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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000113_pilon:484204..487866+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13883.1.p1 ID=MSTRG.13883.1.p1|Name=MSTRG.13883.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3663bp|location=Sequence derived from alignment at sc0000113_pilon:484204..487866+ (Clytia hemisphaerica_ch_hm2_pilon)
agCATGTTTCATATGGAAAACTGTCATGTAGAAGTATATATGATTAATGA
AAGCTCTATCTTTGCATCTTTGGTATCGATCACTTTCTCTGGTGATTTGT
TCACAAATGAAGATATGGAAACTAACTAAAAATTCATGAAAGAATCATAT
TTTAATGGCATCAAACACATTTTTCTCGTCTGGTTCAGCGAGTACGTTAT
CACCAACTTTGTTATCACCAAACGTTACCAATCTCAACATATCACAACGT
TTCCAACAACCAGACTACATTAAACGAAATTTAACTGAAGAACAATATCA
AATACATGAGCAAAATGAACCAATAGATGGGAATGGAGATAGCCAATCAG
ATGAtgataatgaaaagaaaaacggATTCAAAAATCGATGTTTAGATTGG
ACACACAAACACCTGATTGtttataaaatgttttattttatgttttatgg
GGCTGTTGGTTCTCTTTTTCCATACTTAGCAGTCTTTTACAAACAATTAT
TCTTATCCGCCCAACAAGTTGGTTTCCTCATTGGCGTACGCCCGTTTATT
CAAATGGCAACCGCCCCTTTATGGGGTGCTATTGCAGACACATGTAATGT
GAAGAAAATCATCTTATTGATGTCTATTGCATCTTGGTTGGGTACAAATT
ATAGTATATCTTTAGTCCGTATACCACCTTCCATAGCCTGTGCACAGAAC
GATACAATGGTTCGATTGCCACCACCGGctaaaattacagaccagagtcT
ATCAAATCTGACGCAAACGTACGTAGAAGCGGCTACTAAAAGACGCAAAA
CGAATATTACAAAAACACAGTATATGGTGTACCCTCATTCAAGTGATAAT
AGACCAGGAACAGATTCCAAAATCAACCAATATACGAAAACTCATAAGAT
TGATACATTTCTACAAGATGATAAACTAGAACCAGattctaaaatcaaac
aaaatatgaaaGGTCGCAAAATTGATAGAGTTCTAGAAAAAACACAACAT
TTTATAGTTCAACCTCACTCTAGGCAACGTAGAAGCGACCACTTAGTAAC
AGGAATCAATACTCAGCTTTCGACTGATGGCAATAAAACGATAAATCAGC
CTCTTCGGACTACCAGTCAGAAGATATCAGAAGCACAACGTTTATTAGCA
GCTgatgaaattgaagaagaatttGATACGTTGAACACTGATGGTGATTA
TCCATGGCCTTTAGGTAAGTGAATTGTcaattcgaaattcaaaaagaCCA
TTTGGAAAGCCTTCAATAGATAAGTGCGCTCTGGaaaaaaaGTCCTCTCC
TCTTGCTACAGGTTGACTTTTAGAGTATAGAGGACAGAGAttttattttg
tgacttttccatttccatttccatttccaAGTTTCAGATATTCCCATCGC
CGTACCTTTTTGTATGCCGCTAAAGTGTTATCGGTGTCTTGAAAATAAAT
ACAATAAAATACAACAAATCAAAAGCGTGTTCTTAATTAGTAATCGCTGG
CAAGTATTGTTTGAAGCTCAATGGACAAAATCCAATTCTTGTAGGGTTTA
AAACTGTAAAAAACTACATTAACATTATTTTTGCGGAACTTAACAGGACT
TTTAAAGGGACATAAAAGGAGTAAAATGTAAACATTGCGCGAAACCACAT
GTCATTAAAAAGAACAATTAAAATCACGTGTCCAAAACAAACTTGTAAAA
CAATTGAAAAATCAAAATTAGCCATATTTGGTTTGATTTTTTATTtttga
catgtgacatttgttttgatttttatccgctgcatacagtttgtttacaa
