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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000113_pilon:888823..894868+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13912.1.p1 ID=MSTRG.13912.1.p1|Name=MSTRG.13912.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6046bp|location=Sequence derived from alignment at sc0000113_pilon:888823..894868+ (Clytia hemisphaerica_ch_hm2_pilon)
gtttttttttcttctctaatttcCCAATAGAAAAGATTGTCTTTAATTAC
AATCTATGCAGTGAAGATCATATGGCATatgtcatttttgttttttttca
gaaagaaaGTATTTTCAGAGATTTCATAAATTAAAATTGGTTTTTGTGTT
TGGAGgacaaaacttgaaaatatgatacAATTCCATGATTATAAAGTTGT
GTTTACATATTGTGTGGTTTTGGttaatttgattggtcgaaatttAGGTA
AGCTATTGGTTATAGTAATGCTGCTTCGAGTTACTGCTATTTTTTAGGTC
CAAAGATCAGAAAAATGAAGTCTAAATTGATAATTCGATCATCTGAGTCT
CTCGATTACATCGTCGGTATCCACAACCTAATGCCAAGTAATATACTTAG
TAAAGACGAAAAATCCAACTAGCACTATAAACGGATAGCTGGGTACTGAG
TACAAATTATCTGATTTGTAAACTTTATGCGCGTTTTGCTCAGATaaaat
ggagtttttataagatactttaataatTGGTCATTTGAAGTAATAAAAAT
GGCGCGTTGTTTAGAAAAAGTAACAAAATTGTTTTATTACTGGTTAACGA
CCAACCAAATCAAATAAGAGCTTGTAAAACctccatctcgtcccattAAG
ATGGGTGGGAATGGAAAATATGTCGATaaggaatctttaaaaaaaacttt
agtgAGTAAAGCTCATTATTTGCATAATATTGGGGTTCATTCGAACtatt
ttatatcttttttcacCTTCATTTTATAGCCTGTGATGTCAAAGTACCCA
AACCTAGCCTGGTCATATTGGAAGGAAAACAGGCTACCTTAGAATGGGAT
ATCCATCGCCCTTGGAATTATATCTTGAATAAAGTCTCATGTTACAAAAA
AGTTAAAGGCAAACAAACTATTCTAGTGGTCAAAAAGAGTGGAACAGCTT
TCATTAAGACTCGGAAAGCACCAGACAGAATGGCAACAGAGAAATACGGA
GACCGATATTTGATTGTGATACATAATGTCACCAAAGAAGATGAAGCGAC
TTACAATTGTCGAGTTCAATGTATCTCTGGAAGACAGTTCTATTATAGTA
AGGATGTACAACTGGCTGTAGGTAAGGATAATTTGGCTTAAAACACAAGa
ataaattttaagaacaatttcacactcagatttcagaaaataCTGATTTT
CTTTGGGCCCTTTTCAGCCTTTAACAAGTGAATATTTTACTAGAGCATTG
GTAATGTTTAAgtcaacaagctagatgctgaatggacctacctgatgatg
aaagttggatagcaatgcgaggagaaaaaaatcagtcaaaaagtatagcg
tttagcgaaaatgcataacgcaataaattcatcattgattgttgatgggg
ggagagggaagggttgtaggggaaaaataaatagaaagttctggtcgcaa
aaatcagttttattgacaattgaatcatgcttgatgttgttatcaataat
gtttttgagtgaaatacaagaaaaaaaatctaatgaaaatctgcaaaaac
ggcgatttccggcattttcaaccaaaaaaaaattttctcaaaaatcaaaa
aaactcagccatgttttaaGCATTGTAGTGAGGtcaggtagcacataaaa
acgtaagaatacttcagatggtgattaaagcatgaaatttggatcatatg
atccttagagggtctaaaacttaattttaaacagtaacaccaaattttgc
cacctggccacctgccagatgacgtcatcaggtggctgggcaaaaaatta
tttttttgaagatattcaaaatctgatggttccagcagaaagagcatgaa
