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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000113_pilon:58806..62012+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13847.18.p1 ID=MSTRG.13847.18.p1|Name=MSTRG.13847.18.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3207bp|location=Sequence derived from alignment at sc0000113_pilon:58806..62012+ (Clytia hemisphaerica_ch_hm2_pilon)
aaataaaaaatgaaagacgAACGTTCGTTGACAGTCAAAGATTCAAgtta
gttttatttatttttgagtttCTCAAAAAGTCTTTCAATTTCTATTCATT
GGGTAGTATATGATGGTCTAGGGCTCacattttttaattatatatttttc
accGGTTATAAAAATGAATATCCTAAGAATTTTCTACCAATGTAGTTTAG
CCTTAAAAACTATAGCTAGAGTGTAGTGTAAAACAAAGGCAAAGTTTCTC
CACGCTTTCAGGCTTGCAACAACACCTTCGAGAAAATTTGTTGTTGTGCC
AAAAATGAAACAACGGTTTTCATAATTGCGTAACTTTactaaatacacgc
ttttttttataagaatggtgtaaatccatttcatcatggatattcttaac
ttttttggggaaatcatcctaaaatattgttacagcattcttaggttagg
atcctaattcagactagatttaacatttagtacatacgtctcaagcagaa
aatggcatttttgtgaaagaagtgAACCTTACTTGAGGgcaattgacaat
ttataatcgaaaatactctcgggtacctaatagccgccccccctgctaat
taatttttgggaaaatgtttttgaaagttccctcttttgtcctaattcag
ctgtattagcctccatttcaaaaattttccacccaggacatttttattcc
aaccccccccccctcacttattaagttttgagattttttccaaccccccg
gctattaggtacccgagagtaggttgTTTtgaggttttggccaattttca
gttTCActcttagttcttataaaaaaagcgtgtatttaaagTATTGCAAA
AGCAATCTTTCCAAAAGCATCACATTTCAATCTTTCCTAACTCCTAACAT
TTTATCAACATCacatttcataaattacgtcacgaacatcacttgcctcg
tattcaaacaatttctatGGAGATTatataggaagtagttttaataaaat
ccgctgggagctAATCACCAATGCaacaatttcaaaacgaggcacgtgat
gttcgtaacgtaatttatgaaaaggtctattcttttcttttttagaaatg
ttcGATATGTTAACACGACATAGCCGTAATCGATATCGGATCATTGTTCT
ATCCTTAATCTTCGTCACATCAATATACGTTTTTCTTAATAAACGTAATT
GGGCATGGTACAATCGGTCTAGTGGGGAGAGTATTTGTGAAACACCAGAG
CCTGAAATGAAGGACTTGATTGCACTAGCGACTGATACCCGTGACGTCTT
ACACGGACTGAAAATGACGTATTTCTTGATATATGGCAGGTATGTTTATT
TGAAGTTTTTCTCTCTGATGGTATTGAAACTTTTTTCGGATTGTTATTGT
Aagcttattttttataagaaagaatatttttaaagcctttggatgttctt
aactttttgggttttatgCCTTAAATGtgatcatagtccgtataaaaaac
cccggtctggaagccttttgtttctttctattgaaCTTGAACTTGCAttg
agaaattattttattttgctcactttttgatcatgtgattaacttttgaa
ccaatcccaagaggagtattGGTAATGTGATccaaaactgagcaaatcga
tttttatcttttgaaattatCAACAAATGAAAAAGTTAATAAATAGTTAC
ACAAAAGGCTTTTAGACCAGGGCTTTTTATACGTTCATAGTTAGAggggg
gggTCTtaggttttgatgaaccaaaagcaagggggtgctaaaagtatgac
tttcttaaggggggttgccagttaaggggggtctttttacctaagggggg
tcttcttacctaaggggggtcttcttagataagggggatcttccttgaat
tatgactcttgtacaatcgtttcatttatactgattttctaaggggaggg
tgtaaaattttaaatgaatttcataagggggttagcacttaatggggggt
cctcttacctaagggggggggtcttgacccctctagaaactatgaatACG
GACTATATGACGTGATAAAGTGATGTCACTGAATCCTGATGCATGGTTGT
