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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000113_pilon:615449..619748+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13894.2.p2 ID=MSTRG.13894.2.p2|Name=MSTRG.13894.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4300bp|location=Sequence derived from alignment at sc0000113_pilon:615449..619748+ (Clytia hemisphaerica_ch_hm2_pilon)
TACAGTTTTCCATCCAATGATGTTTCCTAAAGTTTTTATCCACaagaaat
aaaaatgtcataaaataaTATATGTACAGAACTAAATAAAACATGGTACA
ATGTTGAATGTGTAAGCCTAATATAAAATCACTGTGTTACAAATTTCCTG
GTGCGTGGAAAAATCACGCacataaataaattttatttatctGTCCCATA
AATTGAACTAATGATTTTCCTTTTTGGCATTAAAAACACTCTACattaaa
tatatgttttatacGTTTAGAAACTCAGTCCTAgtttaaagaaaatataa
tataaaaagaagaactttcttCATGATAAAAGCCtaaattttgatcattt
tttctttcagttcatTATTTTCTTGCAATAATCTCTGATTTTCATCTTGT
AATTGTTGAACATCTTGCAATCTAttgtcctttaatttgacctcTCTTTC
AAGGTTTTCAATACGTTGTTCTAGATCATAACAATTCTTTATCAAGTCTT
CTTTTGTGTAAGAGTTTAGAGTATCAATATGAACACGTTCGTAAAATTCA
TCAAAGTCTTTCTCGAAATATTCATCACTTGAAGCACATGAGCTACAACT
TTCATCATTGTCATCATTGTCCTTTCCATTTCCCTCTGCACTGCTAGTAC
TAGAATGATGATGGTGttgttggaaattttcatccccaggATCGTGCTCC
TCCATCAAAAATTGTGTGGTGTTGTAAGGTGCAATTGGGCGACCTTTTTG
AGCAACAAGTTCCTCCCTTTTTCGAACAGCTTTGACTGCATCTTTTTCGT
CAAGCTTTCTCTTCTCATCCCATGTGAGTTTGTTGTAGGGTTTGTACTTG
TTCCTGTGCTTCTTCTTGGCTCCTCTTCGATGCTTCTTCTTTGGTTTGCC
TTTGACTTGTGAACTGTTTCCATTCTGCTGGCGCTCgctgttttgttgtt
gtttttttcgagGACTCTGTTCCAGACCTCCATTCGGAGACGCATCTTCG
ACGTTTTCTGTCTTTAATGGaccatttttcaacttttctggGGACTCCAG
ATTAGAAATTTCAACTTCCATATCAAATTAGTAGCGAATAAAGtttaaaa
tctcaatttttcttctttaaaaagcaaaaaaagtaatGTATTCACGATTT
TAAAATAACGACGTCTGGCTTTCGACCTTGCTAAACATTGACTGACTTTT
CGACGCAAAGCTTCCCAAACTTTGGATGAGGTTTTGGTCACGTGATAAAA
GCAATCATTTTGATTGGCTTTATATGTTGTTTAACAATAGCGCACGACCT
TGAACCTCTGGATAGCGGTCTTTCTTTTAACAAACATGGTGGACTTTTTT
ATAAACAACAAGAGGTAAGCAGTAAGGTAAAACGTTTGAAAATTGTTAAG
TTTGCATTATgaaccttcaaaatttatcacttTCTTTTCGAAATCTGAAA
GCTCTGTCACTAAGTAAATAGTATTTTATCCAATTCCAAATTGAATTATC
CTATTTATTCCGATATCACAAGCCATTCcagttcttttcttttttgtctt
ctttcctctccttgaattctttttttgcagtcctgtcttttccATATATT
TTCAGCCTGAATATCCTATGGTCTAAAGTAAAGAAtgattacaaaaatgt
tttacttaagaccaaaatttgggaaagtCTTGTGTTGGGGTAGAgggggg
ggTGCCCCCAGCCAGGTGCACGGAACGCCaaactttttcacttttctcac
ttggtttttacataaatcctttttgaccatctcgtagacaagcttgaagt
ccttcgttctgttttttcactttatttgaaagcttccttcttggaataat
aagtcGTTAAAGCGCTAGCGCTAtggaccttttttcaaagaggcaaccct
gttgaataattatgtagtccagccatacaaacaatgatacagcaatgcat
aattactgtttcatgcatattgtaataattatgcatgggtgtatcattgt
ttttctgctggactacataattattcaacagggtggcctctttgaaaaaa
ggtctattcggaCCCAGTCTGTGAACAAGGCAGGAACCAGTGCACGAACA
ctcttttgaaagaaagaattaGAGCTCCACTCGCAggtactgtcaactgc
tctaaagtggtcctaaatccgacagccctaaGCTAAATCCAATGGGCAGT
GTGGCTAGAATCCTTCAGATCCTTgtttagaaaaagctatacctgtttac
ttttttcttgccagattcaacaagccatcaaccaacaaaattataCCACT
GACATCTAAAAATTCACACGACCTTTCCACAGTGGAGTAAGACGAAGTGT
cttaaattatctgccattatgaagatgttccggaattaaccaatcgggtt
tacaATCAAAATTCCTCTGGGGGTTAGCAAGCCTGGAAATGTAAAGTTAC
TGTTTTTCCGGGAGTAAAAtgtataaaagaaaattgaaacggtttatttt
