|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000114_pilon:104402..107010+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13933.1.p1 ID=MSTRG.13933.1.p1|Name=MSTRG.13933.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2609bp|location=Sequence derived from alignment at sc0000114_pilon:104402..107010+ (Clytia hemisphaerica_ch_hm2_pilon)
agataCTCTGGCACACAGGTGAGAAGACGTGGGTACGTGATGAGAAAATT
CCAGATCATATTAAGAAACAGGAGAAATATTACGTGGAGAAAGTTGAAGG
AACCATTCTTGGTGCTGAACAGAAGATAGATGTTATCAAACCTATTTCAA
CAAATAGGTATGCTACTTCATTAAAGCATAAAGGAGTGTAGATTACGTCG
GTACTcgtaatttcgcgaattttagatTACCAAGTACTGTAGCTTGTTTC
CTGTTCATTCTAACAAGTGTTAACTCTTTCTAATACTAGCAAAAAGCAAT
CGGAGACATCTAAGCCAAAGAAATGCCATACGGAAAAGACCAAACATAAA
GTCAAGAACaaaaaaaCATCTGgtatatatttgtttttatctatccttat
atttcaatcaaatcatCAGTAAAATGAAATACCGATATCTTTCGGTAGGA
GCCATTTGAATCATCTGATTCTTTTCCCTTCacgatttttttcaaagttt
cctGAAAAATGTTCAGTTTTTTCTTCGAAACAACTATGACGGcgacaatt
tttcaaatttagaataCCGTAAAACCTCGAATTTAGTGCAGCATAAAGAA
TAATAATTATTTTGGTCATGTCGCACTAATAATAAGAGGGATAAAATAGA
ACAGCATGGCTTAAAGGACTCACACTGAATTCGTTATTGCGATtataaag
caaaattttgtggACTGGCAAATAGGGTTACATAAGCATATGGCGGAATA
TTGTTCACTTATAGGATACTGCTAGATCTTCTCATATAGCAACCAAATAT
AAAACGCAGACATCACTCAGGGATCAAGGTCGCTCCACATTTTATATTTC
TCAGTAGTTTATTCCAAAGATTTATGGAGAATGTTTTACTttataatcaa
aaaaattaactcGTAAAAACTGGTCAAAGTTATTATCTTTTAACAGGGTC
CATCATTTCACCTCCTTTTGAGGATATTGAAGcgataaaagttgaaaatt
attttttcaggtgTCCTGGCTTTTACGAGCCCTTGTGGTATCATCGTGAA
CTTAAAAGAGCTATATATTAGCGAATCAAAACTTCAAGTGTTTGGGCATT
TGTTTGAGTTATTGGATTCAGAATTGTTTAAAGACATAGGTAGGTTCATG
AATTGTTACAATGAACAAATGAACTGCTGAAAATCTCGAGCAAATGCACG
TTAGATCATAAAAAATTACGGTTATGTCTACTACTGTACTAGCAAATAAT
AGCAAGTACAGTTCCTTAAAAACCATTAAGAGATAATTCAACTTAGAATT
GTTCGAATTAGAATACTTAGAATCAACGCACCCTGTATTAATACACTTTG
TAATAATAACACATTTTGTAATACCTGACGCACTTTGTATTCCCCCcacc
ttttgaaatttttggagaaaataatTCTATCTTAGTAGAAGTGGGAGAGG
AAACTATGCGATATACATGATGTTCCTTTAAATTTTAGAATGCATTGTAT
ATGATGACGCATGCCATCTCAAAAGATACGCAATGAACAGGAGAAACGTA
TCAGAAAGGCTGGCAGACATGGATTATCGATCTGATAGATTCCATTTCAA
AAATCATGTCGACTTATGGTGTCGTGCAAATTGTAACCCTGATCACAGTG
AAACACTGGATAACGTAGGTTATTTCGTTAAAAATAATAGATTACCAACA
TTTAATCAGTTACAATATTTCGTTAGGCTTTCTATTATACTTTAATATAG
AAAGGGTGTTAAACCATAAAtgaattcaaattattttttaatttaattca
gGTCAATACGGAAGTTTGTGAGCAGCTCTTTTCGTGGTTTTCAAAGTACA
AGGTAATGACAAAACACATGAACAGAGAAAGATACACCTTCATCGTGTTA
TATTTTATGCATATGCATAATGAAAGGGTGTCACTTGAAAATGGTGAAGC
