|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000113_pilon:1087214..1090645+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13926.5.p1 ID=MSTRG.13926.5.p1|Name=MSTRG.13926.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3432bp|location=Sequence derived from alignment at sc0000113_pilon:1087214..1090645+ (Clytia hemisphaerica_ch_hm2_pilon)
gatACTTCTCAGCCACTTGATGGGTATTTACAACTAACAATATTTGGATA
CAACCGTCAAGGGTCATCAGAATTCAATAATGACAATGCATCCTATTCTG
GACCAACTTTCATACGAATGCTAAAAGGAAAAGTTTTTGTTGTTGGTCCA
AAAGGAATAACAATAGGAAGTGGTTGGTAAAGTTCTCTGTCAAGAATTTT
TATACTCTCCATTTTTATGGaaggtttttttttgaatagtgctaaatttt
tgatagaaattaCACAAGCTTTCATTAAAATAAGATATACCTGAATTTTA
ATTCTTCAAACACGTAGAAAtataattttgctttttttgttcttttttta
tgttactttatgttttcaaatttataggATCAGAATGTGGCGTTAGAGTA
CCAAAAGAGACAAATTTGCAACCATATCACAGCATCGTTCAATATGATGC
CGCCTCCACTACTGAGGGAAAGGGGGAATTCACTGTTTACAAACTTGAGA
AATCAAGATATCAATTTTCTCAAGACAAAACTAAGATTATTCCCCATACA
AAAAGAATATTGGAAGCAGGAACTGTATTTTCAACTGGAAATATCAAATG
GCTTGTATCAGCAGTTCccattcaaaaacttttattgacCAAAGCATTTG
TGTCAGTTAGGAACCATTCTCTTGCAGATTTCTTAATTCACATGGAAGAA
ATTGATTCTTGGAATAACAAAATGAACAAGATATTAGAGTCAGGTATAAC
AGATGAAGAGAAAGAGCTCTTGACAAAGCAAATTGTTGATTTGAATACTG
AAGAGGATCAGAACTTTGTTATGTGTGTTGATAAATCGAACGAAATATTG
TCAAACATTAGTAATGATAATTTCAACTTCCGTTACACTGAAGCTAATCT
GTATAGTCATTTTTCATTGCTTCATGTTGCTGTTGATTATGGTTGCCAAG
AGATAGTAAAATGTCTGCTGGAAAGAAAAATaTCGGTAAATCTTGTTTGA
ATTTATATGagcaatttatttttattttgtagtttTTCCCTACGCATGCT
GCATTCAAGCACAATCAGTATATAAAGATTTATGTCTATCTTTCAAACCA
ATTTCAATACTCACCTGTTTCAGGATTTTTGACTTTATGTACGCTCTAGT
ACCTAAAAACCATTCCATTGTCTAAATGCAGTTGgtttatagttatattt
ttattcatattctttgtttattttaactcaacatattaaaagtttttaga
ataaaaatgaaattttttatcttaaatAGTGATTCTaatttatccatagg
tgaaccTACAATGTGGACAGTACTCTTTCACTCCTTTACATATTGCGTCT
AAACACGGGAATGAAACAATGGTCAGGTTTCTTATTGAGGTATATACCTT
CATTCATATTGCCTGTAGTAATGTAAAATCAATTCATGTTTTAGCATGTG
TTTCTACCTGTTTCGTACATTGTTAAGTAAGCTTTGTCCTAATCAAGAAG
GTTTTAGGGCCTCCAGAGGTTTGCGTGAATGCCTAAATGCCTGAATGGGC
ATTTTctgttgcgtgaatgcgtgaaaattgaattaaaaaacttgcgtgaa
cgtaaaaatccacttttgaatgcgtgaatctgggctattttgtgtgCGAC
TACGTGaatatttccttttttccaccgattatgtgcagttttcccaattt
tccaaTGTTCTGCCAATTTTTccccgaaaatttttttcgattttctgaaa
aatctggTTATTGGGTGAAACTAGAggaaaaattgcgtgaatgcgtgaat
tgcgaaaaaaattgggtgattgcgtgaattgagggtctgCTGGGGGGCCT
