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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000113_pilon:275523..279959+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13860.1.p1 ID=MSTRG.13860.1.p1|Name=MSTRG.13860.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4437bp|location=Sequence derived from alignment at sc0000113_pilon:275523..279959+ (Clytia hemisphaerica_ch_hm2_pilon)
agaaatggaaaaaaaatgttcATTATCAAAGGCATACTTTTAAATTAatc
taaattttcttttgttatgcTTGAAGTGataaaatagaatttctaaATTG
TGGGATCGTCAGTTCATATTTTGAGCATCAACAAGCAGTGATTCAACCTT
TCACATTGGTTTTGTTGTAATTTAAGCTTGATTCAGGTAAGttttttttC
AGCTATTTTCCTTATGtttatttgaatttaaataCCACCCGTCAGCTCAA
AACCCTTCTTCCCCCGAgagattcattttattttacttgAGAAAGTTTGA
AGATTCCTTTCTAGCTCTTCGCGGGCAATAAACtcaatgaataatttttt
tttcaaatcatttgaGACAGTAAAGACGAAAACGTTAACATCTTTAACGA
CATTAACGCCTTCTGAGTAGCCGTATCCTATGGCAAATTTTACATTATTA
ATGTTGTTTTGAAGTACGTTGtctttgtcttttctttgttgtttcacgta
gcggacttgctcgccagaaaaatattcatgctCAGCAgattcatgttgtt
tcttccgattctgagcgggccgccgcGGTTAAAAATGTTTGCGCGCACCT
AATATTATATCTCTTTTGTTGCTACTTGGTACTTTAtaggaatcaaatca
ataactcttgattgaaggccatatacctttcggtaattagttcttagaaa
gtaaacaaaggatggcgaaaaaaatgagcatatttatttttattataagc
atctactttataagaatcaaatcaatatctcttgattgaaggtaatatgc
ctttcggtaataagttcttacaaagtaaacaaaggatggcgaaaaagatg
agcatgtttatttttattataagcatctactttataagaatcaaatcaat
atctcttgattgaaggcaatatatctttcggtaattagttattagaaagt
aaacaaaggatggtcaaaaagatgagcatatttatttttattataagcat
ctactttataagaatcaaatcaataactcttgattgaagccaacatgcct
ttcggtaattagttattagaaagtaaacaaaggatggccaaaaagatgag
catattcttttattataagcatctactttataagaatcaaatcaataact
cttgattgagggcaatatgcctttcggtaattagttattagaaagtaaag
aAAGGATGTGCTCATCTTTTtaagtgtctactttataagcatcaaatcaa
ttttcagaatttttggcgtttCCACTGTGATAACATATGAGCGATAcctt
ctctttttgagatgtgaacGACCGTCCATcgcatgtcatctcaaaagtaa
agttgaaaccaagctttcttcctccgacttaaattttatcgataaaacga
atttaaaatctacacatgcgttatgttgcttacttagggatatttcgaaa
ggaagctctgcggggcattcttagtgacagctacttgctagttttaATTT
AAACTGCCTTGAAGATTTGCAATATTTAATATCGTTTTGAAAATGATTCA
GTAAGGTCATCGAAAATCGACATCTATTTTACATGACATTGATTTGAAtg
ctcaaatttcaaatttaaagatACACCTATTCAGAATTTGTTATGAACTT
TATATGCTAAATATATTAACTGGATAAGGACTATAACTAGAAATATTAAA
GGGATTTAATAAAAAACTTGCATAAGCCaactttgatttgatttgattta
atgctgtttttttttcagatttttgtcaATATGGTGgatgtgaaaaaaat
tggagTAGTAGCTGCATGTGCATTCGTCTTTATCCTTCTTTCTGCGTCAA
CTGGTGGCGTGGGATGGGTCACATCTGAAAGtaagttaaaaataaaattc
tttctttacattgaaattgaaaatatattaataatttttgttttttataa
gctcGGGTAAgtttatggcatgtcttaaaattaccataatttttagatca
cattagtcgacagaaaatgaccaaacaaatgactgaacatgaagggtagt
atgatgtagtttctagcctgatgtgtaacctaattgttttttctctgatt
ttcgcgaaaaaccgcaaaaactgattattacgtagtaatcgatgacgtca
tcaaaactaaaaattgaatttctcaagaatggtttatccaatcgtcttca
aactttcaccaaagatgtatcgtactaaagtcgatcatttaataaaatga
ttttttcaaaattttgatgacgtcagcagaaaataggatttttcgttttt
cactaatttctgctgacgtcatcaaaatttcgaaatagtttttttttcaa
atgatcgactttagtaagatacatctttggtgaaagtttgaagacaattg
aattaaccattcttgagaaattcaatttttagttttgatgacgtcatcga
ttattacgtaataatcagtttttgcggtttttcgcgaaaatcagcgaaaa
aacaattaggttacacatcaggttagaaactacatcataatacccttcat
gttcagtcaatcgtatggtcattttctgtcgactaatgcgatctaaaaat
tatggtaattttcagtttttgagacatgccataacttacccgagatgaac
aaaatttttaagaccataaggcttcgatagtcaaaatgttaagaacaagt
taagaacattttaaggctttggggactctgaaacacccgatttcttagga