TGATGAATAGATGGCAAATGTTCCTTTTCGATGATGAATATTGACATCTA
TATGGTATTGTGGCAGATGCATCGGTCTGGAAAGGCAACAACAACGGCTT
ATGTGGATGAAAAGACAAAAATTGCGTGGTATTGGTTTTTGCTATatgga
aattatttttactttgagTTAATGATAACACTTCAACACCCCAGCTAGGA
TTCGAACCTAGTTGACTTGACCACAAGCAGGGTTGTGGGTTAATGAAAAT
GTGTAAAGTGTAAAGAATTAAACGTGGACTTTAGGTGAATAGCTAGGGAT
TTAGTTTTGGCAAATGTGATTCTTTTCAAACAAATAAGAGGACTGTATAC
TCAAAAGATGTTTTccgctgcgtttagaccaactggcatttgtaatttgg
catttgttCACAAGAGAATACTTTTAATCACAATTTTCATGTGCTTTCTA
TTGTCTATAATCCGCAGAGATAGACAGGATGTGTCTCCATTTGTGTAATG
TTACTGTCAGAAAGGATTCCCTGATACCTGCGAAAATGTTATGTTAGAAA
AACAGTGTAAAAACAGTCAAATATGTAAATAGCAAAGAGTTAAATCATGT
TGACAAGAGAGAAATTGGCTGCTGTAGCTCTGCTGCAAGCAAATTataca
agagaaaaa Coding sequence (CDS) from alignment at sc0000114_pilon:104402..107010+ >MSTRG.13933.1.p1 ID=MSTRG.13933.1.p1|Name=MSTRG.13933.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3510bp|location=Sequence derived from alignment at sc0000114_pilon:104402..107010+ (Clytia hemisphaerica_ch_hm2_pilon)
ataCTCTGGCACACAGGTGAGAAGACGTGGGTACGTGATGAGAAAATTCC
AGATCATATTAAGAAACAGGAGAAATATTACGTGGAGAAAGTTGAAGGAA
CCATTCTTGGTGCTGAACAGAAGATAGATGTTATCAAACCTATTTCAACA
AATAGCAAAAAGCAATCGGAGACATCTAAGCCAAAGAAATGCCATACGGA
AAAGACCAAACATAAAGTCAAGAACaaaaaaaCATCTGgtgTCCTGGCTT
TTACGAGCCCTTGTGGTATCATCGTGAACTTAAAAGAGCTATATATTAGC
GAATCAAAACTTCAAGTGTTTGGGCATTTGTTTGAGTTATTGGATTCAGA
ATTGTTTAAAGACATAGAATGCATTGTATATGATGACGCATGCCATCTCA
AAAGATACGCAATGAACAGGAGAAACGTATCAGAAAGGCTGGCAGACATG
GATTATCGATCTGATAGATTCCATTTCAAAAATCATGTCGACTTATGGTG
TCGTGCAAATTGTAACCCTGATCACAGTGAAACACTGGATAACGTCAATA
CGGAAGTTTGTGAGCAGCTCTTTTCGTGGTTTTCAAAGTACAAGGTAATG
ACAAAACACATGAACAGAGAAAGATACACCTTCATCGTGTTATATTTTAT
GCATATGCATAATGAAAGGGTGTCACTTGAAAATGGTGAAGCTGATGAAT
AGataCTCTGGCACACAGGTGAGAAGACGTGGGTACGTGATGAGAAAATT
CCAGATCATATTAAGAAACAGGAGAAATATTACGTGGAGAAAGTTGAAGG
AACCATTCTTGGTGCTGAACAGAAGATAGATGTTATCAAACCTATTTCAA
CAAATAGCAAAAAGCAATCGGAGACATCTAAGCCAAAGAAATGCCATACG
GAAAAGACCAAACATAAAGTCAAGAACaaaaaaaCATCTGgtgTCCTGGC
TTTTACGAGCCCTTGTGGTATCATCGTGAACTTAAAAGAGCTATATATTA
GCGAATCAAAACTTCAAGTGTTTGGGCATTTGTTTGAGTTATTGGATTCA
GAATTGTTTAAAGACATAGAATGCATTGTATATGATGACGCATGCCATCT
CAAAAGATACGCAATGAACAGGAGAAACGTATCAGAAAGGCTGGCAGACA
TGGATTATCGATCTGATAGATTCCATTTCAAAAATCATGTCGACTTATGG
TGTCGTGCAAATTGTAACCCTGATCACAGTGAAACACTGGATAACGTCAA
TACGGAAGTTTGTGAGCAGCTCTTTTCGTGGTTTTCAAAGTACAAGGTAA
TGACAAAACACATGAACAGAGAAAGATACACCTTCATCGTGTTATATTTT