CTTTTATACGATACTGTTTCTTCTTCACCTTCACCTTCACAACATTTTTC
TTCATCATATTTAGCATGGTGCAGAATTAAATATCAAAGATTCATACAAT
GAAACTGCTATCGAAAAgactgaaaattttagaatgagGTATGTAAATTA
TCTTAGCTTAGTAATCCTTACTCCTTAATCCTTACGTTCAGACTCATGAA
ATCTACTAAACCCTTGAAAacgcatcaaattttaaaaccaTTTAAGCTAC
TAATAACTTTTACAGCTTGTTATTTATCCAGGCTGTGTTAGttttagttt
cctttttccttttttcaggcatttttGCTTACTTCTACAAGACTTTTCAA
CTGCATGCGGATTTGGTGATCTGCATAATGTTCAAAGGATATTCAAGGAA
GAACCACTTTGTTTAGATGCTAAAGGATACAGGTAtttttttgcaggttc
tcaacatttgtaaaatgtttttgatggttttttctttttacactcTTATC
ATATGTGAAATATATAATTAAAGATATTATTATGTAGTTTCAACTAAAAC
AAGGTTATAATTTGCTCTGGATTTTTAGATATCTGAGTTCACTTATAGGC
ATTTTACACCATTGCATGTGGCATCATTCAAAGGACATTTTGACATTGTA
AACTTTCTTCTTCAAAAAGGGGTGagtttgcacaaaccccaatgATGCTT
GTAATGAAAACCTAGACAATTTCAAGTAGCCTGAAAGGCAAACCATCATT
CTTTTTGATAATGACAATAATAAAAGTTATATTGACCCTCGATTCACCAA
GATTCATTTTCTGACTCAGTATTAATAATTAACcgtatcaaaatttcaaa
tttcgcTTCATTGCCTATTTTCAATTTGAGAAatgttttctttccttttt
ttaagcTTACCAAATTTATTAATAAATCTTTAAGTagatcattttttttc
aattgtgtATTCTTTCTTTAGGCCAGAGTCAACGAAGTGGATAGCCAGTA
TTGTCGGACAGCTCTACACATCGCAACACTGTATGATCAAGTAGAGGTTA
TTGAAATCCTTGTCACTTATGGTGCAGACCATACCCTAAGTGATGTTTTT
GGTTATCAGGCCATACATTTCTGTCAAAGTCAAAAAGCAGTTGAACTTCT
TACAAAGGTAATGTTTTAACGTCGTGGGGACATTATGCACACATATAATA
TTCAACGAGTTTGTCTATGTCTATGTCAAGTTATTTTAAAGCATAAAACG
ACAATGAAATATAACATAAGATTCATAGGCCTTTAAAACTTACTGTAAAt
tacaaaaatctcaaaacgaATTTCCTCTTCCAGGGTCAAGTATCTTCGCC
TCTGAATATGGCTATCCAGATAGGAGACCATGAACTTGCTATAAAAATTA
TCGAAGAATACCAACGAGAAATAATTCCCGATGGAAACACCAGGAATACA
ATACCTTCAAATGCTAGAAGGGTCAGTCGTCAAATTGCAATGTCAAATCT
AGGATTAGCTTCCATTATTGATCAGAAGAATGAACGAGGAATGAGTCCGA
TGCATATAGCTGCAGCTTCAGGCAAAAAGTAT Coding sequence (CDS) from alignment at sc0000113_pilon:1087214..1090645+ >MSTRG.13926.5.p1 ID=MSTRG.13926.5.p1|Name=MSTRG.13926.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6786bp|location=Sequence derived from alignment at sc0000113_pilon:1087214..1090645+ (Clytia hemisphaerica_ch_hm2_pilon)
gatACTTCTCAGCCACTTGATGGGTATTTACAACTAACAATATTTGGATA
CAACCGTCAAGGGTCATCAGAATTCAATAATGACAATGCATCCTATTCTG
GACCAACTTTCATACGAATGCTAAAAGGAAAAGTTTTTGTTGTTGGTCCA
AAAGGAATAACAATAGGAAGTGgATCAGAATGTGGCGTTAGAGTACCAAA
AGAGACAAATTTGCAACCATATCACAGCATCGTTCAATATGATGCCGCCT
CCACTACTGAGGGAAAGGGGGAATTCACTGTTTACAAACTTGAGAAATCA
