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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:2618912..2626998+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1382.2.p1 ID=MSTRG.1382.2.p1|Name=MSTRG.1382.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8087bp|location=Sequence derived from alignment at sc0000006_pilon:2618912..2626998+ (Clytia hemisphaerica_ch_hm2_pilon)
GAGTTTTCATCTACTGGAACATTAACTGTCAAACCCGACTATACTAAAGG
GTAATCTTCGAAACACAAACAAACATGGCgcaaatttcccaaaatatttc
tGACACTTTGAGAAATGTAAATCTTCAAAATCCAACTCTTTCAACGCTTG
CTAAGAAAGGAAACGAAAGTGTAAGTAATCTATTTATATACTTAAATCGA
TATTTTATATGGATTGTTTAAGTTTATGGACACAGACCTGCACagaccat
tttttttttaacacaaGTAAAATCTCTGGCAATATAGTCTATCAACCGAA
CCCTTATACTTGTCGAACCGATTTTCATaatcgaaccatcaaattttatc
aaacGATGGGTATTCAATTACCAAACTTGATCGAACAGTAATATAAAGTA
TAAAGTTCGATTGCTTATCGCAGTTCTATTAAGTTTGATATCACTAGCTC
AAATGGTTAACCAGTTTACTGCTATAGTGCAACAGCTCTAGCCTAAACGA
TCCCTAATAATCATTGGATTAGCAGAAAAGAGTTGTTCATGCGCTCCGAG
AATGATTAAATCAAACacatcgaacatcaatcaatCGAACTAACCGAACT
TTACCTGGAATTTCTCggttcgatgactgttcgatttggttcggtaatca
aacacttattgcggtttgtgtaatttacgatgcgcgatccaacgattcat
gatgaacgatgcacgatccatgcgtgatttatgccaatttatgttaatta
ttctaattatgcacgaataagttttcataatgctagctacaaacatcata
taacaataacgaaaaaaaaatttaaaaaagaaagggaaataatttatcat
aatcagaatgattaaaataacttatatcttctgtgtagaaaagccaaaaa
ttgatagcaagagaaagaaaatgtttgccTGCATACCTCACtccttttta
aaatgaaagaaaaagccttgacgtcatagaaaagttttggcgcgaaaaat
ttattataacgcaaactcatttttgtacgtttattatttttttaagaaca
gtgaataaaggtaaataaggaatcattggctacattacttttggtgtgtt
cttataaaagcctttcaCCAATTGAATTGCAACtggtgtttttatttatt
tgatatttttctttgttacaCGCACTCTCTTCACTAAAAACGTCTTCcca
caacattgtaaattttttttataaccctgtctcaatccaatgcatttggt
tggtttaatcggagaaacatttttttaaagaaagaaagcaaaaaggttac
aagatattcaattcaaagcatgggcaaaaaagtttatgttttgatttgat
ttgattgtcgaggttaaaatatatacacgcatactttacattgatttccc
aggaatacaaaagaagaaattaaaatatgtgaactgtaaatgcataatta
gaataattaacataacatatgcatggatcgtgcatcgcgcatcgtgaatc
gttggatcgcgcatcgtaaattacacaaaccgcacTTATTGTTCGATTAA
TTTCAAttgagttcgattagttcaatatttcaaaaatagttcaaTTAACA
TTGCCTGGAAAATCTGGGACAGCATATATTTGATAGGGGTACTCagactg
ggcaggggactctacttcaaataattttttatgattttaagaGGGACGTT
CATTTCatttggggggggggagttTAAAAGAAGAGGGTGTTTATTGAATG
ATCTTTTAACCAAGATCAATTTAATAAAGTGGATTGGTGGGGAGGCGTTT
ATTCAAGTGGGAGTTTATTCAAGGGGatgtttgaaaaaagtgaaaaaagg
gggcatttaaaaaaggagcatttatttaaaaaatggcagggaaaatattt
tacaattttcattttcaaaacagaaGTCATGTCAACCTTTTAGGACAAGA
