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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000113_pilon:134938..137190+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13854.1.p1 ID=MSTRG.13854.1.p1|Name=MSTRG.13854.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2253bp|location=Sequence derived from alignment at sc0000113_pilon:134938..137190+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTGATCGTATAAAGCTCGAATCCAAAACAGTCTAGCACACGAGTACAAT
TTGGTATAGAGAAAGAGTCTAATTAAAAGGTGAACAGTTTACCATCAGTA
AAAAAGATGAAGGTTCAATTCGCTTTCTTCCTCGTTTTAGTTGGTAAGCA
AATTTAGACTTCCTTTCAGATTGGGAGCCTTTTCAGATTTGAGGgtattt
tgtctattttcttgAGAAAATGGATGTTTAGGGTtcgaaaagccttaaaa
tattcataACTTGTTtgtaacattttgaccatcgaacccttatgttctta
tatcgTTTTTTCTTATGAAAAGCGTGCATTTTAGGGCTATACAACACGCG
TCTGTCTTTACGTTTCAGTGTTTTTGCGTAaccaaatacacgctttttct
ttacaagaatacactttataagaatgtccatcatgatgaaaatagccaaa
aaattaagattatcgttaaaatatcaccatcatggaattaggCAACAAAA
TCTAATAATGTCATTTACAGAgcaattttaactgtaaattacCAGTTTTC
CTTCAGTAAGGCTCGAAGTtctcacaaaaatgccattttttgctttaggt
gtgtattttttgttaaattttggttgaatttcaaccctaacctaagaaaa
tatcctaagaatattttaggatgattttcccaaaaaagttaagaatatcg
gtgatgaaataaaaaaacaccgctctttaaaaaaaaagcgtgtagaccTA
GGGATGTATTACAAGGATGTGTTGCAATGTGAATTCGTTTAATCTTCTGT
TGATTAATCTCTGTCTTGATTTCTAGGATTGGCATTATCTGAATCTCACA
AAGGTCAGGGGAAAAGGAAGAGTCTGTTACGGCAAAGATGCGAGTTTGCG
ACCAAAAGGTGTGCGACATCTTTAAAAGAAGGGGAGGACAAGTTAGTGCT
CTGCGCATTCGACGGAGCAAGATATGTAGATGTGGAGAACACTAAAGAAT
GTCTTAAGAAAGACGTCTTGTTTTGCAACAAAGATCTAAAGCTAGTCCAC
CCTAGACGGTGTGGCCAATGCGATGAAGAGATAATACTTTGTAAAAAGAA
GAAAGCAAGAAGAGGAACGAAACAAGTTTGTGATCAAACTGGTAAAACAT
ACGAAAGACGTTGCGATGTCTATATAGCAAGATGTCAAGGTGTCGCCGAA
AACATCCCCTTTGCTGATCTTCCAAGACATCTAAGTAAGCatcctctttt
ttctttctgtcACTCAACTTGTCTTGATTTTAATTAACATAAATATATGC
TTTATTAGGTAAAACTTTTACTTTAGTCTTCAAGAAAGTGTTAAAACCGA
ACCTAAATATCAAGGatatgtttttacttttttattcttttgacgttttt
catttttcatggatatttttGCTACTTTCATAAATATAACCGGGATTTGC
TATCAATACTCATGGTACTAATTAAAGGGCTGACATTTTATCCTATTTTG
AAATAGCAGACAGTGACAGGCGGACTTTTATAAAAACTCTTTTCTTAAAC
TCTAGAATTTAGGTATTATCGTCAACTCAGTTAGAGGCACGTGTCCCTGA
ATCCTGAATAAAATGTATATCTACCATGTCAACTTTAAGAATTTTtaata
attcacttttttttcttctagaaTGTCCGAAGGAGGAACCAGAAGTCAAA
caagcataaaaatattttgagaagatatgtaaaggttttttttatgtAAA
TATCTTTTACCCTCTTAACTTGTGCTTTATTGAGTGAGGAAAGAGAGACC
CGGAAAatttacgtaactcgaaaacaaaatcaaaaaaaaataattcgagT
TATATATCGAACAGTAAATAAGTTACGAAGTctacttatgacgtcataat