atgctgataaaaattgaggtataaaacatgccttgaaaatcttcctatca
aaagttatggaggttgaaagttttttgatgacgtcatcataagcctttcc
aggcaaaacttaaaaacctcgtaattttggtacaaattgaccaaatttca
tgttttatacatgaattcatatcaaaattcattgctttttccgattccga
tgttcaaattgaattaaaagctttaaatcctacagaatactaaaacttag
attttgagctttacaaggcaaatcaacgcagcgttctcccttcaggagca
cagtgtacaaccaactaatttttttggatgttttaagccttcctatgttg
tttagacccaagcatcagatggaacttaaaattttgacatggaGTCATGt
ttaaaacactaaatttggtcaactagttccgttattacgggattttaggt
tttgcctggaaaggcttatgatgacgtcatcacaaaactttaaaccttca
taacttttgataggaagattttgaaggcatgttttatacctcgattttca
tcagcatttcatgctctttccgctgataccatcagattttaaatattttc
aaaaaaataaatttttgctaagccacctgatgacgtcatctggcaggtgg
ccaggtggcaaagtttggtgttactgttcaaaattaagttttagaccctc
taaggatcatctgtgccaaatttcatgctttaatcaccatctgaagtatt
tttgtgctaacagacctcactattgGGAATACgcatttttctgcaaaaaa
tcagaaaaaacttttgatgaaaattcgagaaaatgtaaaaaatccggaaa
aaaatatttttcgaaaatcgggctccgtcacaatttaggtattgacattt
tgcatcaatgtgcaaaatttcatgaaaaaatataaagtacagctcaagaa
attcaagaaataccgtttttccggcgaaaatcggctgttccggcgatttt
tagaaagttccggcttcaaaaatcaattttattgaaaattgaaacatgct
tgatggtgggcattgctattgataatctttttgaatgaaaaaacaaccaa
ttatatggaaaagtccaatgaaaatccagaaaaacggcgatttccggcat
atttccggcattttcggccggaaaaaattttttctcaaaaatcggactag
accatgttttgggcattgttaatacgcatctttgagcaaaaaatcagaaa
aaactaatgatgaaatctcgagaaaatgccgaaaaaccagTttttccggc
atatttccgccattttctgccggaaaattttttttttcgaaaatcgggct
ccgtcacattttgggcattgccattttgcatcattgtgcaaaaaaataga
aaaaactaatgagccgatcccgagaaaagctggcaacagacgaacgaacg
aacggacgaacgaacggacaagggttaatttaaaggactaccttaggtag
gtccaaaaaggttcAGAAACGTAAGAATGAAAGTACGATAGGAAAAGCTC
CTTGTCAATGATCCTTTGGTTATTTCAGAGTTACAATTCTTTCCCTTGGC
TACAAAATATTGCAAACTAAACATGCAATATTTCGAGAAACTTTTAATCT
TAGATTAGGATTAGTGGTAATGCCAATAAAACAACTTAAATGAAATTTCC
AATTTTGTAACACGAGTCTATACAGGTCTGACCTCATATTTGTCATTCTA
ATTCCAAAATGACttattgtacacgtttttttatataagaacatccaaaa
cttttgaagcctaaaaatgttcttaaaaatgttcttactttcaccatttt
gtgaccatttttacccattttcctaagaaaacgggTGTTTGAGAGcccat
gaagccttaaaatgttctttggccatcgaagccttatgttcttatatagt
ttgttcttataaaaacaacgtgtatcAGCCTGTTAAAGATTGGTTCCTTC
TGAGAAATGTAATATATTCCTGAGATGGATGGGGGCAGTATAAAATGGAT
AAGACACTCACAGTGTATTTTTCACAGACAATTGATTTTTcgaaatagtt
ttagatctagTTATCTCGAATAGTTTCGCAAGAAATTCGGGATCTATTCC
CAAAGGTCACacttttgaaacttcaaaatatgaacGAGTGAAATTCATCC
GGAATATCACGGATAAAATTTCTGGTTAATCACATGCAAGATTATACAGC