AGATATCAATTTTCTCAAGACAAAACTAAGATTATTCCCCATACAAAAAG
AATATTGGAAGCAGGAACTGTATTTTCAACTGGAAATATCAAATGGCTTG
TATCAGCAGTTCccattcaaaaacttttattgacCAAAGCATTTGTGTCA
GTTAGGAACCATTCTCTTGCAGATTTCTTAATTCACATGGAAGAAATTGA
TTCTTGGAATAACAAAATGAACAAGATATTAGAGTCAGGTATAACAGATG
AAGAGAAAGAGCTCTTGACAAAGCAAATTGTTGATTTGAATACTGAAGAG
GATCAGAACTTTGTTATGTGTGTTGATAAATCGAACGAAATATTGTCAAA
CATTAGTAATGATAATTTCAACTTCCGTTACACTGAAGCTAATCTGTATA
GTCATTTTTCATTGCTTCATGTTGCTGTTGATTATGGTTGCCAAGAGATA
GTAAAATGTCTGCTGGAAAGAAAAATaTCGgtgaaccTACAATGTGGACA
GTACTCTTTCACTCCTTTACATATTGCGTCTAAACACGGGAATGAAACAA
TGGTCAGGTTTCTTATTGAGCATGGTGCAGAATTAAATATCAAAGATTCA
TACAATGAAACTGCTATCGAAAAgactgaaaattttagaatgaggcattt
ttGCTTACTTCTACAAGACTTTTCAACTGCATGCGGATTTGGTGATCTGC
ATAATGTTCAAAGGATATTCAAGGAAGAACCACTTTGTTTAGATGCTAAA
GGATACAGGCCAGAGTCAACGAAGTGGATAGCCAGTATTGTCGGACAGCT
CTACACATCGCAACACTGTATGATCAAGTAGgatACTTCTCAGCCACTTG
ATGGGTATTTACAACTAACAATATTTGGATACAACCGTCAAGGGTCATCA
GAATTCAATAATGACAATGCATCCTATTCTGGACCAACTTTCATACGAAT
GCTAAAAGGAAAAGTTTTTGTTGTTGGTCCAAAAGGAATAACAATAGGAA
GTGgATCAGAATGTGGCGTTAGAGTACCAAAAGAGACAAATTTGCAACCA
TATCACAGCATCGTTCAATATGATGCCGCCTCCACTACTGAGGGAAAGGG
GGAATTCACTGTTTACAAACTTGAGAAATCAAGATATCAATTTTCTCAAG
ACAAAACTAAGATTATTCCCCATACAAAAAGAATATTGGAAGCAGGAACT
GTATTTTCAACTGGAAATATCAAATGGCTTGTATCAGCAGTTCccattca
aaaacttttattgacCAAAGCATTTGTGTCAGTTAGGAACCATTCTCTTG
CAGATTTCTTAATTCACATGGAAGAAATTGATTCTTGGAATAACAAAATG
AACAAGATATTAGAGTCAGGTATAACAGATGAAGAGAAAGAGCTCTTGAC
AAAGCAAATTGTTGATTTGAATACTGAAGAGGATCAGAACTTTGTTATGT
GTGTTGATAAATCGAACGAAATATTGTCAAACATTAGTAATGATAATTTC
AACTTCCGTTACACTGAAGCTAATCTGTATAGTCATTTTTCATTGCTTCA
TGTTGCTGTTGATTATGGTTGCCAAGAGATAGTAAAATGTCTGCTGGAAA
GAAAAATaTCGgtgaaccTACAATGTGGACAGTACTCTTTCACTCCTTTA
CATATTGCGTCTAAACACGGGAATGAAACAATGGTCAGGTTTCTTATTGA
GCATGGTGCAGAATTAAATATCAAAGATTCATACAATGAAACTGCTATCG
AAAAgactgaaaattttagaatgaggcatttttGCTTACTTCTACAAGAC
TTTTCAACTGCATGCGGATTTGGTGATCTGCATAATGTTCAAAGGATATT
CAAGGAAGAACCACTTTGTTTAGATGCTAAAGGATACAGGCCAGAGTCAA
CGAAGTGGATAGCCAGTATTGTCGGACAGCTCTACACATCGCAACACTGT
ATGATCAAGTAGgatACTTCTCAGCCACTTGATGGGTATTTACAACTAAC
AATATTTGGATACAACCGTCAAGGGTCATCAGAATTCAATAATGACAATG
CATCCTATTCTGGACCAACTTTCATACGAATGCTAAAAGGAAAAGTTTTT
GTTGTTGGTCCAAAAGGAATAACAATAGGAAGTGgATCAGAATGTGGCGT
TAGAGTACCAAAAGAGACAAATTTGCAACCATATCACAGCATCGTTCAAT
