MSTRG.13832.4.p2 (mRNA) -

Overview
NameMSTRG.13832.4.p2
Unique NameMSTRG.13832.4.p2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000112_pilon:798763..802665+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13832.4.p2 ID=MSTRG.13832.4.p2|Name=MSTRG.13832.4.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3903bp|location=Sequence derived from alignment at sc0000112_pilon:798763..802665+ (Clytia hemisphaerica_ch_hm2_pilon)
CTAATTTTTATTTGGATCTTCACTATCGAGATGATCGTCAAAATGTTTGG
TATTGGATTGAGAGCATATTTCCAAATGGGGTTCAATTGTTTTGATTGCA
TCGTTGTCATGTTAAGGTAATGTTTTGGCTTACTAAATAACAATTGatga
tatgcatcattgcaatgtcttccacatCACCCACATGGACtcgacagctg
attggttgtaagtgaagtaaaatcagtcaaaacgTCACCTGCaatcaatc
agctgttgggtccgtgatgtaatgtcagaaaacATTGctatggtgcatat
catggataTCTATTTATGGACATCAGAAGGTTTTGAGTCTGGCTAGAAGA
GTTCCTCCCCTTGGTCAAGTCAAATTTAATTTGGAACACTGTTCCGTTGA
GTGAATTTCCTAGGGGGAGACAAATTTCCGGGAAGCATATTTCCAGAAGG
GGGTAAGTAACCGGGAGCGAAATTCCTGGGCACACGTTTCCGTACGGTAG
ATCTTTTTGGTGCAAGTTTCCGAGGGGCAAGTTTCCCGGGGTCAAAGTTC
ATGTCACCAGTAGGGAAATGATTGAGTTACGTTAACTACTATAATCATGC
ttaggatttttcaaaatgtttttttcgtaTATTTAGCATGATGGAATTAC
TCATCAATGATAATAACAGTTCCGGTAATTTTACCGTATTCCGGTCATTA
CGATTACTCCGGATTTTCCGTCTTATCCGACCGATGCGTCATCAAATTGC
CGTTATGTTACGAACAACGTCGTCCGTCATGACGTTTTTTGCGTTGCTGT
TTCTCTTCATGTTCACATTCGCTATTTTGGGAATGCATATTTTTGGTGGg
aaatttgttttcaagaaTCGATATGGGAAAATGGTGTTGGCAAGATCcaa
ttttgattcttttgtATGGGCTATTGTGACTGTTTTCCAGGTAAATCGAA
ACCCGTTAAATACTCTCGGGTCCTTAATagccgggggtttggaataagca
ggggggttggaaaaatctcaaaaattgagCGGGGGGTAATTTTCCTGTAA
CGAAAAGGAGGCTTACAGcagaatagttttcaaaatcaaggttttaaaat
ttgaaattcattaaACTACATCGAATCAAAAATTCGTTTAGGGAAttaaa
atcgtgaatttttcgagtaatcacatgttttgactgcattgatataattt
ttcaaCCCGTGTATTTTGGAGTTTATCTGTAATTTAACAGGTGGTTTTTC
ATCCACCTCTAACTGTTAGGTTTTTTCGATTCGGGTGGGTTattggcttc
caggctatattctgagccttattttTAGCCAGTTAGTTAAAGTCAGAGTT
AAAACACTGCTTAAAAATCGTAAGTAAAAgcgcacttaaaaatcacttgc
agtTTTAGAATTtcgagggaattccccttttgtgccaattttataGCCAA
CATTGTATTAGGTTCTAATAGAGGGGACACGGTATATACATTAAGCAAGG
TGTTTGAATATTTATTTGAAAGGTTTTGcttttgaataagagtgatatcg
tctgcttattcatcaatttaaattcataagctttttcacacttgattgac
acggatgtggagcaagattggtcagaaagaacaaaagaaaaacatttttt
gcttatatcagcataatataacaatagacagacactgtcctggtatgaaa
CATCTCTCTAacatgaaacggaaacacttatgtAaaaatAaaACCCTTAA
TATGTTTCTTACCTTACAGATACTGACTCAAGAAGACTGGAATCTAGTCA
TGTACGACGGTATCCGAGCGACAACAAAATGGGCGTCACTTTATTTCTTA