ttaagACTTATGTCGTCACATttgtcgtaactcgggttttcgtaactcga
gtttttctaactcgggttttccgggcctcgaGGAAACACGAAATTGATTC
CTCATTTGTTTTAGTGTCCTTCCATGGATAATTATTGTCAAATGTTTGTT
ATTTTAAACGAATTGATAAAacacatttaaaaaaaggtaGATGCtccaaa
agtcaaaatatttttacattacATTATCACCCTAATATTACATAATCACC
CTGATTTTTGTAATCACCCTGATCCACACAAAGATTTTTATTGGTCGAAA
AAATATCGTTCTATTTCCCAATCCTTATCTACActcttttttaatgaaaa
cta Coding sequence (CDS) from alignment at sc0000113_pilon:134938..137190+ >MSTRG.13854.1.p1 ID=MSTRG.13854.1.p1|Name=MSTRG.13854.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1449bp|location=Sequence derived from alignment at sc0000113_pilon:134938..137190+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGGTTCAATTCGCTTTCTTCCTCGTTTTAGTTGGATTGGCATTATC
TGAATCTCACAAAGGTCAGGGGAAAAGGAAGAGTCTGTTACGGCAAAGAT
GCGAGTTTGCGACCAAAAGGTGTGCGACATCTTTAAAAGAAGGGGAGGAC
AAGTTAGTGCTCTGCGCATTCGACGGAGCAAGATATGTAGATGTGGAGAA
CACTAAAGAATGTCTTAAGAAAGACGTCTTGTTTTGCAACAAAGATCTAA
AGCTAGTCCACCCTAGACGGTGTGGCCAATGCGATGAAGAGATAATACTT
TGTAAAAAGAAGAAAGCAAGAAGAGGAACGAAACAAGTTTGTGATCAAAC
TGGTAAAACATACGAAAGACGTTGCGATGTCTATATAGCAAGATGTCAAG
GTGTCGCCGAAAACATCCCCTTTGCTGATCTTCCAAGACATCTAAaaTGT
CCGAAGGAGGAACCAGAAGTCAAAcaagcataaATGAAGGTTCAATTCGC
TTTCTTCCTCGTTTTAGTTGGATTGGCATTATCTGAATCTCACAAAGGTC
AGGGGAAAAGGAAGAGTCTGTTACGGCAAAGATGCGAGTTTGCGACCAAA
AGGTGTGCGACATCTTTAAAAGAAGGGGAGGACAAGTTAGTGCTCTGCGC
ATTCGACGGAGCAAGATATGTAGATGTGGAGAACACTAAAGAATGTCTTA
AGAAAGACGTCTTGTTTTGCAACAAAGATCTAAAGCTAGTCCACCCTAGA
CGGTGTGGCCAATGCGATGAAGAGATAATACTTTGTAAAAAGAAGAAAGC
AAGAAGAGGAACGAAACAAGTTTGTGATCAAACTGGTAAAACATACGAAA
GACGTTGCGATGTCTATATAGCAAGATGTCAAGGTGTCGCCGAAAACATC
CCCTTTGCTGATCTTCCAAGACATCTAAaaTGTCCGAAGGAGGAACCAGA
AGTCAAAcaagcataaATGAAGGTTCAATTCGCTTTCTTCCTCGTTTTAG
TTGGATTGGCATTATCTGAATCTCACAAAGGTCAGGGGAAAAGGAAGAGT
CTGTTACGGCAAAGATGCGAGTTTGCGACCAAAAGGTGTGCGACATCTTT
AAAAGAAGGGGAGGACAAGTTAGTGCTCTGCGCATTCGACGGAGCAAGAT
ATGTAGATGTGGAGAACACTAAAGAATGTCTTAAGAAAGACGTCTTGTTT
TGCAACAAAGATCTAAAGCTAGTCCACCCTAGACGGTGTGGCCAATGCGA
TGAAGAGATAATACTTTGTAAAAAGAAGAAAGCAAGAAGAGGAACGAAAC
AAGTTTGTGATCAAACTGGTAAAACATACGAAAGACGTTGCGATGTCTAT
ATAGCAAGATGTCAAGGTGTCGCCGAAAACATCCCCTTTGCTGATCTTCC
AAGACATCTAAaaTGTCCGAAGGAGGAACCAGAAGTCAAAcaagcataa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000113_pilon | genome | sc0000113_pilon:134938..137190 + |
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