MSTRG.1385.1.p1 (mRNA) -

Overview
NameMSTRG.1385.1.p1
Unique NameMSTRG.1385.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000006_pilon:2646800..2650277-

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.1385.1.p1 ID=MSTRG.1385.1.p1|Name=MSTRG.1385.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3478bp|location=Sequence derived from alignment at sc0000006_pilon:2646800..2650277- (Clytia hemisphaerica_ch_hm2_pilon)
CATCGAAAGTTGGCGACCTTAACATGACTGTGAAAACAAACACATTTTTC TTTATTTTTCAGTCCTGTTCACGCAACGAAGAATGCAACAAAGGTAACAC GTGCAACTTATATTCAAAGAAGTGCGAACGTTGTCGATTCCGTGAAGAAA TTTGCCGTCGCGACGGGAACTGTTGTGACGGATTGAAATGCTTATGGGGA CGTTGCCGTGAACCGATAACTAACGGAACGGAAAAAAGCTTGTGTAAAAG TAATGAAGATTGTCACTCGGGACTTTGTTGTGCTAAAGAACACGGTGTCA GCGTCTGTAAACGATATCAAAAAGAAGGTGATACGTGTGAGATCCCGTTA GGAGGATTGGTATTCAGTCTACATCACTCGTGCCCGTGTGAGCAGGGCTT AAGGTGCAAAGTCAATCGCCGGAATAGGTTAGTAGCCTTTATTCTTTTTC TACTCTTTAAGACGACTTAAATTTGAAATCATCAAGGGAGTTAGTCCCAG CTAACCACATTAGGTAATCCTTAGTTATGAGGTCGTGAATGATAGGAAGA TGAAGAAGATACAGATAAGTCTCCATAACTCGAACTTCTGTAACTCGAAT CTCTCTGTTCGAACAATAATTCTATTCTATAGAGTTATAAAGACTCTCTG TATTTAGATTGTTGTTGCCCACCTAGAAGAAGCTTCCTTGAATGAGACAA ACATATTTCAAAAATGTTAGAAAGGCTTAAATCAACGGTCGAGGGTGGTA GACCACTTATGTCGTGGATTAGAATACTTGGAAAATATTGAAACCAAAAA AACAATCGAAATTCCTTAGTACTGATTTCATCATATAAGATGACTTCAAA GAGCGTCTTTTGTCAAAAAAAATAAGCTAGGGTAGGGACAGGTCATAACC ATAAAATTCTGGCCTGCAGTTATGTTTTTTGTGGTTATCACATTGAGGGA AATTTAATATCAATTCAGTTATTAACTGTTTCCCACTCCTTTTCACTCGA AATCACTTTAAATGAAAGCCTCACTGTCCTCACTTACTCGATATAAGAAA ATTATGGTGATGCAAAACCGTTATAGCCTGTATCAAACTCTTAAATGAAA CGATAACACAGCAAGTTTTTTTCAAAATATGAATAAACGTCCGTGTGTGG GGTGGTACAGGCTAAAACCATTAGTGGTCTCGCCATTAGTAGAGCTCTCG AACTTTAATTCTTCGAATATGTGTCGTAGTAATTCTAAATGCCAGTCGAA CTAAAAAATAACTTCTGTAATACAAACAAATTAAGACTTTCGTTCGATTT CGAATTGGGAAGAGTCAATACTGCAAATTTAATCAACGGGCACACCTATA AAAAGTGTTTAGAGTAAGGAACAGTTGCTTAAACCCTTTGAAGTCAAGAC CATTTCAGCTCGTACGATAACCAAATTTAAATTCTAGTTGGTGTGTTGGT CTAGACTGCTACAGGCGCCTTAGGATTTAGTCAAGACGTGTCCAGTCTAA TTCTAATTTATGTGCCTACTAATCGTAAAAGTGATGGATTTGTTTTCGAT GGCTCAATTTTAAAAAAATCTGAAAATCTTTGGATGACGTCAGTATATAT AAAGTCCGAAATCCTTTTTTCAAAACAACTTTCAACGAAAATTCTAATCT AAATATTTTGATAAAGTAATAATGTATTGATTTTATCTTGTTTGCGCACG CGTATTAAGAACCGTTATATCCGCTACAAAGTACAGTGATCTTTTACTTA GGATTATCTTTACGAAAAATACACGATTAAGAAAACTAAAGCAACACGAT TTAAATTCCAATATCATTACGCCAAAAAACCTCATATTCTTTGCAATATG GGCCTAGTCAAAGCTAAAAATGCAATGTGAAAACTGAAGCTCTAAAGACA GCTATCGATCCCGGCCAAACTGATTAAATTTTTGAATTTGCTAACCTAAT GGCACTACTACTTGATGTGGGCCATAACTTTATTATACCGTATTACTGGG AATAAACACCCCCTTCTTTTAAACGCCCCACCAATAAACGCCCCATCTAA AAATCAAAAAATTAATCAAACGCCCGGGGCGTTTATTCGAAGTAATACGG TAATATCTTTTCCTTTCGTCTCGTCAAGCAATGATGATGGTAATAGCTAT AATATCATTGTATGAAATATTGACCCAAATCGAGTAATTATACCATGAGA CTAACGAATCTCGAACTCAAATTGAAGAGCGGATTTAGATATAGAACTGC ATTAAATCCGTTGTAAACTCTAAGTCTTAAAAAAGGTAGTTGAGCGACCT TTTATGAACATTAAGTTCAATGACTAAAACTTTCGCTTTTTTTTATTTCA GTGATGAATTTCGCCAAACCAACGGGCGGTGTATCAAGTGAGTACGCAAC CTATAATCAGTGGCGTGGGCGTGAACAGGTTCACACAAACTGAATAAAAA TGACAGAATATTAACAAAATTCTGGTCCCAGTGAGTGAATAACATACAAG TGGACTGAGTTCGAATCTCTGGATGGGCCGTATACAAACTTGTGCAATAA TTTTTTATTCAAAGAGATGTGTTTTGGTATGAGAAGAAAACACAAATGGA TGTCTCGAGAAAACACTTGTATACCACTTAGACAAAATAACATGAATGGA TTTACAGTAATAAACAAAGATTTAATCGAATGTTTTCATTTTGGTATGCG TGGATAAAACAGGACACGTTTGGAAGTGTAATGAATGGAATAACTGGTAA CATAACACATCAATGAACTTTCTCGAAAATGAATTTCTATTAATCTAATG GACTGTTCCCTAGAAAAAGAATCATGCACAGGATCGTGTAAAACTGATCA AATTTATCTTTATCCTAAAATAAAAAATTTATGATACCCTCGCAAAGGAT TTGATTCGACCTTTGTTGTATTAAGTAAATTTACACGTTTTTTAATAAGT GTTGAAAAGTTTTGTAACCTTCAGACTTTTTGGGTTTTAAGCCTGAAAAT GTTCTTAAAGTGTGGACCACGAGGTTATTTTGGCGTGACTTCCTAAGAAA TTGTATGTTTCAGTGTCTCCGAAGCCTTAAAATTATCTTAGGATATTCTT AAATATCTGGGCTACGAAGCCTTATTTTCTCATATAAAAAACGTGTATTT GGGTATTAAAGCTACAGAACTCTTTTTAAGGAACAACCCATTGGTAATAA TGTGGGAATGCATGATTTTATTAATTAATATCAACAGAAAGAAATTAACA TTTAAAAAATATAAATTTAATTTATTTTATAATATTCAAAGAAAATGAAG GCTAAACTTTACACCCCTTTTTATCAACTTTCACACCTTGTAAAACGTAG TAAATATATTATAATAATGGCTAAAATCTTATCGAAAATTATATTGTTTG CCCTTACCCCCTTGTTGTATAGCTTTTTTATTTTTATTTGCCCAATTTTA ATTTTATAATAATATATTTATGTGAAAA