CTACAGccttattcattttttcttctactTCTTTTTCACTTTAGAGTcaa
acaacaagacaagcacagacaatggaaaacaccccgataacaaagacaac
aatacaaaagGCAACGGAGGAGACAATAACGAAACGAATACACTATTGAT
TGTGATTGGCATCATTAGTGTTCTATTGTTCATTGTAACGACTGTTGCTA
TTGTTTTGTGTATCATTAGGAGTAAGTAAGCTATTTTAAACACCCCAATT
AgccttaaaagtttttttgacccCCTGAAGTTAACAACTCTTAAATATTC
ACTGATTACTCCCTAAACAGATTTTAAAACCATTGTGAGTAATGAATGCC
ATGGGCGTTTCGTGAATAGACGCAATTACTGGcttaaaaatatattcaaa
atacaatttttgcaTTATTGTATTTTCCAGAGATTTAACCTCGAACCCAG
TACAGTTAATATCACGACTTTACGAGAAAgttcttttgaatttattatAG
GAAACAAAAAGAGGAGGGAAAGAAACGGTGAAACACAATCACTAAGAAAA
AGTAAGTCGATGTacaattttcattgtttgcttGACTTCTCTTGTTGTTT
ATAcactgtctcacaaccccgttGGAGcttcttcccacagtggggatgaa
aatctcaatcaaaatcaagatgaaattctattgttctcaggtCAAGAATT
CCAGTGGGTAGGGGGTCATACCAGGCTTGTGACACAGTGGTCTTTATATG
CGGTTATATGATATTTTCTATAAACActttttcacatgaaaaatcTTATA
CTGTCAATAAAATTCTCGtgtatgtatgtatatgtatgtatTATAAGGAA
GATAACGTTGCCAAAGAGTGTCCAATCCAATGAAATTTCCTTAAATATAC
AAAATTTATTCTTCTCCATTCCAGACACGCATTCCGAAGAGCAACAGTAT
GCTGATCTATCAGATTATCAACCTAATACTTACGACCAGTTACGCCCACC
ACCCGCCCAATACGAAACACCTGTAGACGATACTTATACTTCTTTACAAC
AGactgataaaaatatttacgaGAGACCGATGGAGATAAGTAATGGAATT
TATGAATATGTGGAGCCGAATAATGTGTTACCGCCAAGGTTTAAGAAATG
AGCGATAATTTACGCCCACGTTGTTTCAACTTCCAGTTGACGTTTTGTGG
GTTTTAAGAATGTTAGATAGAGCAGAGGTTGTTTTAACGTACTGTGTCAG
CTGGACATTGATCAATGAGATATCTCAATAACATTATTTTGACGTTCATT
CAACGTTATATAGTCGTTGTTTTGACGCGTTTCATATCAGTCGATGGATT
TTAAGCTACCTGACGTTTTTGGTTTTATGGATCACGATATGATACGAATC
AATAATAATCAAACATGCAGCTATATTATTTTCTCGAACAGAAATGAAAA
TGTATTCACTCATTTGTAGGTAGTGAAGGATTTATTCTGGTAAAAAGGAA
ATGGAAATATAGCTTCAGGCTCGTTCTTCAAAGTCATAAGACGGACGCTA
AAATAATGTGAAAAAGAATCATGAAAAATACAACGGCGAATCAGATGGAT
TATAATGACTTGATCGATTTGATAtgcgaaatttctattttcgaGTTTTA
TATTGTTGTCGTAAGTTGTCAATGGCTGTTGACGATTTTCATGGTGGTCA
AACGCGATATCACACTGGGTAATGATCGTTTTGTAATTGTTTCTGGAAAT
TCTATTGTggtttttaactttaaatttaTTCATGAAATATTACAGAGGAT
CTTTTTAGAATACCTTTTTATTCTATTGTACATAATTATACAGTAAGTTA
TAGTAGATAATTATAATATTGACATTGATTTAATTAATTAGAAATCAAGA
GAAACGAGATATAAAGTGACATTTCTATATGCCACTTTGATCCGGT Coding sequence (CDS) from alignment at sc0000113_pilon:888823..894868+ >MSTRG.13912.1.p1 ID=MSTRG.13912.1.p1|Name=MSTRG.13912.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4365bp|location=Sequence derived from alignment at sc0000113_pilon:888823..894868+ (Clytia hemisphaerica_ch_hm2_pilon)