TAGGCAAAGTTTTTTCATTgagatgaaaatttcaatttttacccATATTT
TACCCTTTACATAGCAATACCCCCTTAACTGGCAAAGccccttaggaaat
tcaaacttttaacacccccttgtTTGGGTTTCATCAAGATTTGagacccc
ccccctaaatgtagTGGGTTAGAAActaggcggcaatcaaaaatatgttc
cattcgggtcctaaaacatcttcaaatccagtcagtcggtcggtcggtag
taaattttgtcagatttttaagatctagtaaatcccgataaatcaagtcg
gcaatcaacagaatcttatgttgccatctttaatttgccaaactaaatgt
gTGCGCGCATGTGTTAACCTTAAAGTGGCCCTTATTTCGGCCCCCAGGGC
CCTACCGCGTCGCtgaattttgacatgaaaattacaataagggtacatga
aaaaacttaaacgggactcaatgtgggttaagtaaacaaaaaataatgat
tcaaagacaAGCTCCTTTTGCCCGTGCCTGCCATTATGGGAAAGATCTGA
ACCTGAGAACAGCACCCaaaaaaaTCCAACAATTTTACCAACTTTCCGAA
TAaggttttcttgtaaataaacagGCGGTCGGACGAcccgaatggaacat
atttttgattgcctcCCTATGAACTTCTATCTAATTTCTATCAtccttct
ttaaaaaagaagaagaaaagaatttGCAATTAAGAACAGGGTTGTAATAG
cttttttttcagcaaaaattttcagaGATCACATAATGACTTAAAATAGG
AAATCGATCAGAGGTAGCAGATAAGTATAAGAGGTATATTcgtatttctc
attttttgtacAATAATAATGTATGATAAACAGTTCTTTTGAAATTACAT
TTCAGTTAATTCAAAGATTTCTCACGGAAAACCTTCAGATAAGTGGAGAT
GAAGAGAACAAAATGCAAAGTCAACTTTACATTGGtgattatttctttat
ttttaatttggATGAGTGGACCTTGACAGCCTTGGAGCACAAAGTGAAAG
GATTCCCTGAAAACATAGAAAGATCCTGATTTCAATGTAAAACTTTGCTC
TTTGttagttttagaatttttgtctGGGCTCGCCaaaaaaaTAGCTAACT
CTTTTCTGCTTTGGCAAGAGATCCAAATTACACTTACATACCCCTTCTCA
TAATGTTTCacaattataaaatttttgttgaaaaaatgtttgtcttttca
TCTCTGAAACATTCTTTGTCTTTTGACGTGATAGAGAATTCCCAAAAGGT
TTTATACGTAAAGTAATTGCTTTTTCAAGAGTTCTAAGccaattaaaaat
taaaatacgagCACAAAAATATGTGGTTTGTCCCCTTGCGACCAAAACCG
TTGGTGAAGCCATCACCATCAtaataaaaatcagaaatattTGATTTAGC
AAACAGGTTTTTGTTGCCAGATTTCACTTAGGCACAGATTTTGATTAATT
CGTCTCAGACGTCTGAGATCATCTAAATTTCATCTCAAATCTTGActatt
ttttccttaaaaataagGTCTCAGACGTCTCAGATCATCTGAGATCTTTC
GACATCATCTGAGGTTCATCtcaaattttgactatttttttccttgaaaa
cagCGTATCAGATGTCTCAGATCATCTGAGATCTTTCGAGATCatctgag
gttcgtctcaaattttgaccatttttttccttgaaaacagCGTCTCAGAT
CATCTGAGATCTTTCGAGATCATCTGAGGTTCATCTCaaatttgactatt
tttttccttgaaaacagCGTCCCAGACGTCTCAGATAACCTGAGATCTTT
CAACATCATCTGAGGTTTATCTCAAATTTTGACTATTTATTTCCTTGAAA
ACAGCGTCTCAGACGTCTCAGATCATCTAAAGTCTTATggtcatttcttt
cttttaaatgaattttttccaaaaattgtgaTTAGCCTCAACTGTTTGTG
AAGATAAATGAGCTAATTTAcagcaaatataaaaaataaaaacatattaa
tGGTTCGAGACAATTACAACTAGAGTTATTAAAATTCGAAGCGAAAAGAT
CTAAAGGTTATAATCATTTTGACATTGAATCAGATgatgttttaaaactt
acaaaatagctaagataggagaaaaatatcaaatagtCAAAATTTGAGCC
CAACCTCAGATTATCTCGAAAGGTCTCTGACGATCTGAGACGCTGTTTTC
AAGGAAAGaaatagtcaaaatttgaaatgaaccTCAGATGATCTCGAAAA
GTCTGAGGGCCCTGAGACGTCTCAGATGCACATTTTAAGGACAGAAAGAC