ATGCATATGCATAATGAAAGGGTGTCACTTGAAAATGGTGAAGCTGATGA
ATAGataCTCTGGCACACAGGTGAGAAGACGTGGGTACGTGATGAGAAAA
TTCCAGATCATATTAAGAAACAGGAGAAATATTACGTGGAGAAAGTTGAA
GGAACCATTCTTGGTGCTGAACAGAAGATAGATGTTATCAAACCTATTTC
AACAAATAGCAAAAAGCAATCGGAGACATCTAAGCCAAAGAAATGCCATA
CGGAAAAGACCAAACATAAAGTCAAGAACaaaaaaaCATCTGgtgTCCTG
GCTTTTACGAGCCCTTGTGGTATCATCGTGAACTTAAAAGAGCTATATAT
TAGCGAATCAAAACTTCAAGTGTTTGGGCATTTGTTTGAGTTATTGGATT
CAGAATTGTTTAAAGACATAGAATGCATTGTATATGATGACGCATGCCAT
CTCAAAAGATACGCAATGAACAGGAGAAACGTATCAGAAAGGCTGGCAGA
CATGGATTATCGATCTGATAGATTCCATTTCAAAAATCATGTCGACTTAT
GGTGTCGTGCAAATTGTAACCCTGATCACAGTGAAACACTGGATAACGTC
AATACGGAAGTTTGTGAGCAGCTCTTTTCGTGGTTTTCAAAGTACAAGGT
AATGACAAAACACATGAACAGAGAAAGATACACCTTCATCGTGTTATATT
TTATGCATATGCATAATGAAAGGGTGTCACTTGAAAATGGTGAAGCTGAT
GAATAGataCTCTGGCACACAGGTGAGAAGACGTGGGTACGTGATGAGAA
AATTCCAGATCATATTAAGAAACAGGAGAAATATTACGTGGAGAAAGTTG
AAGGAACCATTCTTGGTGCTGAACAGAAGATAGATGTTATCAAACCTATT
TCAACAAATAGCAAAAAGCAATCGGAGACATCTAAGCCAAAGAAATGCCA
TACGGAAAAGACCAAACATAAAGTCAAGAACaaaaaaaCATCTGgtgTCC
TGGCTTTTACGAGCCCTTGTGGTATCATCGTGAACTTAAAAGAGCTATAT
ATTAGCGAATCAAAACTTCAAGTGTTTGGGCATTTGTTTGAGTTATTGGA
TTCAGAATTGTTTAAAGACATAGAATGCATTGTATATGATGACGCATGCC
ATCTCAAAAGATACGCAATGAACAGGAGAAACGTATCAGAAAGGCTGGCA
GACATGGATTATCGATCTGATAGATTCCATTTCAAAAATCATGTCGACTT
ATGGTGTCGTGCAAATTGTAACCCTGATCACAGTGAAACACTGGATAACG
TCAATACGGAAGTTTGTGAGCAGCTCTTTTCGTGGTTTTCAAAGTACAAG
GTAATGACAAAACACATGAACAGAGAAAGATACACCTTCATCGTGTTATA
TTTTATGCATATGCATAATGAAAGGGTGTCACTTGAAAATGGTGAAGCTG
ATGAATAGataCTCTGGCACACAGGTGAGAAGACGTGGGTACGTGATGAG
AAAATTCCAGATCATATTAAGAAACAGGAGAAATATTACGTGGAGAAAGT
TGAAGGAACCATTCTTGGTGCTGAACAGAAGATAGATGTTATCAAACCTA
TTTCAACAAATAGCAAAAAGCAATCGGAGACATCTAAGCCAAAGAAATGC
CATACGGAAAAGACCAAACATAAAGTCAAGAACaaaaaaaCATCTGgtgT
CCTGGCTTTTACGAGCCCTTGTGGTATCATCGTGAACTTAAAAGAGCTAT
ATATTAGCGAATCAAAACTTCAAGTGTTTGGGCATTTGTTTGAGTTATTG
GATTCAGAATTGTTTAAAGACATAGAATGCATTGTATATGATGACGCATG
CCATCTCAAAAGATACGCAATGAACAGGAGAAACGTATCAGAAAGGCTGG
CAGACATGGATTATCGATCTGATAGATTCCATTTCAAAAATCATGTCGAC
TTATGGTGTCGTGCAAATTGTAACCCTGATCACAGTGAAACACTGGATAA
CGTCAATACGGAAGTTTGTGAGCAGCTCTTTTCGTGGTTTTCAAAGTACA
AGGTAATGACAAAACACATGAACAGAGAAAGATACACCTTCATCGTGTTA
TATTTTATGCATATGCATAATGAAAGGGTGTCACTTGAAAATGGTGAAGC
TGATGAATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000114_pilon | genome | sc0000114_pilon:104402..107010 + |
|