atgatacAATTCCATGATTATAAAGTTGTGTTTACATATTGTGTGGTTTT
GGttaatttgattggtcgaaatttAGCCTGTGATGTCAAAGTACCCAAAC
CTAGCCTGGTCATATTGGAAGGAAAACAGGCTACCTTAGAATGGGATATC
CATCGCCCTTGGAATTATATCTTGAATAAAGTCTCATGTTACAAAAAAGT
TAAAGGCAAACAAACTATTCTAGTGGTCAAAAAGAGTGGAACAGCTTTCA
TTAAGACTCGGAAAGCACCAGACAGAATGGCAACAGAGAAATACGGAGAC
CGATATTTGATTGTGATACATAATGTCACCAAAGAAGATGAAGCGACTTA
CAATTGTCGAGTTCAATGTATCTCTGGAAGACAGTTCTATTATAGTAAGG
ATGTACAACTGGCTGTAGAGTcaaacaacaagacaagcacagacaatgga
aaacaccccgataacaaagacaacaatacaaaagGCAACGGAGGAGACAA
TAACGAAACGAATACACTATTGATTGTGATTGGCATCATTAGTGTTCTAT
TGTTCATTGTAACGACTGTTGCTATTGTTTTGTGTATCATTAGGAGAAAC
AAAAAGAGGAGGGAAAGAAACGGTGAAACACAATCACTAAGAAAAAACAC
GCATTCCGAAGAGCAACAGTATGCTGATCTATCAGATTATCAACCTAATA
CTTACGACCAGTTACGCCCACCACCCGCCCAATACGAAACACCTGTAGAC
GATACTTATACTTCTTTACAACAGactgataaaaatatttacgaGAGACC
GATGGAGATAAGTAATGGAATTTATGAATATGTGGAGCCGAATAATGTGT
TACCGCCAAGGTTTAAGAAATGAatgatacAATTCCATGATTATAAAGTT
GTGTTTACATATTGTGTGGTTTTGGttaatttgattggtcgaaatttAGC
CTGTGATGTCAAAGTACCCAAACCTAGCCTGGTCATATTGGAAGGAAAAC
AGGCTACCTTAGAATGGGATATCCATCGCCCTTGGAATTATATCTTGAAT
AAAGTCTCATGTTACAAAAAAGTTAAAGGCAAACAAACTATTCTAGTGGT
CAAAAAGAGTGGAACAGCTTTCATTAAGACTCGGAAAGCACCAGACAGAA
TGGCAACAGAGAAATACGGAGACCGATATTTGATTGTGATACATAATGTC
ACCAAAGAAGATGAAGCGACTTACAATTGTCGAGTTCAATGTATCTCTGG
AAGACAGTTCTATTATAGTAAGGATGTACAACTGGCTGTAGAGTcaaaca
acaagacaagcacagacaatggaaaacaccccgataacaaagacaacaat
acaaaagGCAACGGAGGAGACAATAACGAAACGAATACACTATTGATTGT
GATTGGCATCATTAGTGTTCTATTGTTCATTGTAACGACTGTTGCTATTG
TTTTGTGTATCATTAGGAGAAACAAAAAGAGGAGGGAAAGAAACGGTGAA
ACACAATCACTAAGAAAAAACACGCATTCCGAAGAGCAACAGTATGCTGA
TCTATCAGATTATCAACCTAATACTTACGACCAGTTACGCCCACCACCCG
CCCAATACGAAACACCTGTAGACGATACTTATACTTCTTTACAACAGact
gataaaaatatttacgaGAGACCGATGGAGATAAGTAATGGAATTTATGA
ATATGTGGAGCCGAATAATGTGTTACCGCCAAGGTTTAAGAAATGAatga
tacAATTCCATGATTATAAAGTTGTGTTTACATATTGTGTGGTTTTGGtt
aatttgattggtcgaaatttAGCCTGTGATGTCAAAGTACCCAAACCTAG
CCTGGTCATATTGGAAGGAAAACAGGCTACCTTAGAATGGGATATCCATC
GCCCTTGGAATTATATCTTGAATAAAGTCTCATGTTACAAAAAAGTTAAA
GGCAAACAAACTATTCTAGTGGTCAAAAAGAGTGGAACAGCTTTCATTAA
GACTCGGAAAGCACCAGACAGAATGGCAACAGAGAAATACGGAGACCGAT
ATTTGATTGTGATACATAATGTCACCAAAGAAGATGAAGCGACTTACAAT
TGTCGAGTTCAATGTATCTCTGGAAGACAGTTCTATTATAGTAAGGATGT
ACAACTGGCTGTAGAGTcaaacaacaagacaagcacagacaatggaaaac
accccgataacaaagacaacaatacaaaagGCAACGGAGGAGACAATAAC