Tttaaacacaggaaaaaattttcgatttccaaggttgaaatttcaagttt
tcttaattggaaaaaagataaaatccaatggaaaatccaacctggaaatg
tgggacattctccaaggttggaaattttgcattttccctggcgtggaatt
ttcaaaaatctaggttgaaaaaagccaaaatccaaagtaaacaaacttgg
aattttcaaaaatcaagcaTTGaataaagccaaaatccaagctaaaaaag
gttggagttttcaaaagctcatgttgaaaaaagccaaaatccaaaaagtg
atggcagagatgtggaaaaagagaTCTCAAAggcttttgtttttgtgaac
attcactcgctagcctaggctcgatggctcccagTCAATCTCTCGTCATt
tttcgcacagatacgtggttgatcttatatcactcacacagctcagcagg
gcaccaTTTGAAACAAGTACCTTCACTGTGCGagctcactgcgattgacc
gaggccgctccgaagggACGCCTCACCTGAAGGAAACTTACatcttgact
gctcacattatagccaAGTATCtggttagctatacatcaaaacagttttg
agcaaaaaatcgcttgtggttttcacAAAGGACATGCGCATAAAATGGTT
ACAAAAACGTAATTttcacatggatttttaacattttccaaacagtttgg
agaaacaaaaatttccaagccaaaaagtctagttttccaattgacagagt
ttcaatttcacaaaaatgtaattttcacatggatttttaacgttttccaa
actgtttggaaaaacacaaatttccaacccaaaaagtctagtttttaaac
cagccttggaaaattgtcatttctacatgggtttttttcactagattttt
caagggcattggtttattctacaaaacatATATGggaaatttacgttttc
caaatcagcttaaggtaatcgctcaaatttccaaacttcaattataaaac
caaaatttccaacccaaaaatgaaaaaaattttccagacGAATTGTGCAA
AATCCGTGCTACACTCCCAGTTTTCCAGGCTAAGTCAGGGCTAAAGTTTG
CTTTGTACATCTCTTAGAAAATCTTCAATAAGTTGTGTagcaaaaattgt
tcaaaatatctttctaaatcaaaacttttttctttttttttaaatatcta
acTGCTCCTTACTAGTCATTAATTATGATAGTCATTTCAATAACATTATT
TACATTATTACAATagtatttttcttttcagcCTCTTTTTGGGGATTTGC
AGATGTAGTGAAAACACTTCTTGAGAATGGCGCAGGTATTTTTATGTAAA
GATACCATTGTTTGATTTTATTACCCTAGACATTTCCTAGCTCACTACGA
ATAAGTTATCCAAGAATTCAGATCAGGAatattacattgaaaaaatcATC
TATAGTTCTTtgacaaaatatattttaataatcCTAAAAACATTCCTCAC
TTCTTCTTTTAATAATAAAACATCCATTAAATGCAAAGATTAAATTATCT
ATTTCCTCTGTTGGTAAGTTTCTTTTTGCAAggtttcgatattttttttt
ccAGATGCAAATGCACAGAATCCTGATACATTATGGACACCATTACATGC
AGCTTCTTTTCAAGAACATGGAAAAGTATGATCTGATCTAGTACTTCAGT
TTCTCTTCaggaatgggcttttccagtaaaatttgaatatgggcggtgga
tataatattttttggaaatttaccccccagacattgtgaattttgaccct
cGAACAGCAGGTCTAcccccaccccctcccccGGCcactcaaacagagca
aaattaaaCCCCATAACAGAACCCGCCGGACAagacaaattttgtagatt
tttcactacccacCGGACACTATATTCTCCACCCGCCTCCCCCATGTACA
AACATTTTCTGGACAAGAGCCCAGTCTtcatctatttttattttacataa
tCCAGGGGAATTGCAGTTGACtgctttttttgaaacttttttaaatactg
ttttcttttGATAGGTGATTATGTTACTACTGCAGAAAAAAGCTGATCCT
TGGCTTGAAGATTTTGAAGGAAGGTGGGAGAATTATTGAATAtgtatacc
gggtgcaccaaaaaaaagtatacaactttgtcaaGATATTGAGAGCTTCA
Ggattcaaactttttgtttattctttttttatcgcatagaggatgctcta
acttgaatttttagctatcatacattaggtttgaaaattatttttaaaaa
aactgactttttttaatgtcgaaatttaaaaaaaatcatcaacttttatc
