MSTRG.13910.1.p1 (mRNA) -

Overview
NameMSTRG.13910.1.p1
Unique NameMSTRG.13910.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000113_pilon:855712..857118-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13910.1.p1 ID=MSTRG.13910.1.p1|Name=MSTRG.13910.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1407bp|location=Sequence derived from alignment at sc0000113_pilon:855712..857118- (Clytia hemisphaerica_ch_hm2_pilon)
TATAGAAGAAGTTATTTCAAAAATACTTCAGAAGAAATTATCATCTTTGA
TAAAGTGCAAAACTTATGATGACTTCCAATCAAAGAATTCGCTTGGTGTG
GTGGCTGTTTTGTCTTTCAATCATTTCAAGGTATTATTTTTCTATCAAGT
TTTTACCTATTTGATTGAATGATCTGAATTTGCTTGGATAGTTTTCTGGA
TGGACTTTCAAGAATTACCGCTTTGAATTACAACCCCTTTTTTTAATCTC
ACTTTAGCATTTGTGGAAGCAAAACTACCGAATCAAAAGTTAATCGTTCA
AAAAGAAATTTAGGAGGAATTCTTCAAAATACAGAGCTTCCACGTGGAAA
AAAAGGCGAAATATTCGAGGCTACATTGGGAAAGCTAACACCAATTCTAT
CTTCATACCATCTTGATAAAGCTGCCGAAGACGCTTTTCCAAAAAATCTC
GAGGAGTTGAGTAAAACAAGTAAAACCTACCATTCAATCCCAGAGGTTGC
GCTAAGAGGAACGAAGGGTACTGCTGCTATCTATGATATTGTAATGAAAA
ATCTTATTGCACAACAAAAGGACATCCCAAATTTACATGACGGGGCTGGT
TTGACTTTATATCGTGGTGATGACCGTAATGCAGATCAAATAATTCAGGC
TAACGGCTTTTTCGGCTTTGCTCCTATCACAGTCGAGCATGCAAGACTAA
TCGCACCATATTGGCAAAACATGGCGATGGCAGAAAAATGGCGAGTACAA
ACAGGAATTCATGGCCCTATGCCTTTCGTAGCAACAACACCAGAAAAAAG
TCCCCCTAAAGGTAAATACCAATACGAAATAACGGTACCCATTCCAAAAG
AGAGGGCCGAAGGATTGGGCGTGCTTCTTCTTCACGAAGGAACAAATGAA
AAAGATTTTTCCAAATCCAATATCATTGCTCTTCGTATGAATGGCCATGA
AACTGACTTTGTCACTGGTATTCCCTTAAAATGGATCGTTGGATGCAGAA
AAGAAGAAAAAGAGGAAAAAGAGTATCTACCTTTAACGGATCCTAAATCT
TCTTGTCGTTAACACTATAAGATGTACACATTTTTTATAAGCAACTCCAT
TTTCCCCTTCAGGTCTAAGGATGCTTAGCCTTTCAAGCTAATTTCTAAAA
AATTTGTCTAAACCCCTCTCACAATTAAAATGCATTTCAGGTTCCACCAT
TTCCATTTCTTAGAATTTGAAAATATAGTCCTCGGCCCTTAGCAACTAGG
TTGCTTATAAAAAAAGTTAAAAAACGTGTAATCCAATGTCATACCGGGTG
CGCCACAAAAAAGTTTCTCTCTTTAAAGTGAATTTTCTCGAAGTCTGAAA
ATTTGAAGATAACCAATCTTTTTTCATTAAAAAGAAGAAAAATAAACTTA
AATTTTG