atttcacaagtactgttatgtccctttaagctcCTTCTCACTCCTTACAG
TAAAAAATAATCCAGCTGAAATATTTTGTATCGtttttttATAGAATCTG
ACGAGAGCGTAGAACAAAAAGAAGTATCCAAAAACAACGCACATAATATC
TTCATTGTGTTAATCATTATAACAGTGTTAGGAACAACTTTAGCGTCACC
CACCGCCACATTGGCTGATACAGCAACACTGGAAAATCTGAGTAAGTAAA
CAAACTGAGTCAATTCTAAAGACTTGGTTTAAGGTTTCTATAGTCTCTAG
CAGATGTTACGCGGGAATCAAGGAAAATTGACGGAAATAGATACTTCGAG
TCCAAGAGTTTCTGTTCTTCATTTCACTTTTTTATCTATATTGTCTATTG
TCTACCTTCAAAGCGAAATTTGGAGGCCTGGAAACTATTGCCTTGTTTAG
GTCAACTCCTTTAAGGAATTTTCCTCTAGTGCCTGAAAAGTTCATGCCTT
TTAGCTCAACTcctttaaaaaactttcttttagtGTCTGAAAAGTTCATG
CCTATTGACTAAACTCctttcagaaattttcttttagtactcatggcaat
caattttgatttaccttttttttAGATGATCAGATGTACAACTATGGATT
TCAGCGTGTGTGGGGAGCTTTAGGCTGGGGTCTTGGCGCTTTCATTGTGG
GCCTGGTTGTCAGCTATATTCAACGTATCGATTGCCGTAAAGGAAACCAC
GTAGATTACATCTTATCTTTCTACGTATACGCCGTAATGATGGGCTTAGC
ATTCATATGTGCTTTATTTTTCAAGTTTAGTTTAGTAGAGCAAGACCAAC
CATACAGCCAATCATTGGGTGAAGCCATATACCTATTCTGTGACTGCCAA
CATGTTAGTTTTGTTATAACCTTACTTTGTTCAGGAGCTTCATTAGGCTT
TGTACACACTTTCTTATTTTGGCATTTACACGATCTTGGTGCGACGCAAA
CGCTTTTTAGTATGCTAACAGCTGTTCAATGTTTATCAGAAGTTATAATG
TACTTTGTTTCGGGCTACCTGTTATTGAAAATTGGATATGATTACGTATT
GTATATTGGTTTGACTTCGAATATTTTGAGATTAATTGCATATTCGTGTA
TCCGTGAACCGTTACTATCATTACCGATTGAGATTTTACAAGGAGTTTCC
TCAGCAGCGATATGGACTTCAGCTGTCTGTTATATTGGACTAATACCTGG
TGCACCAGTAACACTCCAGGCTCTCTTACATGCTATCTATTGGGGTTTAG
GGCACGGGGGCGGTGGTATTTTAGGTGGCGTATTAGTCACTTATATAGGA
TCCAATATTACTTTTACAATCTATGCTATATTGAGTAGCGTTAATTTGGT
ATATTTATTATTACTGAAGTATAGAAGTAAATTGATGGAACTTCTTGGGA
ATTATACCTATGTTGAGAATATACCAGCTGGAACTTATATTTTGACTTCC
ATGTCTCAGCGTGCGACATCGGATGAAAGTAATAGATGATTGTAAATATT
ACAACGATatagtcttttttataagaaccagtaaatatttaaattaggct
cggctgttcttaTttttttgactcTTTTAGCCACGATGTGTTCTTATTCC
GTTTTTCATCTATAGGGTGAGATTGAGGAATTTTAGGATACCACTGGATA
CCCCCTTAAAACCATATTCATAGGTAGCTTAGacccaccaaaaaaagttt
tagccCTTACCGTTTTATCTATCAGGATATAGGGGGTACCtctttttttg
tagattttAaagGGTATTCAATTGGTATGTACCCAATCCTTTTCCCCTTT
GGCGATTTTGaac Coding sequence (CDS) from alignment at sc0000113_pilon:484204..487866+ >MSTRG.13883.1.p1 ID=MSTRG.13883.1.p1|Name=MSTRG.13883.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6363bp|location=Sequence derived from alignment at sc0000113_pilon:484204..487866+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATCAAACACATTTTTCTCGTCTGGTTCAGCGAGTACGTTATCACC
