MSTRG.13930.3.p2 (mRNA) -

Overview
NameMSTRG.13930.3.p2
Unique NameMSTRG.13930.3.p2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000114_pilon:13259..16127-

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13930.3.p2 ID=MSTRG.13930.3.p2|Name=MSTRG.13930.3.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2869bp|location=Sequence derived from alignment at sc0000114_pilon:13259..16127- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTGTTGTAGAATACTTCAAGAAAGTCTTCGTTGACACTTGCTGTCTTG GATGCGGCAAAATCAACTACCTTCCACAGAAAACTCATAAAAAGAAAATC GACGATCAATTTATTGGCAAAGAAGCCGATATCGTGGTCCCCGTTCAAAA TTACATCAAAGGCGAATATTATCTTGGGATGAGATATGCTAACATTTTAG AACTCGATGAAATTGAGTATATTGGTGTCTTGGAACCTCCAGACCCTGGA CGCAAGAAAATATCTTACTTAGGAGCTTATTCGAAACATGGCCACTTGTT CTGATGTTAATCTTTATGGCATTTGGGGCTGGCTCATTGGTTTGGGTTTT GGTAAGTTTAGTATTCCTTCCTCTACTTCTCTCTTTGATAACCATACACC GCATATGGCAACGTATTTAAGGCGGTCCCCACTTGCGCGCGCTGCGATCA CACCTTTTGGCTTCAATCCTTTTTGCTTGGAATTACGTCATAAAAATATA GCGCGTGCTCGAAAAAAAAGTTCAACACATTTCAACTTCTTTCAATCGTT ACGTCAGATCTTACCTGTACCAGACGACCACAGCTTTTCCCTCGACAGAG TGATAACAAAATCGCGTGTTGGGATAGAGATAAGTGGACCATGTCAGGTA ATTGCTTCATTTTTCTTTTGAACAAAACCGTCGAAGCTTTGCTCGAAAAA GTGCGATCGCAGCGTGCGCAAGTGGAGACCGGCCTTTATATGACTTTGGA GCAAACGTTGTGTTCTAAAAGACGAGTTTTTAGTGAATAATTTGAAAAAT TTTTGCAGAATTTTGCTGACTCCTGACAGAAGTCGAATGGGGAGAACCTT GTCTCAAATTCTTCTTTTCTGTATGAATAAAAGCGAGGTAGTTGAGACAG GTGAAGGTAGGTGAGACAAGATTTCCTGTAAGATTTATTTATGTTCATAT TTCAGGATAACAGATCGAGTGGAACGCAATTCCCAAGTACATGGATCGGT TTATTCGAAGGAGTTTGGTTTGCTTATGTGTCAATGACGACATTAGGGTG AGAGAACACGCTTCTCTATACTGTGACTATTTCGATATATTTTTTGAAGC AGCGGAATCGTATTATTGCCTAGAGTGACAAATATTTTGTCTACTTGATA TTACTTGAATAACACATATTGAGATTTCTGCATAATTTACACTCTCGTAA ACTGTTAAAATTTACCTTATTTTATAATGCAGGTATGGCGATACAATTCC ACAAGGCTGGACAGCAAGATTATTTTCAGCTGTTTGGATTTTCGTTGGTG TCACCTTCTTTGGAATGTATTTGGGCACAATCACATCTGTTATGACAACA AACCTACAAACGAAAAGTGAATTCAAAATAAATGGACAGCCTGTAAGTAT TTTTCCAGGGAATAACTGTAACACACTATCGACCAACATTTTGTGACCTA TCCCCTTAGAATCCCGGTTTGAAATAGTCAAATTCTTAGCAATCTTAAAT TCATTCAACAAAAACGACTCCCTCAATAAGATGTGTATGGAAGCTTCCAA AGAATTTTCAATAGCTTATCACTTTTTTTCGAATGAGCCATATCCAGCTG AAACCATGAACATATAAACGACTGGAGACCCGCCACGGGACCTCTTCCAA CTGGATAAGCTGGACATAATATCGTCCCATTGGAAAATTATACTCTAATT TATATCCATACTTAAAATAATCAGATTGTGTTATTTTTTCCATCCCCACT GATTTTTTTGCTCAAAAACAATGAAGTTCAAATCCCCAGCCTTAAAAAAC ATGGGGATATCAATCCCCAACGAATTTTGGTCCGTTATTTTTACCCATTA TTTTACATTATTTTACCAACTGGCTGAAAAAATCCTACCGAGTCTTTGAG AAGGGGACGTTTTATGGTCATAATATTCTTTTATAGATTGGTGTTTTATC TTGGACAACCGCGCCTATACAAAATGTCGTACATAATCATGCAATACCTA AAGGTTGGCATTCTAATTATTTTATCGAAAGTCATTCTTGAGAAATCGAA ACCGAACATCATATATATATAGATCATAATTACCCTGAACTCTCTGTAGC TAAAATGTCCGCCATTGTTGTAAGAAATAATGAGGATGCAGATTTTGATA GACATTCTAATACAACTGTCAACCTTCAAAAGCGTGTTTCTTCTCTGAAA ATTTCGGTCCAATACCTTTTGTGGCGTTTAAGGCTGATATAGAATTCGGA TCCGTGTTGTTATTTTTTAGAATATGAAACGGTAGAAGAATTGATAGAAG CTTTCAAAATGGGCAAAATACATGGTAAGAATGTGAAATCTCAGAAGTCT CTCATCACAGACACTATCAACCATGTAAACAAATGTAAAAACAACAAGCA AAGTAAAGTCTTGAAATATTGATGGCTGATTTTTATGTTTTTTAAATACA TTGTTCACTCGAATAAATTTATTCCTATGAAAGATGTCACGAGAACATGA CTGACCCTTACATTAAAATGATAAGATTTGGCTCGAACTAACAGTCATAT AGACGCAACAATAACCCGATGGCCTAAATAACAAGAGACTGTAGTTTGTA TATACACTATATTATTGAATTTTTATTAAAGGAATCGCACTTGACAAATG GATGTCCGAATACTTCTTACCAGAAATCAAGAAAGCTGTTCCGAAAGCTA AGATCCAAAAGCACTCAATACCATTGGATTCTGGTATAGGCTTTATAACA CATTATGAAGATATTTTCAAAATGAAACAATTGTTTCACAGACAAAACGT TGACAATATGAAAAAGCTTTGGTTTGATATTGCGCTCGGATTCAATGGGG TAAGTTACAGAGGAATAAG

