|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000113_pilon:440937..443379+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13878.2.p1 ID=MSTRG.13878.2.p1|Name=MSTRG.13878.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2443bp|location=Sequence derived from alignment at sc0000113_pilon:440937..443379+ (Clytia hemisphaerica_ch_hm2_pilon)
aacataaaaacaaaacaagatggttGCTTACTGGAGACAAGCTGGCTTGA
ACTACTTGCAATTTTCACGTCTGGCGTCACAAACATTACGAAAGTGCTTG
AAACCTGAATTCCAAACTGAAGCTGTGATGCAAAAACAATCTGAATTGAA
AATGATCAAATGGGAAGGTGGTAAACCAACTGGAGAGACCAAGTCAATTA
AACTCTAAATTAAAAGACTAACTAAAATGGTTGAGTaggaatttttttat
tgtatacatcattttgaaaaagacatgactaaaaaaaattgctgaaaata
tattttagttttttttttgcattcctAAATATTCCCCAGAAGAATCTGTT
GTGCATTCATttacttaaaatttcaaaaagctcCTTGTCAAAGTATATTT
GAAGTATAGTATCTTTTAGAATTTGAACTAAGCTTTTATCAAACCTCCTA
ATATCCATTAATCTAAGGGTATCTAATGAAACTTCAGTATAACACATTGT
TTAGTATAGTCTAGTCTCTGATGAGCAaagtactttttttcttttttttt
tggttttagaaAGTAAATGAAATAATTAACTTACTAGATTGGACCCATCC
TTGAGTAGGCTGAAATATTAAAAGTCCACAATGGAAAACAATCTTGCTAC
TACAACTTTTGAGGAATGTTATTCAAGCTTTGAAGGCTTACCCAGCAAAC
TCAACGAGGTTTACATCAGCAAAAGTGAACGCATCAATCAGTTGGTGATA
CTTTTCCCTGGTGATGTTCAGGTAATTGATTCAAAGTTACCCTAAGGGGA
TTAATTATGGCAAAACCtatattgacctctatgaaagaAACGGAAATTAA
AACTGCCAAATTTGCTAGAATTACGAAATTAGTTCTCCCCACCATTAAAA
TTGCCTTAATATGATAAATATTGCACTTTTCAATAATCAGGAAAATGTTT
CTAGCCCTACTTGTTATAAATTGTTTTCAGTTTTGAGGAACTATAACCCA
TGATCACTACCACAAAGCAAATATTTAAATCcccaggttttttttaatcc
ttTTTCACTTTCAAGGATCACTAAGTTTCTTTACTTTCTCACTTTGTCAC
AGGAATGTTATAAAGACATGATGTTAAGACGAGATACAAGATACAAAGAA
TTTTGTTACGAAAATTGTACTAAATGGTTACACCAAGTTTTTAATGATAG
TTGTATTTTCGTTGTCAAGCCATCAAGAATGCACCTTCACACGTTTGCTT
GTTATGAACACTTCTTGGACACTAACGATGTGGGTATGCCAAACTATAAA
ACGGAAGATAAGCCAAAGGCATGGTTACACTTGAGAGCGCTCCTTCAAAG
TTGCACTTCGAAATGTGAGTATAGTCTGGTATAATTCATCTTTTTATCAT
TTCAGTAGGGCCTATATCAGCctatataaataaaaatgttcatttaattt
gcaaaagaaccttgaaataggctcttccagaaaatgttcataCACCCCAG
GTGGAGGATATCCTTGTCCGGGGTagcgaaaatcatcaaaatttgactgg
ggggtaaatttgctctgtctgGGGATTGTctggggggtcaactgatgctt
gtccggggagtaaaacctgttgtccgggggctaaaagtcactttgtccgg
gggtaaatcagtgaaaattgttatatcctacAccccccccATATAgaaat
attttctggaagagcccaatcttgGAATAAGTTTCATCGAAGGGAAATTG
GTGACTCTGTCTTATCCTATCATTCTGCTGTGTGGTTTTAATTTGACTGA
TTTCAAACTTTATCTTAAATCATAGATGATGCTGACAAAACGTGGAATGA
CAAACCAATATCACTTGTTTCTTTCAGTAAAGGCTGTATTGTTTTGAATC
AGTTGGTTTTAGAATTACCATTATTAGTTGAAACACAAAAACAGTCTCTT
TTGACCAACATTCAAACGTTTTGTTGGTTGGATGGTGGTGTACCAGGAAA
CAGTGGAGCGTATCCACGTAATGAAAAATGTATTGAACTTTTATCAAAAC
ATGTTCCAAACATTGAGGTTCATACCACGCCCTATCAGATGAAAGACCCT
TTACGTGTTTGgattttaaaagagaaaaaacgtTTTGTACAGCTCTTGAA
GAAATATAAAGCCGGATTGATAGACTGCTCGTATTTTGAAAATGGCGTAC
CAGATTTAAATATGCATTTTAATTTGATACATAGTTTTCGTAGATAGTAT
ATTTTGTTATATTGGGGTGGGAATCAATATTTTAACTTGTAAATATAGTC
TTCGAAAGTTAGAAACAATTCTGGTCATCTGTGAAACCTGATCAGACAAT
TAGAATATAGTTCCTGTGATCACATAACTTAAAACATTCATAATTAAAGC