ATGATGCCGCCTCCACTACTGAGGGAAAGGGGGAATTCACTGTTTACAAA
CTTGAGAAATCAAGATATCAATTTTCTCAAGACAAAACTAAGATTATTCC
CCATACAAAAAGAATATTGGAAGCAGGAACTGTATTTTCAACTGGAAATA
TCAAATGGCTTGTATCAGCAGTTCccattcaaaaacttttattgacCAAA
GCATTTGTGTCAGTTAGGAACCATTCTCTTGCAGATTTCTTAATTCACAT
GGAAGAAATTGATTCTTGGAATAACAAAATGAACAAGATATTAGAGTCAG
GTATAACAGATGAAGAGAAAGAGCTCTTGACAAAGCAAATTGTTGATTTG
AATACTGAAGAGGATCAGAACTTTGTTATGTGTGTTGATAAATCGAACGA
AATATTGTCAAACATTAGTAATGATAATTTCAACTTCCGTTACACTGAAG
CTAATCTGTATAGTCATTTTTCATTGCTTCATGTTGCTGTTGATTATGGT
TGCCAAGAGATAGTAAAATGTCTGCTGGAAAGAAAAATaTCGgtgaaccT
ACAATGTGGACAGTACTCTTTCACTCCTTTACATATTGCGTCTAAACACG
GGAATGAAACAATGGTCAGGTTTCTTATTGAGCATGGTGCAGAATTAAAT
ATCAAAGATTCATACAATGAAACTGCTATCGAAAAgactgaaaattttag
aatgaggcatttttGCTTACTTCTACAAGACTTTTCAACTGCATGCGGAT
TTGGTGATCTGCATAATGTTCAAAGGATATTCAAGGAAGAACCACTTTGT
TTAGATGCTAAAGGATACAGGCCAGAGTCAACGAAGTGGATAGCCAGTAT
TGTCGGACAGCTCTACACATCGCAACACTGTATGATCAAGTAGgatACTT
CTCAGCCACTTGATGGGTATTTACAACTAACAATATTTGGATACAACCGT
CAAGGGTCATCAGAATTCAATAATGACAATGCATCCTATTCTGGACCAAC
TTTCATACGAATGCTAAAAGGAAAAGTTTTTGTTGTTGGTCCAAAAGGAA
TAACAATAGGAAGTGgATCAGAATGTGGCGTTAGAGTACCAAAAGAGACA
AATTTGCAACCATATCACAGCATCGTTCAATATGATGCCGCCTCCACTAC
TGAGGGAAAGGGGGAATTCACTGTTTACAAACTTGAGAAATCAAGATATC
AATTTTCTCAAGACAAAACTAAGATTATTCCCCATACAAAAAGAATATTG
GAAGCAGGAACTGTATTTTCAACTGGAAATATCAAATGGCTTGTATCAGC
AGTTCccattcaaaaacttttattgacCAAAGCATTTGTGTCAGTTAGGA
ACCATTCTCTTGCAGATTTCTTAATTCACATGGAAGAAATTGATTCTTGG
AATAACAAAATGAACAAGATATTAGAGTCAGGTATAACAGATGAAGAGAA
AGAGCTCTTGACAAAGCAAATTGTTGATTTGAATACTGAAGAGGATCAGA
ACTTTGTTATGTGTGTTGATAAATCGAACGAAATATTGTCAAACATTAGT
AATGATAATTTCAACTTCCGTTACACTGAAGCTAATCTGTATAGTCATTT
TTCATTGCTTCATGTTGCTGTTGATTATGGTTGCCAAGAGATAGTAAAAT
GTCTGCTGGAAAGAAAAATaTCGgtgaaccTACAATGTGGACAGTACTCT
TTCACTCCTTTACATATTGCGTCTAAACACGGGAATGAAACAATGGTCAG
GTTTCTTATTGAGCATGGTGCAGAATTAAATATCAAAGATTCATACAATG
AAACTGCTATCGAAAAgactgaaaattttagaatgaggcatttttGCTTA
CTTCTACAAGACTTTTCAACTGCATGCGGATTTGGTGATCTGCATAATGT
TCAAAGGATATTCAAGGAAGAACCACTTTGTTTAGATGCTAAAGGATACA
GGCCAGAGTCAACGAAGTGGATAGCCAGTATTGTCGGACAGCTCTACACA
TCGCAACACTGTATGATCAAGTAGgatACTTCTCAGCCACTTGATGGGTA
TTTACAACTAACAATATTTGGATACAACCGTCAAGGGTCATCAGAATTCA
ATAATGACAATGCATCCTATTCTGGACCAACTTTCATACGAATGCTAAAA
GGAAAAGTTTTTGTTGTTGGTCCAAAAGGAATAACAATAGGAAGTGgATC