ttgacacttaccttctttacacataaaaataccgaAAAATGCAGCTCTGT
TCATCAAAATTCGTTACGGAATTTAAgtatatggtaaaacaagctattcc
catgtgggatAACATTTTTGCAAAagctgaaaaaagtttttggaaatctc
caagagaggttttgatgttatgtgtgtgtgtgctatgtgagaaatttttt
gaaaaaatagatcattATTTCTCGACTAGTttctcaaagaacttgggttt
gcattgagtttgcttgtgttggaaatgtttatgacgtgtaaataagatgg
acaagctgttggcaaaatataagttAAGAGAAAATAGAaccaaaaaaaca
atgaaatcatgtttttgtcttttttgtcttatttatagcgtgattgcagt
ttttaatgatttcttaaaatttcgacatggaaaaaaagtcagtactttgg
aaataactttggaactacttttTCGAATTTAATGtataaaagctcaaaat
tcaagttagagcatcctctatacaataaaaaaagaatgaacaaaaaaatt
aagtcctgaagctcacaatatctctataaacctgtatacttttttggtgc
acccggtatgtAAAGTCATGAAAATATTGACCAATTATTGATTTGTTCAG
ATTAACTTCGTCTTCAGGTGGCTTAAAACTCGATTATCCCGGGAGCTTTA
TGTgttgttatcatttttaataaagtttttatttttatcttacttttaGG
TCATCTGTTGATTTTGGCTCAGCCTCAGACAAAATATGGCCACTTTTTGC
TTGTAAGTTGATTTACCTGCCAgaaaacattcaatattttcGGGTTGTCC
TGTTGCCTGGCTTGGGTTCGATAGAGGTCGGAAAAGACTGTTGGTAAAAC
AGTATGAAAATGAACAGTCacaaagactttttttttttcatttagcaTGT
GGATGCACAAAGACTTCAAGgaatgttttgattgaaaaaggTGTCATTCG
AAAGGTACAAGTTTTTAgtacatttttaaaataaaaagtcaaatttattT
ACACCGTAATTTATTATTTAGAATAAAACAAGCATTTAACTCAAGGAATT
TCTTCATTAAAGTATTGTCAGTTTGCAATGGCTTTTTGGAAGAACAAaga
gattttcgatttttggccaCTTTAGGCATGACGGGTGacgtcattaaatt
tttttttgttaatttttaccTTTAATGTCAAGGAACTTGTTTGAACTTAT
GGTACTTACCTTAAGATAGACGACCTTGAATTTTTATGGCTATTTTTGTC
TATAATGTTTGCTCTTCCTATCTACAAAGAGTGTCAATTGGTTTATATCT
TTGTTCTAGAAAATTGATGATGGCAATGTCGGACAAACAGGAAATCGAAC
AGAGAACAGTCTTCGAAGTGGAAATATGAACAACTTG Coding sequence (CDS) from alignment at sc0000006_pilon:2618912..2626998+ >MSTRG.1382.2.p1 ID=MSTRG.1382.2.p1|Name=MSTRG.1382.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2898bp|location=Sequence derived from alignment at sc0000006_pilon:2618912..2626998+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCgcaaatttcccaaaatatttctGACACTTTGAGAAATGTAAATCT
TCAAAATCCAACTCTTTCAACGCTTGCTAAGAAAGGAAACGAAAGTTTAA
TTCAAAGATTTCTCACGGAAAACCTTCAGATAAGTGGAGATGAAGAGAAC
AAAATGCAAAGTCAACTTTACATTGcCTCTTTTTGGGGATTTGCAGATGT
AGTGAAAACACTTCTTGAGAATGGCGCAGATGCAAATGCACAGAATCCTG
ATACATTATGGACACCATTACATGCAGCTTCTTTTCAAGAACATGGAAAA
GTGATTATGTTACTACTGCAGAAAAAAGCTGATCCTTGGCTTGAAGATTT
TGAAGGAAGGTCATCTGTTGATTTTGGCTCAGCCTCAGACAAAATATGGC
CACTTTTTGCTTAAATGGCgcaaatttcccaaaatatttctGACACTTTG
AGAAATGTAAATCTTCAAAATCCAACTCTTTCAACGCTTGCTAAGAAAGG
AAACGAAAGTTTAATTCAAAGATTTCTCACGGAAAACCTTCAGATAAGTG
GAGATGAAGAGAACAAAATGCAAAGTCAACTTTACATTGcCTCTTTTTGG