AACTTTGTTATCACCAAACGTTACCAATCTCAACATATCACAACGTTTCC
AACAACCAGACTACATTAAACGAAATTTAACTGAAGAACAATATCAAATA
CATGAGCAAAATGAACCAATAGATGGGAATGGAGATAGCCAATCAGATGA
tgataatgaaaagaaaaacggATTCAAAAATCGATGTTTAGATTGGACAC
ACAAACACCTGATTGtttataaaatgttttattttatgttttatggGGCT
GTTGGTTCTCTTTTTCCATACTTAGCAGTCTTTTACAAACAATTATTCTT
ATCCGCCCAACAAGTTGGTTTCCTCATTGGCGTACGCCCGTTTATTCAAA
TGGCAACCGCCCCTTTATGGGGTGCTATTGCAGACACATGTAATGTGAAG
AAAATCATCTTATTGATGTCTATTGCATCTTGGTTGGGTACAAATTATAG
TATATCTTTAGTCCGTATACCACCTTCCATAGCCTGTGCACAGAACGATA
CAATGGTTCGATTGCCACCACCGGctaaaattacagaccagagtcTATCA
AATCTGACGCAAACGTACGTAGAAGCGGCTACTAAAAGACGCAAAACGAA
TATTACAAAAACACAGTATATGGTGTACCCTCATTCAAGTGATAATAGAC
CAGGAACAGATTCCAAAATCAACCAATATACGAAAACTCATAAGATTGAT
ACATTTCTACAAGATGATAAACTAGAACCAGattctaaaatcaaacaaaa
tatgaaaGGTCGCAAAATTGATAGAGTTCTAGAAAAAACACAACATTTTA
TAGTTCAACCTCACTCTAGGCAACGTAGAAGCGACCACTTAGTAACAGGA
ATCAATACTCAGCTTTCGACTGATGGCAATAAAACGATAAATCAGCCTCT
TCGGACTACCAGTCAGAAGATATCAGAAGCACAACGTTTATTAGCAGCTg
atgaaattgaagaagaatttGATACGTTGAACACTGATGGTGATTATCCA
TGGCCTTTAGAATCTGACGAGAGCGTAGAACAAAAAGAAGTATCCAAAAA
CAACGCACATAATATCTTCATTGTGTTAATCATTATAACAGTGTTAGGAA
CAACTTTAGCGTCACCCACCGCCACATTGGCTGATACAGCAACACTGGAA
AATCTGAATGATCAGATGTACAACTATGGATTTCAGCGTGTGTGGGGAGC
TTTAGGCTGGGGTCTTGGCGCTTTCATTGTGGGCCTGGTTGTCAGCTATA
TTCAACGTATCGATTGCCGTAAAGGAAACCACGTAGATTACATCTTATCT
TTCTACGTATACGCCGTAATGATGGGCTTAGCATTCATATGTGCTTTATT
TTTCAAGTTTAGTTTAGTAGAGCAAGACCAACCATACAGCCAATCATTGG
GTGAAGCCATATACCTATTCTGTGACTGCCAACATGTTAGTTTTGTTATA
ACCTTACTTTGTTCAGGAGCTTCATTAGGCTTTGTACACACTTTCTTATT
TTGGCATTTACACGATCTTGGTGCGACGCAAACGCTTTTTAGTATGCTAA
CAGCTGTTCAATGTTTATCAGAAGTTATAATGTACTTTGTTTCGGGCTAC
CTGTTATTGAAAATTGGATATGATTACGTATTGTATATTGGTTTGACTTC
GAATATTTTGAGATTAATTGCATATTCGTGTATCCGTGAACCGTTACTAT
CATTACCGATTGAGATTTTACAAGGAGTTTCCTCAGCAGCGATATGGACT
TCAGCTGTCTGTTATATTGGACTAATACCTGGTGCACCAGTAACACTCCA
GGCTCTCTTACATGCTATCTATTGGGGTTTAGGGCACGGGGGCGGTGGTA
TTTTAGGTGGCGTATTAGTCACTTATATAGGATCCAATATTACTTTTACA
ATCTATGCTATATTGAGTAGCGTTAATTTGGTATATTTATTATTACTGAA
GTATAGAAGTAAATTGATGGAACTTCTTGGGAATTATACCTATGTTGAGA
ATATACCAGCTGGAACTTATATTTTGACTTCCATGTCTCAGCGTGCGACA
TCGGATGAAAGTAATAGATGAATGGCATCAAACACATTTTTCTCGTCTGG