AGAATGTGGCGTTAGAGTACCAAAAGAGACAAATTTGCAACCATATCACA
GCATCGTTCAATATGATGCCGCCTCCACTACTGAGGGAAAGGGGGAATTC
ACTGTTTACAAACTTGAGAAATCAAGATATCAATTTTCTCAAGACAAAAC
TAAGATTATTCCCCATACAAAAAGAATATTGGAAGCAGGAACTGTATTTT
CAACTGGAAATATCAAATGGCTTGTATCAGCAGTTCccattcaaaaactt
ttattgacCAAAGCATTTGTGTCAGTTAGGAACCATTCTCTTGCAGATTT
CTTAATTCACATGGAAGAAATTGATTCTTGGAATAACAAAATGAACAAGA
TATTAGAGTCAGGTATAACAGATGAAGAGAAAGAGCTCTTGACAAAGCAA
ATTGTTGATTTGAATACTGAAGAGGATCAGAACTTTGTTATGTGTGTTGA
TAAATCGAACGAAATATTGTCAAACATTAGTAATGATAATTTCAACTTCC
GTTACACTGAAGCTAATCTGTATAGTCATTTTTCATTGCTTCATGTTGCT
GTTGATTATGGTTGCCAAGAGATAGTAAAATGTCTGCTGGAAAGAAAAAT
aTCGgtgaaccTACAATGTGGACAGTACTCTTTCACTCCTTTACATATTG
CGTCTAAACACGGGAATGAAACAATGGTCAGGTTTCTTATTGAGCATGGT
GCAGAATTAAATATCAAAGATTCATACAATGAAACTGCTATCGAAAAgac
tgaaaattttagaatgaggcatttttGCTTACTTCTACAAGACTTTTCAA
CTGCATGCGGATTTGGTGATCTGCATAATGTTCAAAGGATATTCAAGGAA
GAACCACTTTGTTTAGATGCTAAAGGATACAGGCCAGAGTCAACGAAGTG
GATAGCCAGTATTGTCGGACAGCTCTACACATCGCAACACTGTATGATCA
AGTAGgatACTTCTCAGCCACTTGATGGGTATTTACAACTAACAATATTT
GGATACAACCGTCAAGGGTCATCAGAATTCAATAATGACAATGCATCCTA
TTCTGGACCAACTTTCATACGAATGCTAAAAGGAAAAGTTTTTGTTGTTG
GTCCAAAAGGAATAACAATAGGAAGTGgATCAGAATGTGGCGTTAGAGTA
CCAAAAGAGACAAATTTGCAACCATATCACAGCATCGTTCAATATGATGC
CGCCTCCACTACTGAGGGAAAGGGGGAATTCACTGTTTACAAACTTGAGA
AATCAAGATATCAATTTTCTCAAGACAAAACTAAGATTATTCCCCATACA
AAAAGAATATTGGAAGCAGGAACTGTATTTTCAACTGGAAATATCAAATG
GCTTGTATCAGCAGTTCccattcaaaaacttttattgacCAAAGCATTTG
TGTCAGTTAGGAACCATTCTCTTGCAGATTTCTTAATTCACATGGAAGAA
ATTGATTCTTGGAATAACAAAATGAACAAGATATTAGAGTCAGGTATAAC
AGATGAAGAGAAAGAGCTCTTGACAAAGCAAATTGTTGATTTGAATACTG
AAGAGGATCAGAACTTTGTTATGTGTGTTGATAAATCGAACGAAATATTG
TCAAACATTAGTAATGATAATTTCAACTTCCGTTACACTGAAGCTAATCT
GTATAGTCATTTTTCATTGCTTCATGTTGCTGTTGATTATGGTTGCCAAG
AGATAGTAAAATGTCTGCTGGAAAGAAAAATaTCGgtgaaccTACAATGT
GGACAGTACTCTTTCACTCCTTTACATATTGCGTCTAAACACGGGAATGA
AACAATGGTCAGGTTTCTTATTGAGCATGGTGCAGAATTAAATATCAAAG
ATTCATACAATGAAACTGCTATCGAAAAgactgaaaattttagaatgagg
catttttGCTTACTTCTACAAGACTTTTCAACTGCATGCGGATTTGGTGA
TCTGCATAATGTTCAAAGGATATTCAAGGAAGAACCACTTTGTTTAGATG
CTAAAGGATACAGGCCAGAGTCAACGAAGTGGATAGCCAGTATTGTCGGA
CAGCTCTACACATCGCAACACTGTATGATCAAGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000113_pilon | genome | sc0000113_pilon:1087214..1090645 + |
|