GTTCAAAAAGTCAATACTATAGAGAACAATATGATACGAACGTTTGAATT
TCCATCATTTTTTAGCCTGTGGGGTGCATTACGACACAATCGACCACTAG
CCTGGGACAACGATTTCGATATCGGTTTAGTTTACGAAGAACTAAAAGAT
AAAGGATTAGAacaaaaactttataaagaacttcaaaagaaaaatatcaa
aatttattatcGGTTATGGTTCGGTACCTATCGGGTTACTCGGGATACCG
CACGTGGTGATTTGATGATATACCGACGAAACTATTTTGATACTTGTGTA
CGGTTAGGTATGGAGTCGTGGGTTTTCTTTGTGAATTATCGTAAGTATCA
TCAATTCCCATGTCGATTGATTAAGAAACCATTACCTagtatgaaatttt
caaaagtgaacTTCACGGTACCGAGAGAAggaaatgaaattcaaaaacat
ttttatccaGAAGACTGGTGGGTTGAAAGTAAACCATCTGGTTGTTGATG
ATGTTGATGAAACATTCAGAAACATTCTACGATTTTAGCTTCTTGatttt
tcaatgaatttaaGACTTGAAAATGTTCAAGTATCATATGCCGGAGCAAC
ACTGTTGTTATTCCGTTGTTGCTAGATTTAGTTAGTTTATATTAAGTCcg
aacttgatttttcaaaatgtgaaatGAATGATTCTCTGATATAATATTTG
GGCGAATATTAAACGTCGTCGAGTCAAAGcacatttaagggctctgacca
tagtcgaaaaattgattttagtatttgaacataaaagttatgtttaacac
ttttaacaaagaattgcctttacaaattgcttaagagtaattaaaaattt
aattacaaaaatgacgctatgaactttaaaaagacgttaataatatgttg
tattaccttcttttataaaaagtgctaacttttgatagtttttttcaaac
tgttcgcaaagaagaattttctaaattaatgcatcaaatgttatggctgt
ttttctttggaaaattgggatgaaaaattggtcaaaaagcactattttca
agattttgagacaaataagcgtttagaaaaattttccgaaaatttaattt
tagttcg Coding sequence (CDS) from alignment at sc0000113_pilon:58806..62012+ >MSTRG.13847.18.p1 ID=MSTRG.13847.18.p1|Name=MSTRG.13847.18.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=936bp|location=Sequence derived from alignment at sc0000113_pilon:58806..62012+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaagacgAACGTTCGTTGACAGTCAAAGATTCAAaaatgttcGATAT
GTTAACACGACATAGCCGTAATCGATATCGGATCATTGTTCTATCCTTAA
TCTTCGTCACATCAATATACGTTTTTCTTAATAAACGTAATTGGGCATGG
TACAATCGGTCTAGTGGGGAGAGTATTTGTGAAACACCAGAGCCTGAAAT
GAAGGACTTGATTGCACTAGCGACTGATACCCGTGACGTCTTACACGGAC
TGAAAATGACGTATTTCTTGATATATGCCTGTGGGGTGCATTACGACACA
ATCGACCACTAGatgaaagacgAACGTTCGTTGACAGTCAAAGATTCAAa
aatgttcGATATGTTAACACGACATAGCCGTAATCGATATCGGATCATTG
TTCTATCCTTAATCTTCGTCACATCAATATACGTTTTTCTTAATAAACGT
AATTGGGCATGGTACAATCGGTCTAGTGGGGAGAGTATTTGTGAAACACC
AGAGCCTGAAATGAAGGACTTGATTGCACTAGCGACTGATACCCGTGACG
TCTTACACGGACTGAAAATGACGTATTTCTTGATATATGCCTGTGGGGTG
CATTACGACACAATCGACCACTAGatgaaagacgAACGTTCGTTGACAGT
CAAAGATTCAAaaatgttcGATATGTTAACACGACATAGCCGTAATCGAT
ATCGGATCATTGTTCTATCCTTAATCTTCGTCACATCAATATACGTTTTT
CTTAATAAACGTAATTGGGCATGGTACAATCGGTCTAGTGGGGAGAGTAT
TTGTGAAACACCAGAGCCTGAAATGAAGGACTTGATTGCACTAGCGACTG
ATACCCGTGACGTCTTACACGGACTGAAAATGACGTATTTCTTGATATAT
GCCTGTGGGGTGCATTACGACACAATCGACCACTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000113_pilon | genome | sc0000113_pilon:58806..62012 + |
|