Coding sequence (CDS) from alignment at sc0000006_pilon:2646800..2650277-

>MSTRG.1385.1.p1 ID=MSTRG.1385.1.p1|Name=MSTRG.1385.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=930bp|location=Sequence derived from alignment at sc0000006_pilon:2646800..2650277- (Clytia hemisphaerica_ch_hm2_pilon)
TGATGAATTTCGCCAAACCAACGGGCGGTGTATCAAGTGATCGAAAGTTG
GCGACCTTAACATGACTGTGAAAACAAACACATTTTTCTTTATTTTTCAG
TCCTGTTCACGCAACGAAGAATGCAACAAAGGTAACACGTGCAACTTATA
TTCAAAGAAGTGCGAACGTTGTCGATTCCGTGAAGAAATTTGCCGTCGCG
ACGGGAACTGTTGTGACGGATTGAAATGCTTATGGGGACGTTGCCGTGAA
CCGATAACTAACGGAACGGAAAAAAGCTTGTGTAAAAGTAATGAAGATTG
TCACTCGGGACTTTGTTGTGCTAAAGAACACGGTGTCAGCGTCTGTAAAC
GATATCAAAAAGAAGGTGATACGTGTGAGATCCCGTTAGGAGGATTGGTA
TTCAGTCTACATCACTCGTGCCCGTGTGAGCAGGGCTTAAGGTGCAAAGT
CAATCGCCGGAATAGTGATGAATTTCGCCAAACCAACGGGCGGTGTATCA
AGTGATCGAAAGTTGGCGACCTTAACATGACTGTGAAAACAAACACATTT
TTCTTTATTTTTCAGTCCTGTTCACGCAACGAAGAATGCAACAAAGGTAA
CACGTGCAACTTATATTCAAAGAAGTGCGAACGTTGTCGATTCCGTGAAG
AAATTTGCCGTCGCGACGGGAACTGTTGTGACGGATTGAAATGCTTATGG
GGACGTTGCCGTGAACCGATAACTAACGGAACGGAAAAAAGCTTGTGTAA
AAGTAATGAAGATTGTCACTCGGGACTTTGTTGTGCTAAAGAACACGGTG
TCAGCGTCTGTAAACGATATCAAAAAGAAGGTGATACGTGTGAGATCCCG
TTAGGAGGATTGGTATTCAGTCTACATCACTCGTGCCCGTGTGAGCAGGG
CTTAAGGTGCAAAGTCAATCGCCGGAATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.1385MSTRG.1385Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1385.1.p1.exon2MSTRG.1385.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1385.1.p1.exon1MSTRG.1385.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1385.1.p1MSTRG.1385.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000006_pilongenomesc0000006_pilon:2646800..2650277 -