aaacagacaaaaatacCCACGaagtggtgaaaataagaacatgttaagaa
tatttttaggcttaaatctcaaaaagttaagaaaattcaaaggcttcaaa
aattttggattttcttatgaaaaaaacgtgtaatattttagaattttaag
ttttgggCAAGAATGGCGATTCCAGcacttcaaattttttttcattggac
ATTTCGAATTCTGAGGGATTCAGTGGCTGATAGGTCATATTCTCagcttt
attgaaaaaaaaattaagattttgaaTCCTAAGATACTAAGGTTTTTAAA
ATGTACAGGGAACTCGCGGTACAGAACCCATTATAAAATTCGATcataat
atttgataaaaaggcGAGATTGactaggctgcacacatcccctctgataa
gttttgatatatcaaaactaatttagggatgcatgcagcctagaGATTGA
CATGCCCAATATGGATCTGTAAGCCTATCTGTAAGAATGAGAATATCATA
TTTcacgtatttttttataagaacaaactatataagaacatgaggcttag
atgaccaaaatattgagactaagtcaaaaacattttaaggctttgcagac
tctaaaataccgaatttcttagaaaaatagacaaaaatactcaaaaaata
tttttaggcttaaaagttaaaaaagttagttaagaacatccaaagtcttg
gatattcttataaaaaacgtgtattctgaTAATCTATCGATTAAAGTAAC
ATTACAGATTGAAAGTTAGATAATTACTTTTAGACGGTTGGAGTTCTTTT
ACTCATCAtgcttctttttttgttttagattttggCATTGAAAGTAGTAG
TGGCTTGTTtagaaaatgtagaaaaagtGGCGGTGCGAGCAATTGTGCAG
ATTTAGCAAGTGACCAGCTTTCTGACAAGGATAAAGCGGTTCAAGCATTC
ATGATCTTGTCTGTGTTAACATCCATTGCAGCTGTTGTTTTTGCTATCTT
ACATATGGTCACTGACAAAATCCCTGTTAAGCTGATCTCTTTGCTCATGG
TCGTTATTTTCGTTCTGGCATTGATTGGTCTGGCAATCTTCACTGCAAAT
AAAGAGGACCTGGCCTCTAGTGCTGATTACGGATGGGCTTATGGATTGGG
ATGGTTTGGCGCCCTAGCCGCCCTTATTGTTGGTGTATTAGTCTTTGTAC
TGTTTCGTTCGTCGTGATTTAACGGTGATTCAAACTTAAAATCCAAAGAA
ATCTTGAACAATTATATACTGTAAGCTTCATGTTATCCCAGAATCGAAAT
TTTCGATCAAAATATCTAATATTTATCATTCTAGGTATTTCTAACATTAT
AATTAGCACATATTTTATCCCCTGTTGATAAACTGTTTAACTTTGTTTCC
GCGTTAAGTCCGCCCTAACGCTTTGGGCGTGGTGGCCGTTAAAATGGACA
ATGTTTTAGATGTTTGTAACATCTGGGTGGCAATATCCGAAACCATATGA
ATCGATTTTATCTGTAGTATTTATAGAGCACTTTTCTAATATTTTCTTGT
GTTAgttatttttcaagaaattcacTTTTAAATATTCTTGACCGTTCACa
acacaaaattttttatttctttaacgCTCTCCATCCCGTGGGGTGTGTCG
CCCCCTGCTAGAatcttttcaagtttttgaaCCATTC Coding sequence (CDS) from alignment at sc0000113_pilon:275523..279959+ >MSTRG.13860.1.p1 ID=MSTRG.13860.1.p1|Name=MSTRG.13860.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=978bp|location=Sequence derived from alignment at sc0000113_pilon:275523..279959+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTGgatgtgaaaaaaattggagTAGTAGCTGCATGTGCATTCGTCTT
TATCCTTCTTTCTGCGTCAACTGGTGGCGTGGGATGGGTCACATCTGAAA
attttggCATTGAAAGTAGTAGTGGCTTGTTtagaaaatgtagaaaaagt
GGCGGTGCGAGCAATTGTGCAGATTTAGCAAGTGACCAGCTTTCTGACAA
GGATAAAGCGGTTCAAGCATTCATGATCTTGTCTGTGTTAACATCCATTG
CAGCTGTTGTTTTTGCTATCTTACATATGGTCACTGACAAAATCCCTGTT
AAGCTGATCTCTTTGCTCATGGTCGTTATTTTCGTTCTGGCATTGATTGG
TCTGGCAATCTTCACTGCAAATAAAGAGGACCTGGCCTCTAGTGCTGATT
ACGGATGGGCTTATGGATTGGGATGGTTTGGCGCCCTAGCCGCCCTTATT
GTTGGTGTATTAGTCTTTGTACTGTTTCGTTCGTCGTGAATGGTGgatgt
gaaaaaaattggagTAGTAGCTGCATGTGCATTCGTCTTTATCCTTCTTT
CTGCGTCAACTGGTGGCGTGGGATGGGTCACATCTGAAAattttggCATT
GAAAGTAGTAGTGGCTTGTTtagaaaatgtagaaaaagtGGCGGTGCGAG
CAATTGTGCAGATTTAGCAAGTGACCAGCTTTCTGACAAGGATAAAGCGG
TTCAAGCATTCATGATCTTGTCTGTGTTAACATCCATTGCAGCTGTTGTT
TTTGCTATCTTACATATGGTCACTGACAAAATCCCTGTTAAGCTGATCTC
TTTGCTCATGGTCGTTATTTTCGTTCTGGCATTGATTGGTCTGGCAATCT
TCACTGCAAATAAAGAGGACCTGGCCTCTAGTGCTGATTACGGATGGGCT
TATGGATTGGGATGGTTTGGCGCCCTAGCCGCCCTTATTGTTGGTGTATT
AGTCTTTGTACTGTTTCGTTCGTCGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000113_pilon | genome | sc0000113_pilon:275523..279959 + |
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