TCCTTGATGACGATTGGTTATTATGTCTTGTTCAACCTGTTGGTTGCTAT
CCTTGTCGAAGGTTTTACCACGCCGCTCGTAAGTGTATTTAGAGTGTTCA
ACCTGTTGGTTGCTATCCTTGTCGAAGGCTTTACCACGCCACTCGTAAGT
TGATCTAATACATAGTCCCTCATTAGTTCCCTTTTTTAACAATTCTTATA
GCCCTCACGGTCGAGCCACATTCATCAGGaaaaaaaTTGGTCGTATATAA
CAGCTTTTAGGACCTCCGTTCAGGTAAAGAGGGTTCAGGTAATAGTTGAT
GGTAGTTTACTATATCGTATAATTTATTGTATCGTATTTTGATTTCCTAT
AATTCAGGAAAAGAAACGTATGACTCGACACATTGTTTCATTGTTGAAAA
GCAAAGCCAACAAAAAGATGTTAACATTGAAGCGGACAATCAGTTTACCG
GACATGCTGATGAACAATAATAACGTTTCCAATAACAACAATCAAAACAC
ACAAGAAGATGAGGTTCGTGTGGGAGGAGGGTTCCTTGATCATTGTTTTT
CCAGGGATgtcaaaatcaaagtcaatttccctgTGGGGTCGACACTGTAt
ggtatttttccaccggggacgaaatgccgtatcggggaaaaaaatttcag
agttttatttagtcgggttttttttcgtcgggggaaaatttcgtcacccc
ctgaaaatttttcatcactttcccccgacatttttttcccccgataaggt
atagtaAAGTATTATTCCCTTTGCACAAAATATTATTATTGACTTATGTA
AGAAATAACGGGCGTTAGAAACAAGTCGTGTTTTCATGCTCCGGTCCTTT
TCCTTTTGATAGATATCTACTTTATTTTCAGAAACAACCGTATGAATGAA
GTGTTGATCAAAAATTGTACTCTTTCTTTAGACAGAAACACAAGGACAAA
TATATGCACGGATGATGGCAAGACGTCGTACGCTGGGTGAGTCTTGACTT
TATAGGTGCACGTATCtttgaaatagtttttgttATAAGAGATGCGAATC
AAACTTGGAAATCGCTCGGAAAACCTAGAAAATTTTTGCTGATAAGCaat
ttttttgtggttttgccctttttattAAACctttgtcacaaaaattgaaa
aagatctATAATATCATAATATCATACCCTAAAGTTTTAATGAGGACAAC
GATTACCAGCTCAAAAAACTTACTTGGCAAAAATTGGCTGAGCGGACGTG
ATTTTTGAGGTCGATTCGCATctcgataaaacaaaattagaaGGTGCTAG
CAGCCTAGAGTTTGGTTATTTATAAAGCCATCGATTTTAGCGCCCGTCAA
TCCCAGCAACTGGGACTAGAGTAAATATGAGCTAAAATGTGCTAGAATTT
TCTAGCTTGTGAAAGCATGAATTGTTATGTCTACAAAAATCTGATTTCAC
AAAAtcattattttataaaagatttctgttcttaaaatacaataatttat
ttccaaacatttttCCACAGGAACGATAGGTTTGAACAACCACGACACCT
TCTCTTCCACCAAGAATAATGCTGGTGATTACAGCTCTAGTGAAGGTGAG
ACTTCTTGGGAATTCTATCGAGCGTTACATGCATGACTTTTCTTCCTAGA
ATGTTTATATTTTAGTCATGACGAGAATTTTATTAATTATTGCACCATAT
TAAATAAATCTGCCGATATATCAATCCGGCGGTTCTGTGAGAACTATCCG
GGCTTCGTGTTTCAGATAGGAATGAGTGGCTTcgtttcccatccaagagt
ttcatTTCTAGCTCCATTGAGGCTTTAAATCCAATGGTGATTTCCACAAT
GAACATAAAATTGTATGCACTCCCTTTACCTTAAAGATGAAGAAGACATC
AACCTCTCACCGCTTGCTCAATGTGTTAAAGAGAAAACGAAACAAAACAA
ACCCATCCTATTATCAGCACGAGTAACATACGATGATGACCCAAAAGTCT
TGGAATGGAAAGCTCTGAATGATGTGGAAGCTAACACTGCACTATTGCAA
GAG

Coding sequence (CDS) from alignment at sc0000112_pilon:798763..802665+

>MSTRG.13832.4.p2 ID=MSTRG.13832.4.p2|Name=MSTRG.13832.4.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1305bp|location=Sequence derived from alignment at sc0000112_pilon:798763..802665+ (Clytia hemisphaerica_ch_hm2_pilon)
