|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:2703417..2705646+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1391.1.p1 ID=MSTRG.1391.1.p1|Name=MSTRG.1391.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2230bp|location=Sequence derived from alignment at sc0000006_pilon:2703417..2705646+ (Clytia hemisphaerica_ch_hm2_pilon)
TGAAAAATGAGATACTGTGGGCCAGTTAGAATACTCAACATGCATTGTAA
AGAAATTATTCGATGGTTTTTCTTAACATTGGAAAATGCATCATAACTTT
CCAAGCGTTTGTGATAAAGTAAAAAGTTTgttatcgttggaaagatattc
aaatgcgcttaaaatattttccactcattttttttcaaaatttgttcaag
aaagtgaagaaaaatgaagaagaaaaaaatgaacttcTTGTAGAGTAATT
ACCATTTTTACAAGAGTGaaacttcaatcttagatcagcAACATATTATA
TGTGTAGGTAAATTGAAATTGAGATCCTGGAGACCCTAAATCATAATCAC
TAAACGTTTTTATCAtttagaaaaacttaaaaattgtgaAAGAACAAGGG
CTAAAATCATAACCATCTTCAACAAAATCTGACTCTACAAGATACCATCA
TAGTTAACTTGAAAGATGAGCTTATGTAGAGAACTTTCATATGTTAGTAT
ACTCAACACTCATGGTGAAGAAATTCTCCAATGGTTTCCAAAGAATGGCA
ATCGCACTGTGGCAggattgaaatatttcattgagATAAATACGTGCATT
CCATTTAACAATCAAGTTCTTTATTACCGTAACCGCGAGCATATGGATTT
GGTATCAATCGGGTCTTATCTCGAATGGCTATTTAGACATGATGAAAATA
CTACACTCGAGATCGTTTTGACTTATAGATATATTTCTAAATCAAGATTG
GACAATAAGGCTTTTGAGTTTATTAAGAAATACAGTTTACAGAAACTGAC
ATCAATTCGTATCAAGGAGGCAAAATATGGAAAGACAATTATTGACATGA
CTATGGAGAATTTGGTTTCTTGTACACATTGGGAGATTAAATTGACGCAA
AGCATTATGGAACTGTATAATATCACATATGACCAGTATGATTTGATGCT
AAACTCTGGGAAAAGTATTGCAACTTGTAAATACGTCGAAAACTTGTTTT
TCTTGGGttcaaagtttgaagaaaatgttgagcTTGTATTGGTTTTCTCA
AAACATTCGAGCTTTGATAAAACAGAAGGCTTCTATTTCACGTTGCTTGG
CctaaaaaaacttgttttgaaATCGTTAACTAGAAGTGAAGTATTTGACA
TTAATGAATACAGAACTTTATCTTCCATTGGAACAAATATACAGATACAT
ATGAAGATTCCAAAGCATTTGCAAATTTTCATGCACAAGAAGAGAAAGAT
AAGCAAGAAGGAAAGATTGTCTGATATCTTTTGGTATCATTGCAACGAGG
AGGAAAATGCAGAGGGAACGTTAACCATTAACTTGATCTCAAAACCTCCT
GCGAGTTTAACTGTACGGTTAACCTCTCCATATCCTGCCAGAATCGGATT
GCCAGAGACGCTGGAGATAAAAGAGACTGCAACAATTGCCGAAGCTGAAA
ACTACTTATCGGAACTGATCCAGTATCCTATCACCTTGATGAGACATGAT
AAACTTAGCGTTACAGATATTTGtagaaaagaacaatttttatatgaaat
acCAAGAAGATATGGAGAGCAATTACAATTACTAGTTTTCAGAAGTTTCG
AaattaattttcgattttgttCTAAATGTTGTGAAGAGACTCTCAGGGAC
AAACAAACgttctttgttttgtatcatgaAGCTAAAACCGTGgagaaact
tttaaaagaacatttcaacAGATGGTTGTGTTGTTCTGACACAAAATGGA
GATTATCAAGAGAGAATGCAAAATACATGTCTAAAGATTCTCTTTTGGTT
GATTTGGCTCCTGATGTCATCATAAGCCTTGAAGCTACGTCCAAATCATT