Coding sequence (CDS) from alignment at sc0000114_pilon:13259..16127-

>MSTRG.13930.3.p2 ID=MSTRG.13930.3.p2|Name=MSTRG.13930.3.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=303bp|location=Sequence derived from alignment at sc0000114_pilon:13259..16127- (Clytia hemisphaerica_ch_hm2_pilon)
TTTGTTGTAGAATACTTCAAGAAAGTCTTCGTTGACACTTGCTGTCTTGG
ATGCGGCAAAATCAACTACCTTCCACAGAAAACTCATAAAAAGAAAATCG
ACGATCAATTTATTGGCAAAGAAGCCGATATCGTGGTCCCCGTTCAAAAT
TACATCAAAGGCGAATATTATCTTGGGATGAGATATGCTAACATTTTAGA
ACTCGATGAAATTGAGTATATTGGTGTCTTGGAACCTCCAGACCCTGGAC
GCAAGAAAATATCTTACTTAGGAGCTTATTCGAAACATGGCCACTTGTTC
TGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13930MSTRG.13930Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13930.3.p2MSTRG.13930.3.p2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13930.3.p2.exon6MSTRG.13930.3.p2.exon6Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13930.3.p2.exon5MSTRG.13930.3.p2.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13930.3.p2.exon4MSTRG.13930.3.p2.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13930.3.p2.exon3MSTRG.13930.3.p2.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13930.3.p2.exon2MSTRG.13930.3.p2.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13930.3.p2.exon1MSTRG.13930.3.p2.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000114_pilongenomesc0000114_pilon:13259..16127 -