CTAATTTTTATTTGGATCTTCACTATCGAGATGATCGTCAAAATGTTTGG
TATTGGATTGAGAGCATATTTCCAAATGGGGTTCAATTGTTTTGATTGCA
TCGTTGTCATGTTAAGCATGATGGAATTACTCATCAATGATAATAACAGT
TCCGGTAATTTTACCGTATTCCGGTCATTACGATTACTCCGGATTTTCCG
TCTTATCCGACCGATGCGTCATCAAATTGCCGTTATGTTACGAACAACGT
CGTCCGTCATGACGTTTTTTGCGTTGCTGTTTCTCTTCATGTTCACATTC
GCTATTTTGGGAATGCATATTTTTGGTGGgaaatttgttttcaagaaTCG
ATATGGGAAAATGGTGTTGGCAAGATCcaattttgattcttttgtATGGG
CTATTGTGACTGTTTTCCAGAAGACTGGAATCTAGCTAATTTTTATTTGG
ATCTTCACTATCGAGATGATCGTCAAAATGTTTGGTATTGGATTGAGAGC
ATATTTCCAAATGGGGTTCAATTGTTTTGATTGCATCGTTGTCATGTTAA
GCATGATGGAATTACTCATCAATGATAATAACAGTTCCGGTAATTTTACC
GTATTCCGGTCATTACGATTACTCCGGATTTTCCGTCTTATCCGACCGAT
GCGTCATCAAATTGCCGTTATGTTACGAACAACGTCGTCCGTCATGACGT
TTTTTGCGTTGCTGTTTCTCTTCATGTTCACATTCGCTATTTTGGGAATG
CATATTTTTGGTGGgaaatttgttttcaagaaTCGATATGGGAAAATGGT
GTTGGCAAGATCcaattttgattcttttgtATGGGCTATTGTGACTGTTT
TCCAGAAGACTGGAATCTAGCTAATTTTTATTTGGATCTTCACTATCGAG
ATGATCGTCAAAATGTTTGGTATTGGATTGAGAGCATATTTCCAAATGGG
GTTCAATTGTTTTGATTGCATCGTTGTCATGTTAAGCATGATGGAATTAC
TCATCAATGATAATAACAGTTCCGGTAATTTTACCGTATTCCGGTCATTA
CGATTACTCCGGATTTTCCGTCTTATCCGACCGATGCGTCATCAAATTGC
CGTTATGTTACGAACAACGTCGTCCGTCATGACGTTTTTTGCGTTGCTGT
TTCTCTTCATGTTCACATTCGCTATTTTGGGAATGCATATTTTTGGTGGg
aaatttgttttcaagaaTCGATATGGGAAAATGGTGTTGGCAAGATCcaa
ttttgattcttttgtATGGGCTATTGTGACTGTTTTCCAGAAGACTGGAA
TCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13832MSTRG.13832Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13832.4.p2MSTRG.13832.4.p2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13832.4.p2.exon1MSTRG.13832.4.p2.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13832.4.p2.exon2MSTRG.13832.4.p2.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13832.4.p2.exon3MSTRG.13832.4.p2.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13832.4.p2.exon4MSTRG.13832.4.p2.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13832.4.p2.exon5MSTRG.13832.4.p2.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13832.4.p2.exon6MSTRG.13832.4.p2.exon6Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13832.4.p2.exon7MSTRG.13832.4.p2.exon7Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000112_pilongenomesc0000112_pilon:798763..802665 +