TTCAGCGAGTACGTTATCACCAACTTTGTTATCACCAAACGTTACCAATC
TCAACATATCACAACGTTTCCAACAACCAGACTACATTAAACGAAATTTA
ACTGAAGAACAATATCAAATACATGAGCAAAATGAACCAATAGATGGGAA
TGGAGATAGCCAATCAGATGAtgataatgaaaagaaaaacggATTCAAAA
ATCGATGTTTAGATTGGACACACAAACACCTGATTGtttataaaatgttt
tattttatgttttatggGGCTGTTGGTTCTCTTTTTCCATACTTAGCAGT
CTTTTACAAACAATTATTCTTATCCGCCCAACAAGTTGGTTTCCTCATTG
GCGTACGCCCGTTTATTCAAATGGCAACCGCCCCTTTATGGGGTGCTATT
GCAGACACATGTAATGTGAAGAAAATCATCTTATTGATGTCTATTGCATC
TTGGTTGGGTACAAATTATAGTATATCTTTAGTCCGTATACCACCTTCCA
TAGCCTGTGCACAGAACGATACAATGGTTCGATTGCCACCACCGGctaaa
attacagaccagagtcTATCAAATCTGACGCAAACGTACGTAGAAGCGGC
TACTAAAAGACGCAAAACGAATATTACAAAAACACAGTATATGGTGTACC
CTCATTCAAGTGATAATAGACCAGGAACAGATTCCAAAATCAACCAATAT
ACGAAAACTCATAAGATTGATACATTTCTACAAGATGATAAACTAGAACC
AGattctaaaatcaaacaaaatatgaaaGGTCGCAAAATTGATAGAGTTC
TAGAAAAAACACAACATTTTATAGTTCAACCTCACTCTAGGCAACGTAGA
AGCGACCACTTAGTAACAGGAATCAATACTCAGCTTTCGACTGATGGCAA
TAAAACGATAAATCAGCCTCTTCGGACTACCAGTCAGAAGATATCAGAAG
CACAACGTTTATTAGCAGCTgatgaaattgaagaagaatttGATACGTTG
AACACTGATGGTGATTATCCATGGCCTTTAGAATCTGACGAGAGCGTAGA
ACAAAAAGAAGTATCCAAAAACAACGCACATAATATCTTCATTGTGTTAA
TCATTATAACAGTGTTAGGAACAACTTTAGCGTCACCCACCGCCACATTG
GCTGATACAGCAACACTGGAAAATCTGAATGATCAGATGTACAACTATGG
ATTTCAGCGTGTGTGGGGAGCTTTAGGCTGGGGTCTTGGCGCTTTCATTG
TGGGCCTGGTTGTCAGCTATATTCAACGTATCGATTGCCGTAAAGGAAAC
CACGTAGATTACATCTTATCTTTCTACGTATACGCCGTAATGATGGGCTT
AGCATTCATATGTGCTTTATTTTTCAAGTTTAGTTTAGTAGAGCAAGACC
AACCATACAGCCAATCATTGGGTGAAGCCATATACCTATTCTGTGACTGC
CAACATGTTAGTTTTGTTATAACCTTACTTTGTTCAGGAGCTTCATTAGG
CTTTGTACACACTTTCTTATTTTGGCATTTACACGATCTTGGTGCGACGC
AAACGCTTTTTAGTATGCTAACAGCTGTTCAATGTTTATCAGAAGTTATA
ATGTACTTTGTTTCGGGCTACCTGTTATTGAAAATTGGATATGATTACGT
ATTGTATATTGGTTTGACTTCGAATATTTTGAGATTAATTGCATATTCGT
GTATCCGTGAACCGTTACTATCATTACCGATTGAGATTTTACAAGGAGTT
TCCTCAGCAGCGATATGGACTTCAGCTGTCTGTTATATTGGACTAATACC
TGGTGCACCAGTAACACTCCAGGCTCTCTTACATGCTATCTATTGGGGTT
TAGGGCACGGGGGCGGTGGTATTTTAGGTGGCGTATTAGTCACTTATATA
GGATCCAATATTACTTTTACAATCTATGCTATATTGAGTAGCGTTAATTT
GGTATATTTATTATTACTGAAGTATAGAAGTAAATTGATGGAACTTCTTG
GGAATTATACCTATGTTGAGAATATACCAGCTGGAACTTATATTTTGACT
TCCATGTCTCAGCGTGCGACATCGGATGAAAGTAATAGATGAATGGCATC
AAACACATTTTTCTCGTCTGGTTCAGCGAGTACGTTATCACCAACTTTGT
TATCACCAAACGTTACCAATCTCAACATATCACAACGTTTCCAACAACCA