tttcttcattatatttaagtttccattatcaaaattctagaaatgcgaat
ttgtagaccatattagaaaatgtttaccgtcaactgctccaacttgggac
tatcttacgcaacatgagacggccattccaccaccatttcaccgaacttc
caaagtcatttgatttgagtttaatgaaccgcatatagaaaatacacgat
ttctctttcgcaccgagtgggcttttaaatcaaaatatgaaaaaaatccg
tagtagAACACGCGCGAGTGTccggaacgaagaagaccaaattagtggca
aaacgatggagcgtttgacatcactcgcacgccaagttacacactcgcta
tttgGTAATCCCATTGGGCGGTAGCCGGTTAAGCGacaggcgttctctaa
ttctccattcggcgtccggtcattttgaatgaaaacaaaacttaaaaagg
gcgcgctatcagtgaaagttatcaaaacaaatttgttgtcaaagagattt
aacagtaagggAAAATACAGCTAGAATGCTCTTCACTTCATCCATAACAT
ATTACAGAAATACATTGAAGAGCCTGGGACAATATACAGCCTTGGTGGAC
ACCAACATTGACTGCAAACTATTCATTTAATTTCCCTACAATTTGAAGAG
CACATTCAGTTTGGTCATACATATTCTCTATGATGTTCACAATATTTCGA
TTGACACCGATTGATCTTAGTATTTTCCAAAATGCTTTCCTCCAGACTGT
ATCGAAAGCAGCTTTGAAGTCTATGAAGTGAAAATTTAAAGGCTTTTTCA
ATCAACTGCCTAACAATGAAAACAACTGACATATAGACAGAAATTACAGA
GTCAAACACTACTTCTATAGGGTTTGTTAAAATCAGGTAAATTCAATTAG
CATCTATCCttttttgcatgttattttctttttaatgaaagtaaatcttt
ttaatttattcaGTAGCCATGAAATTATTCAAGCAAGGAGCAGAAGCACG
CCTTTACAAAGCTGACTTTTTGGGTAAGAAAGTCATTATCAAAGAACGTT
TTCAAAAGACATATCGACATCCACAATTAGATTTGAAGCTAACTCAAAAA
AGAacccttcaggaagctagagcAATATTACGATGCAGAAAAGCTGGAAT
AAGTACACCTTTGGTGTATTTCATTGaccataaaaaacatcaaattttta
tgGAGGAAATTCTTGACAGTTTGACACTCCGTGAAAGAATAGACACACTT
TTAAAGCTTAACACAGATGAAGCTAAATCACAACTTGTGTCAATGGCAAA
AGCAATAGGAAAGATGATTGCTCATATTCACTCAGTTGACATTATCCATG
GAGATCTTACGACATCCAATATCCTTGTTACTTCCAAGAATGATAAAGAA
GATTATGTTCTTATTGACTTTGGATTAAGTAGTGTTTCCAAATTTTCTGA
AGATATGGGTGTTGATCTTTATGTACTGGAAAGAGCATTTTTAAGCACAC
ATCCAAACACAGAATGGCTCTTTGCTGAAATCTTAGACAGTTACTTTAAA
TGTATTACTGACCCGAAAAGAAACAAAGAGATCATGGAAAAATTAGAAGA
AATTAGAATGCGCGGCCGAAAACGAGTAATGATtggataagttttgatat
aataGtttttttCTGCATTTTGTATATTCATAAGCATCAGAAGATCATTT
CATTATTGTTTGTAATGTGAATGTGTTTAtcattttcaacctttttcttt
tcaatttgtaAAACATTTGTCATTGAtgagtcaatgcaatgacttccgaa
Coding sequence (CDS) from alignment at sc0000113_pilon:615449..619748+ >MSTRG.13894.2.p2 ID=MSTRG.13894.2.p2|Name=MSTRG.13894.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=672bp|location=Sequence derived from alignment at sc0000113_pilon:615449..619748+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATTATTCAAGCAAGGAGCAGAAGCACGCCTTTACAAAGCTGACTT
TTTGGGTAAGAAAGTCATTATCAAAGAACGTTTTCAAAAGACATATCGAC
ATCCACAATTAGATTTGAAGCTAACTCAAAAAAGAacccttcaggaagct
agagcAATATTACGATGCAGAAAAGCTGGAATAAGTACACCTTTGGTGTA
TTTCATTGaccataaaaaacatcaaatttttatgGAGGAAATTCTTGACA
GTTTGACACTCCGTGAAAGAATAGACACACTTTTAAAGCTTAACACAGAT
GAAGCTAAATCACAACTTGTGTCAATGGCAAAAGCAATAGGAAAGATGAT
TGCTCATATTCACTCAGTTGACATTATCCATGGAGATCTTACGACATCCA
ATATCCTTGTTACTTCCAAGAATGATAAAGAAGATTATGTTCTTATTGAC
TTTGGATTAAGTAGTGTTTCCAAATTTTCTGAAGATATGGGTGTTGATCT
TTATGTACTGGAAAGAGCATTTTTAAGCACACATCCAAACACAGAATGGC
TCTTTGCTGAAATCTTAGACAGTTACTTTAAATGTATTACTGACCCGAAA
AGAAACAAAGAGATCATGGAAAAATTAGAAGAAATTAGAATGCGCGGCCG
AAAACGAGTAATGATtggataa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000113_pilon | genome | sc0000113_pilon:615449..619748 + |
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