TTTTGATGTTTCCCTTTTCTGTTGCCCACTCTTCTCTATTGAG Coding sequence (CDS) from alignment at sc0000113_pilon:440937..443379+ >MSTRG.13878.2.p1 ID=MSTRG.13878.2.p1|Name=MSTRG.13878.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2475bp|location=Sequence derived from alignment at sc0000113_pilon:440937..443379+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAAACAATCTTGCTACTACAACTTTTGAGGAATGTTATTCAAGCTT
TGAAGGCTTACCCAGCAAACTCAACGAGGTTTACATCAGCAAAAGTGAAC
GCATCAATCAGTTGGTGATACTTTTCCCTGGTGATGTTCAGGAATGTTAT
AAAGACATGATGTTAAGACGAGATACAAGATACAAAGAATTTTGTTACGA
AAATTGTACTAAATGGTTACACCAAGTTTTTAATGATAGTTGTATTTTCG
TTGTCAAGCCATCAAGAATGCACCTTCACACGTTTGCTTGTTATGAACAC
TTCTTGGACACTAACGATGTGGGTATGCCAAACTATAAAACGGAAGATAA
GCCAAAGGCATGGTTACACTTGAGAGCGCTCCTTCAAAGTTGCACTTCGA
AATATGATGCTGACAAAACGTGGAATGACAAACCAATATCACTTGTTTCT
TTCAGTAAAGGCTGTATTGTTTTGAATCAGTTGGTTTTAGAATTACCATT
ATTAGTTGAAACACAAAAACAGTCTCTTTTGACCAACATTCAAACGTTTT
GTTGGTTGGATGGTGGTGTACCAGGAAACAGTGGAGCGTATCCACGTAAT
GAAAAATGTATTGAACTTTTATCAAAACATGTTCCAAACATTGAGGTTCA
TACCACGCCCTATCAGATGAAAGACCCTTTACGTGTTTGgattttaaaag
agaaaaaacgtTTTGTACAGCTCTTGAAGAAATATAAAGCCGGATTGATA
GACTGCTCGTATTTTGAAAATGGCGTACCAGATTTAAATATGCATTTTAA
TTTGATACATAGTTTTCGTAGATAGATGGAAAACAATCTTGCTACTACAA
CTTTTGAGGAATGTTATTCAAGCTTTGAAGGCTTACCCAGCAAACTCAAC
GAGGTTTACATCAGCAAAAGTGAACGCATCAATCAGTTGGTGATACTTTT
CCCTGGTGATGTTCAGGAATGTTATAAAGACATGATGTTAAGACGAGATA
CAAGATACAAAGAATTTTGTTACGAAAATTGTACTAAATGGTTACACCAA
GTTTTTAATGATAGTTGTATTTTCGTTGTCAAGCCATCAAGAATGCACCT
TCACACGTTTGCTTGTTATGAACACTTCTTGGACACTAACGATGTGGGTA
TGCCAAACTATAAAACGGAAGATAAGCCAAAGGCATGGTTACACTTGAGA
GCGCTCCTTCAAAGTTGCACTTCGAAATATGATGCTGACAAAACGTGGAA
TGACAAACCAATATCACTTGTTTCTTTCAGTAAAGGCTGTATTGTTTTGA
ATCAGTTGGTTTTAGAATTACCATTATTAGTTGAAACACAAAAACAGTCT
CTTTTGACCAACATTCAAACGTTTTGTTGGTTGGATGGTGGTGTACCAGG
AAACAGTGGAGCGTATCCACGTAATGAAAAATGTATTGAACTTTTATCAA
AACATGTTCCAAACATTGAGGTTCATACCACGCCCTATCAGATGAAAGAC
CCTTTACGTGTTTGgattttaaaagagaaaaaacgtTTTGTACAGCTCTT
GAAGAAATATAAAGCCGGATTGATAGACTGCTCGTATTTTGAAAATGGCG
TACCAGATTTAAATATGCATTTTAATTTGATACATAGTTTTCGTAGATAG
ATGGAAAACAATCTTGCTACTACAACTTTTGAGGAATGTTATTCAAGCTT
TGAAGGCTTACCCAGCAAACTCAACGAGGTTTACATCAGCAAAAGTGAAC
GCATCAATCAGTTGGTGATACTTTTCCCTGGTGATGTTCAGGAATGTTAT
AAAGACATGATGTTAAGACGAGATACAAGATACAAAGAATTTTGTTACGA
AAATTGTACTAAATGGTTACACCAAGTTTTTAATGATAGTTGTATTTTCG
TTGTCAAGCCATCAAGAATGCACCTTCACACGTTTGCTTGTTATGAACAC
TTCTTGGACACTAACGATGTGGGTATGCCAAACTATAAAACGGAAGATAA
GCCAAAGGCATGGTTACACTTGAGAGCGCTCCTTCAAAGTTGCACTTCGA
AATATGATGCTGACAAAACGTGGAATGACAAACCAATATCACTTGTTTCT
TTCAGTAAAGGCTGTATTGTTTTGAATCAGTTGGTTTTAGAATTACCATT
ATTAGTTGAAACACAAAAACAGTCTCTTTTGACCAACATTCAAACGTTTT
GTTGGTTGGATGGTGGTGTACCAGGAAACAGTGGAGCGTATCCACGTAAT
GAAAAATGTATTGAACTTTTATCAAAACATGTTCCAAACATTGAGGTTCA
TACCACGCCCTATCAGATGAAAGACCCTTTACGTGTTTGgattttaaaag
agaaaaaacgtTTTGTACAGCTCTTGAAGAAATATAAAGCCGGATTGATA
GACTGCTCGTATTTTGAAAATGGCGTACCAGATTTAAATATGCATTTTAA
TTTGATACATAGTTTTCGTAGATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000113_pilon | genome | sc0000113_pilon:440937..443379 + |
|