GAAACGAATACACTATTGATTGTGATTGGCATCATTAGTGTTCTATTGTT
CATTGTAACGACTGTTGCTATTGTTTTGTGTATCATTAGGAGAAACAAAA
AGAGGAGGGAAAGAAACGGTGAAACACAATCACTAAGAAAAAACACGCAT
TCCGAAGAGCAACAGTATGCTGATCTATCAGATTATCAACCTAATACTTA
CGACCAGTTACGCCCACCACCCGCCCAATACGAAACACCTGTAGACGATA
CTTATACTTCTTTACAACAGactgataaaaatatttacgaGAGACCGATG
GAGATAAGTAATGGAATTTATGAATATGTGGAGCCGAATAATGTGTTACC
GCCAAGGTTTAAGAAATGAatgatacAATTCCATGATTATAAAGTTGTGT
TTACATATTGTGTGGTTTTGGttaatttgattggtcgaaatttAGCCTGT
GATGTCAAAGTACCCAAACCTAGCCTGGTCATATTGGAAGGAAAACAGGC
TACCTTAGAATGGGATATCCATCGCCCTTGGAATTATATCTTGAATAAAG
TCTCATGTTACAAAAAAGTTAAAGGCAAACAAACTATTCTAGTGGTCAAA
AAGAGTGGAACAGCTTTCATTAAGACTCGGAAAGCACCAGACAGAATGGC
AACAGAGAAATACGGAGACCGATATTTGATTGTGATACATAATGTCACCA
AAGAAGATGAAGCGACTTACAATTGTCGAGTTCAATGTATCTCTGGAAGA
CAGTTCTATTATAGTAAGGATGTACAACTGGCTGTAGAGTcaaacaacaa
gacaagcacagacaatggaaaacaccccgataacaaagacaacaatacaa
aagGCAACGGAGGAGACAATAACGAAACGAATACACTATTGATTGTGATT
GGCATCATTAGTGTTCTATTGTTCATTGTAACGACTGTTGCTATTGTTTT
GTGTATCATTAGGAGAAACAAAAAGAGGAGGGAAAGAAACGGTGAAACAC
AATCACTAAGAAAAAACACGCATTCCGAAGAGCAACAGTATGCTGATCTA
TCAGATTATCAACCTAATACTTACGACCAGTTACGCCCACCACCCGCCCA
ATACGAAACACCTGTAGACGATACTTATACTTCTTTACAACAGactgata
aaaatatttacgaGAGACCGATGGAGATAAGTAATGGAATTTATGAATAT
GTGGAGCCGAATAATGTGTTACCGCCAAGGTTTAAGAAATGAatgatacA
ATTCCATGATTATAAAGTTGTGTTTACATATTGTGTGGTTTTGGttaatt
tgattggtcgaaatttAGCCTGTGATGTCAAAGTACCCAAACCTAGCCTG
GTCATATTGGAAGGAAAACAGGCTACCTTAGAATGGGATATCCATCGCCC
TTGGAATTATATCTTGAATAAAGTCTCATGTTACAAAAAAGTTAAAGGCA
AACAAACTATTCTAGTGGTCAAAAAGAGTGGAACAGCTTTCATTAAGACT
CGGAAAGCACCAGACAGAATGGCAACAGAGAAATACGGAGACCGATATTT
GATTGTGATACATAATGTCACCAAAGAAGATGAAGCGACTTACAATTGTC
GAGTTCAATGTATCTCTGGAAGACAGTTCTATTATAGTAAGGATGTACAA
CTGGCTGTAGAGTcaaacaacaagacaagcacagacaatggaaaacaccc
cgataacaaagacaacaatacaaaagGCAACGGAGGAGACAATAACGAAA
CGAATACACTATTGATTGTGATTGGCATCATTAGTGTTCTATTGTTCATT
GTAACGACTGTTGCTATTGTTTTGTGTATCATTAGGAGAAACAAAAAGAG
GAGGGAAAGAAACGGTGAAACACAATCACTAAGAAAAAACACGCATTCCG
AAGAGCAACAGTATGCTGATCTATCAGATTATCAACCTAATACTTACGAC
CAGTTACGCCCACCACCCGCCCAATACGAAACACCTGTAGACGATACTTA
TACTTCTTTACAACAGactgataaaaatatttacgaGAGACCGATGGAGA
TAAGTAATGGAATTTATGAATATGTGGAGCCGAATAATGTGTTACCGCCA
AGGTTTAAGAAATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000113_pilon | genome | sc0000113_pilon:888823..894868 + |
|
