGAAATAGATATTTTCAAAGATAA
AGTATGGAATGTTCATCGCGTTCGTTCTCAAAAAGATGTTGCTCTCCCTG
CAGGTGTTCCAAATCACATTTATGATTTCCCAGAAGAGTACAACTTAGAA
CCTGATCGTGGCTTTCAAGTGAATGACGAACAGTTGAGAGAAGTCGCAGA
TTATTCAGGGATCCTAGACCATGGAAATGATTTTCTAGACAATGATATGC
GTGTACAATTTGAGCAGATTATCCCATACCCAGAGAACATAAAAAATCAG
GATTgctttacaaaatatctttatttgaaaaacaatttgtaaATGCAGCA
TTTTGATATCGAGAGAAATGATCCAAATGTCTCAATTGAAGAGATTAAAG
CAGCTGTAGAAAACGAAATGAAAGGACCAGGACAACTGTTAGGTTATAGA
GCTCTCCATTTGAAAATACGACAGGAAtatggattgaaagtaaaacgtGA
CCTTGTGTATGCTGCAATGGTTGATATTGATTACGATTCTGTAAAAAGCC
GTCAAccaagaaagaaacaaaagaaacagaAACAAGAATTCAAATCATGT
GGACCCAATTGGTTGTTTTCACTGGATGGTCATGATAAACTCATGGGTTA
CCAGAATGATACCTTCCCCATTGCTATCTATGGGTGCATCGATACAGCTA
GCAGAAAGATTATGTGGCTCAAAGCCTGGGAATCTAACAGTAAGCCTGAG
TTGATTGGACGGTGGTATTTCGATTACCTTTATGAAACAAGAACATTGCC
GAACAGAATTAGGTTGGATAAAGGTACAGAAACCGGAGTCATGGCTACAA
TGCATTCTTTTTTGAGAAGTGTACAAGAAGATATGACTGGTAACGATGAA
AATAATGCTTGTGACAAAGTGTTGTTTGGACCTTCTACGTCTAATAAGAT
CGAGCGATGGTGGAAAGAGCTACACGAACGTTTAGAGATGTTTTACAAAT
CAGGTCTTCGAAATCTTGTAGATACTGGGCATTATGATAGAACTAACGAT
TTGCATAGAAAGATGCTCTCATTCGTTATGGTGCCTGTTATTCAACGCGA
AATAGATATTTTCAAAGATAAAGTATGGAATGTTCATCGCGTTCGTTCTC
AAAAAGATGTTGCTCTCCCTGCAGGTGTTCCAAATCACATTTATGATTTC
CCAGAAGAGTACAACTTAGAACCTGATCGTGGCTTTCAAGTGAATGACGA
ACAGTTGAGAGAAGTCGCAGATTATTCAGGGATCCTAGACCATGGAAATG
ATTTTCTAGACAATGATATGCGTGTACAATTTGAGCAGATTATCCCATAC
CCAGAGAACATAAAAAATCAGGATTgctttacaaaatatctttatttgaa
aaacaatttgtaaATGCAGCATTTTGATATCGAGAGAAATGATCCAAATG
TCTCAATTGAAGAGATTAAAGCAGCTGTAGAAAACGAAATGAAAGGACCA
GGACAACTGTTAGGTTATAGAGCTCTCCATTTGAAAATACGACAGGAAta
tggattgaaagtaaaacgtGACCTTGTGTATGCTGCAATGGTTGATATTG
ATTACGATTCTGTAAAAAGCCGTCAAccaagaaagaaacaaaagaaacag
aAACAAGAATTCAAATCATGTGGACCCAATTGGTTGTTTTCACTGGATGG
TCATGATAAACTCATGGGTTACCAGAATGATACCTTCCCCATTGCTATCT
ATGGGTGCATCGATACAGCTAGCAGAAAGATTATGTGGCTCAAAGCCTGG
GAATCTAACAGTAAGCCTGAGTTGATTGGACGGTGGTATTTCGATTACCT
TTATGAAACAAGAACATTGCCGAACAGAATTAGGTTGGATAAAGGTACAG
AAACCGGAGTCATGGCTACAATGCATTCTTTTTTGAGAAGTGTACAAGAA
GATATGACTGGTAACGATGAAAATAATGCTTGTGACAAAGTGTTGTTTGG
ACCTTCTACGTCTAATAAGATCGAGCGATGGTGGAAAGAGCTACACGAAC
GTTTAGAGATGTTTTACAAATCAGGTCTTCGAAATCTTGTAGATACTGGG
CATTATGATAGAACTAACGATTTGCATAGAAAGATGCTCTCATTCGTTAT
GGTGCCTGTTATTCAACGCGAAATAGATATTTTCAAAGATAAAGTATGGA
ATGTTCATCGCGTTCGTTCTCAAAAAGATGTTGCTCTCCCTGCAGGTGTT
CCAAATCACATTTATGATTTCCCAGAAGAGTACAACTTAGAACCTGATCG
TGGCTTTCAAGTGAATGACGAACAGTTGAGAGAAGTCGCAGATTATTCAG
GGATCCTAGACCATGGAAATGATTTTCTAGACAATGATATGCGTGTACAA
TTTGAGCAGATTATCCCATACCCAGAGAACATAAAAAATCAGGATTgctt
tacaaaatatctttatttgaaaaacaatttgtaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000114_pilon | genome | sc0000114_pilon:138679..142885 + |
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