GGATTTGCAGATGTAGTGAAAACACTTCTTGAGAATGGCGCAGATGCAAA
TGCACAGAATCCTGATACATTATGGACACCATTACATGCAGCTTCTTTTC
AAGAACATGGAAAAGTGATTATGTTACTACTGCAGAAAAAAGCTGATCCT
TGGCTTGAAGATTTTGAAGGAAGGTCATCTGTTGATTTTGGCTCAGCCTC
AGACAAAATATGGCCACTTTTTGCTTAAATGGCgcaaatttcccaaaata
tttctGACACTTTGAGAAATGTAAATCTTCAAAATCCAACTCTTTCAACG
CTTGCTAAGAAAGGAAACGAAAGTTTAATTCAAAGATTTCTCACGGAAAA
CCTTCAGATAAGTGGAGATGAAGAGAACAAAATGCAAAGTCAACTTTACA
TTGcCTCTTTTTGGGGATTTGCAGATGTAGTGAAAACACTTCTTGAGAAT
GGCGCAGATGCAAATGCACAGAATCCTGATACATTATGGACACCATTACA
TGCAGCTTCTTTTCAAGAACATGGAAAAGTGATTATGTTACTACTGCAGA
AAAAAGCTGATCCTTGGCTTGAAGATTTTGAAGGAAGGTCATCTGTTGAT
TTTGGCTCAGCCTCAGACAAAATATGGCCACTTTTTGCTTAAATGGCgca
aatttcccaaaatatttctGACACTTTGAGAAATGTAAATCTTCAAAATC
CAACTCTTTCAACGCTTGCTAAGAAAGGAAACGAAAGTTTAATTCAAAGA
TTTCTCACGGAAAACCTTCAGATAAGTGGAGATGAAGAGAACAAAATGCA
AAGTCAACTTTACATTGcCTCTTTTTGGGGATTTGCAGATGTAGTGAAAA
CACTTCTTGAGAATGGCGCAGATGCAAATGCACAGAATCCTGATACATTA
TGGACACCATTACATGCAGCTTCTTTTCAAGAACATGGAAAAGTGATTAT
GTTACTACTGCAGAAAAAAGCTGATCCTTGGCTTGAAGATTTTGAAGGAA
GGTCATCTGTTGATTTTGGCTCAGCCTCAGACAAAATATGGCCACTTTTT
GCTTAAATGGCgcaaatttcccaaaatatttctGACACTTTGAGAAATGT
AAATCTTCAAAATCCAACTCTTTCAACGCTTGCTAAGAAAGGAAACGAAA
GTTTAATTCAAAGATTTCTCACGGAAAACCTTCAGATAAGTGGAGATGAA
GAGAACAAAATGCAAAGTCAACTTTACATTGcCTCTTTTTGGGGATTTGC
AGATGTAGTGAAAACACTTCTTGAGAATGGCGCAGATGCAAATGCACAGA
ATCCTGATACATTATGGACACCATTACATGCAGCTTCTTTTCAAGAACAT
GGAAAAGTGATTATGTTACTACTGCAGAAAAAAGCTGATCCTTGGCTTGA
AGATTTTGAAGGAAGGTCATCTGTTGATTTTGGCTCAGCCTCAGACAAAA
TATGGCCACTTTTTGCTTAAATGGCgcaaatttcccaaaatatttctGAC
ACTTTGAGAAATGTAAATCTTCAAAATCCAACTCTTTCAACGCTTGCTAA
GAAAGGAAACGAAAGTTTAATTCAAAGATTTCTCACGGAAAACCTTCAGA
TAAGTGGAGATGAAGAGAACAAAATGCAAAGTCAACTTTACATTGcCTCT
TTTTGGGGATTTGCAGATGTAGTGAAAACACTTCTTGAGAATGGCGCAGA
TGCAAATGCACAGAATCCTGATACATTATGGACACCATTACATGCAGCTT
CTTTTCAAGAACATGGAAAAGTGATTATGTTACTACTGCAGAAAAAAGCT
GATCCTTGGCTTGAAGATTTTGAAGGAAGGTCATCTGTTGATTTTGGCTC
AGCCTCAGACAAAATATGGCCACTTTTTGCTTAAATGGCgcaaatttccc
aaaatatttctGACACTTTGAGAAATGTAAATCTTCAAAATCCAACTCTT
TCAACGCTTGCTAAGAAAGGAAACGAAAGTTTAATTCAAAGATTTCTCAC
GGAAAACCTTCAGATAAGTGGAGATGAAGAGAACAAAATGCAAAGTCAAC
TTTACATTGcCTCTTTTTGGGGATTTGCAGATGTAGTGAAAACACTTCTT
GAGAATGGCGCAGATGCAAATGCACAGAATCCTGATACATTATGGACACC
ATTACATGCAGCTTCTTTTCAAGAACATGGAAAAGTGATTATGTTACTAC
TGCAGAAAAAAGCTGATCCTTGGCTTGAAGATTTTGAAGGAAGGTCATCT
GTTGATTTTGGCTCAGCCTCAGACAAAATATGGCCACTTTTTGCTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:2618912..2626998 + |
|