GACTACATTAAACGAAATTTAACTGAAGAACAATATCAAATACATGAGCA
AAATGAACCAATAGATGGGAATGGAGATAGCCAATCAGATGAtgataatg
aaaagaaaaacggATTCAAAAATCGATGTTTAGATTGGACACACAAACAC
CTGATTGtttataaaatgttttattttatgttttatggGGCTGTTGGTTC
TCTTTTTCCATACTTAGCAGTCTTTTACAAACAATTATTCTTATCCGCCC
AACAAGTTGGTTTCCTCATTGGCGTACGCCCGTTTATTCAAATGGCAACC
GCCCCTTTATGGGGTGCTATTGCAGACACATGTAATGTGAAGAAAATCAT
CTTATTGATGTCTATTGCATCTTGGTTGGGTACAAATTATAGTATATCTT
TAGTCCGTATACCACCTTCCATAGCCTGTGCACAGAACGATACAATGGTT
CGATTGCCACCACCGGctaaaattacagaccagagtcTATCAAATCTGAC
GCAAACGTACGTAGAAGCGGCTACTAAAAGACGCAAAACGAATATTACAA
AAACACAGTATATGGTGTACCCTCATTCAAGTGATAATAGACCAGGAACA
GATTCCAAAATCAACCAATATACGAAAACTCATAAGATTGATACATTTCT
ACAAGATGATAAACTAGAACCAGattctaaaatcaaacaaaatatgaaaG
GTCGCAAAATTGATAGAGTTCTAGAAAAAACACAACATTTTATAGTTCAA
CCTCACTCTAGGCAACGTAGAAGCGACCACTTAGTAACAGGAATCAATAC
TCAGCTTTCGACTGATGGCAATAAAACGATAAATCAGCCTCTTCGGACTA
CCAGTCAGAAGATATCAGAAGCACAACGTTTATTAGCAGCTgatgaaatt
gaagaagaatttGATACGTTGAACACTGATGGTGATTATCCATGGCCTTT
AGAATCTGACGAGAGCGTAGAACAAAAAGAAGTATCCAAAAACAACGCAC
ATAATATCTTCATTGTGTTAATCATTATAACAGTGTTAGGAACAACTTTA
GCGTCACCCACCGCCACATTGGCTGATACAGCAACACTGGAAAATCTGAA
TGATCAGATGTACAACTATGGATTTCAGCGTGTGTGGGGAGCTTTAGGCT
GGGGTCTTGGCGCTTTCATTGTGGGCCTGGTTGTCAGCTATATTCAACGT
ATCGATTGCCGTAAAGGAAACCACGTAGATTACATCTTATCTTTCTACGT
ATACGCCGTAATGATGGGCTTAGCATTCATATGTGCTTTATTTTTCAAGT
TTAGTTTAGTAGAGCAAGACCAACCATACAGCCAATCATTGGGTGAAGCC
ATATACCTATTCTGTGACTGCCAACATGTTAGTTTTGTTATAACCTTACT
TTGTTCAGGAGCTTCATTAGGCTTTGTACACACTTTCTTATTTTGGCATT
TACACGATCTTGGTGCGACGCAAACGCTTTTTAGTATGCTAACAGCTGTT
CAATGTTTATCAGAAGTTATAATGTACTTTGTTTCGGGCTACCTGTTATT
GAAAATTGGATATGATTACGTATTGTATATTGGTTTGACTTCGAATATTT
TGAGATTAATTGCATATTCGTGTATCCGTGAACCGTTACTATCATTACCG
ATTGAGATTTTACAAGGAGTTTCCTCAGCAGCGATATGGACTTCAGCTGT
CTGTTATATTGGACTAATACCTGGTGCACCAGTAACACTCCAGGCTCTCT
TACATGCTATCTATTGGGGTTTAGGGCACGGGGGCGGTGGTATTTTAGGT
GGCGTATTAGTCACTTATATAGGATCCAATATTACTTTTACAATCTATGC
TATATTGAGTAGCGTTAATTTGGTATATTTATTATTACTGAAGTATAGAA
GTAAATTGATGGAACTTCTTGGGAATTATACCTATGTTGAGAATATACCA
GCTGGAACTTATATTTTGACTTCCATGTCTCAGCGTGCGACATCGGATGA
AAGTAATAGATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000113_pilon | genome | sc0000113_pilon:484204..487866 + |
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