Coding sequence (CDS) from alignment at sc0000113_pilon:855712..857118-

>MSTRG.13910.1.p1 ID=MSTRG.13910.1.p1|Name=MSTRG.13910.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1740bp|location=Sequence derived from alignment at sc0000113_pilon:855712..857118- (Clytia hemisphaerica_ch_hm2_pilon)
CATTTGTGGAAGCAAAACTACCGAATCAAAAGTTAATCGTTCAAAAAGAA
ATTTAGGAGGAATTCTTCAAAATACAGAGCTTCCACGTGGAAAAAAAGGC
GAAATATTCGAGGCTACATTGGGAAAGCTAACACCAATTCTATCTTCATA
CCATCTTGATAAAGCTGCCGAAGACGCTTTTCCAAAAAATCTCGAGGAGT
TGAGTAAAACAAGTAAAACCTACCATTCAATCCCAGAGGTTGCGCTAAGA
GGAACGAAGGGTACTGCTGCTATCTATGATATTGTAATGAAAAATCTTAT
TGCACAACAAAAGGACATCCCAAATTTACATGACGGGGCTGGTTTGACTT
TATATCGTGGTGATGACCGTAATGCAGATCAAATAATTCAGGCTAACGGC
TTTTTCGGCTTTGCTCCTATCACAGTCGAGCATGCAAGACTAATCGCACC
ATATTGGCAAAACATGGCGATGGCAGAAAAATGGCGAGTACAAACAGGAA
TTCATGGCCCTATGCCTTTCGTAGCAACAACACCAGAAAAAAGTCCCCCT
AAAGGTAAATACCAATACGAAATAACGGTACCCATTCCAAAAGAGAGGGC
CGAAGGATTGGGCGTGCTTCTTCTTCACGAAGGAACAAATGAAAAAGATT
TTTCCAAATCCAATATCATTGCTCTTCGTATGAATGGCCATGAAACTGAC
TTTGTCACTGGTATTCCCTTAAAATGGATCGTTGGATGCAGAAAAGAAGA
AAAAGAGGAAAAAGAGTATCTACCTTTAACGGATCCTAAATCTTCTTGTC
GTTAAATGATGACTTCCAATCAAAGAATTCGCTTGGTGTGGTGGCTGTTT
TGTCTTTCAATCATTTCAAGCATTTGTGGAAGCAAAACTACCGAATCAAA
AGTTAATCGTTCAAAAAGAAATTTAGGAGGAATTCTTCAAAATACAGAGC
TTCCACGTGGAAAAAAAGGCGAAATATTCGAGGCTACATTGGGAAAGCTA
ACACCAATTCTATCTTCATACCATCTTGATAAAGCTGCCGAAGACGCTTT
TCCAAAAAATCTCGAGGAGTTGAGTAAAACAAGTAAAACCTACCATTCAA
TCCCAGAGGTTGCGCTAAGAGGAACGAAGGGTACTGCTGCTATCTATGAT
ATTGTAATGAAAAATCTTATTGCACAACAAAAGGACATCCCAAATTTACA
TGACGGGGCTGGTTTGACTTTATATCGTGGTGATGACCGTAATGCAGATC
AAATAATTCAGGCTAACGGCTTTTTCGGCTTTGCTCCTATCACAGTCGAG
CATGCAAGACTAATCGCACCATATTGGCAAAACATGGCGATGGCAGAAAA
ATGGCGAGTACAAACAGGAATTCATGGCCCTATGCCTTTCGTAGCAACAA
CACCAGAAAAAAGTCCCCCTAAAGGTAAATACCAATACGAAATAACGGTA
CCCATTCCAAAAGAGAGGGCCGAAGGATTGGGCGTGCTTCTTCTTCACGA
AGGAACAAATGAAAAAGATTTTTCCAAATCCAATATCATTGCTCTTCGTA
TGAATGGCCATGAAACTGACTTTGTCACTGGTATTCCCTTAAAATGGATC
GTTGGATGCAGAAAAGAAGAAAAAGAGGAAAAAGAGTATCTACCTTTAAC
GGATCCTAAATCTTCTTGTCGTTAAATGATGACTTCCAATCAAAGAATTC
GCTTGGTGTGGTGGCTGTTTTGTCTTTCAATCATTTCAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13910MSTRG.13910Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13910.1.p1.exon2MSTRG.13910.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13910.1.p1.exon1MSTRG.13910.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13910.1.p1MSTRG.13910.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000113_pilongenomesc0000113_pilon:855712..857118 -