CTTAGCCCTCagaagaatatttaaaaaataatagtcTTCGATTCTTTGGT
TGGTGGTAGCAAAGTGTTGTTCTGGGGATgcgatgaatttgaaaattcat
aaaatttctcAAACGGGCTGATAGCTAtactttttttcattagaaccagt
aaaattttgctgaggctcggctgttcttatttttttgccactttgaacct
caaattgttcttatgttgttatttatagggtgtaattgaggtattttagg
cggtATACTTAATTTTTAccactttgacccctaaattgcttgaaattgga
CCATCACTTGTGGCACGCTAAATACTTTTTAGGACTAAACAAAACTTCGA
TAGTAAGATGTAtatctgaaaacttttttt Coding sequence (CDS) from alignment at sc0000006_pilon:2703417..2705646+ >MSTRG.1391.1.p1 ID=MSTRG.1391.1.p1|Name=MSTRG.1391.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1416bp|location=Sequence derived from alignment at sc0000006_pilon:2703417..2705646+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGCTTATGTAGAGAACTTTCATATGTTAGTATACTCAACACTCATGG
TGAAGAAATTCTCCAATGGTTTCCAAAGAATGGCAATCGCACTGTGGCAg
gattgaaatatttcattgagATAAATACGTGCATTCCATTTAACAATCAA
GTTCTTTATTACCGTAACCGCGAGCATATGGATTTGGTATCAATCGGGTC
TTATCTCGAATGGCTATTTAGACATGATGAAAATACTACACTCGAGATCG
TTTTGACTTATAGATATATTTCTAAATCAAGATTGGACAATAAGGCTTTT
GAGTTTATTAAGAAATACAGTTTACAGAAACTGACATCAATTCGTATCAA
GGAGGCAAAATATGGAAAGACAATTATTGACATGACTATGGAGAATTTGG
TTTCTTGTACACATTGGGAGATTAAATTGACGCAAAGCATTATGGAACTG
TATAATATCACATATGACCAGTATGATTTGATGCTAAACTCTGGGAAAAG
TATTGCAACTTGTAAATACGTCGAAAACTTGTTTTTCTTGGGttcaaagt
ttgaagaaaatgttgagcTTGTATTGGTTTTCTCAAAACATTCGAGCTTT
GATAAAACAGAAGGCTTCTATTTCACGTTGCTTGGCctaaaaaaacttgt
tttgaaATCGTTAACTAGAAGTGAAGTATTTGACATTAATGAATACAGAA
CTTTATCTTCCATTGGAACAAATATACAGATACATATGAAGATTCCAAAG
CATTTGCAAATTTTCATGCACAAGAAGAGAAAGATAAGCAAGAAGGAAAG
ATTGTCTGATATCTTTTGGTATCATTGCAACGAGGAGGAAAATGCAGAGG
GAACGTTAACCATTAACTTGATCTCAAAACCTCCTGCGAGTTTAACTGTA
CGGTTAACCTCTCCATATCCTGCCAGAATCGGATTGCCAGAGACGCTGGA
GATAAAAGAGACTGCAACAATTGCCGAAGCTGAAAACTACTTATCGGAAC
TGATCCAGTATCCTATCACCTTGATGAGACATGATAAACTTAGCGTTACA
GATATTTGtagaaaagaacaatttttatatgaaatacCAAGAAGATATGG
AGAGCAATTACAATTACTAGTTTTCAGAAGTTTCGAaattaattttcgat
tttgttCTAAATGTTGTGAAGAGACTCTCAGGGACAAACAAACgttcttt
gttttgtatcatgaAGCTAAAACCGTGgagaaacttttaaaagaacattt
caacAGATGGTTGTGTTGTTCTGACACAAAATGGAGATTATCAAGAGAGA
ATGCAAAATACATGTCTAAAGATTCTCTTTTGGTTGATTTGGCTCCTGAT
GTCATCATAAGCCTTGAAGCTACGTCCAAATCATTCTTAGCCCTCagaag
aatatttaaaaaataa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:2703417..2705646 + |
|
