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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000112_pilon:583915..586490+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13819.1.p1 ID=MSTRG.13819.1.p1|Name=MSTRG.13819.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2576bp|location=Sequence derived from alignment at sc0000112_pilon:583915..586490+ (Clytia hemisphaerica_ch_hm2_pilon)
TAAGAACTTTGTAAGATAAAGAAATGACAACAGTTTTGAGCAGAAAATAA
GCTGAAATAAGCAACAAAATTgaaggaaataaaaaaagcaaTGACTTCAA
CTTACAACAAGATCTTATACCAGTACGTGACAACTTCCATCGGTGCTTTG
GTCATCGCCTCAAACTCCATCATGCTTGTTTGCATTCGACGTTCAAAAGC
ACACAAAAATAAACCGGTCGGTTTTGTTTACGTCATCAATATGGCAGCGT
CTGATTTGTTTGTTGGGGTAACTATGGTGATTCTAAAATCCATGCACCCT
TACATGGGAACAACACTAGCTGAAAATGTTGTGGCGCAAAACATATATCA
CGTGGTTAGATTTTGCATGATTCGATTTTCACTTCTCGTCTCCGTTTTTA
ACTTAGTGGCACTGACCATAGATCGCCTATGCGCGATCCGCTTTCCATTC
TTGGTCCAACGTCAAGATAAAGGATTTCACATCAAAGTCTGTGGCCTTAT
ATGGTTCGTATCACTTGTTATCACTTCCATTTTTTACATTCTGGCaagat
tttatttaaaagacaGTTTACGATACAAAGACGCTATCTTCCCTATCGCG
ACGATTCCGGCAACTGTGTTGTTTGTTGTGAGTTATACGATGATTTTTAC
CGTCGTTCGTCGTACGTCAAATACCGTCAACAGAATTGAAGCATCCGTTA
GGAGACGCAGGATTGATACCGAAGGGGCTGGGGAGAATAATGAAGAAAGA
CGCccggaagaaaaagaaaaggtgaATGTCTATACTTTATACTGTAGATA
GAAAGATATGAGCCCCCTCccccgaatgcattcgggatgggtcctaccca
cgaaggagtaggaatcacggcaccgacagacactgcgacttgacagaaGC
GATCTGCCAAGCCATGCCGTATACTTTATACTGTATGGTTGAATAAATCA
AAATTCTAGGGCTAAGGGTTTGTGATTGAAAATCTTGATCTTGTACAATC
GTTGTTAATTTATATTTCTAGTGGTTAAAGTTAGAATATGCCGATAACAT
CAGCCCCTCCCAAAAATGTTGAAGCTGACGGGAAAAAAGCCTGTGGGGAG
AAGGGAAAGACTTTCAAAGCACTGTTCCATGCATGAGTATTGGTAACGAT
TATAGCagtaaaatgttttaattttcaattttagattgCATTTGTGCGGC
TTGCAGTGAAAACAGTGGCTGTTTTCGTTATATGTTGGCTACCTCTGTCA
ATCACTTCCATCTACAAATTACTCAGCACAGAGGCACCAGACAGAGACCT
CGAATCGAGTTTCTTCACATTAGCCTTTTTCAATTCTCTCATTGACCCAT
TCATCTATTTCGCACATTTAAGACGTGTCATTATCAGAGTTGTGCGTCGT
ATCATGGGTCTGAATACTGAAATGATCATTCAACCACAAAGCTCTGAGAG
ATCTGGCAATTCTCGAAGAGAATCATCAATCAAGTTATCAACAGTGTACA
CGACTCCTCAAAACAGGACGAACCCAGATGTTATCATTTCTGCATCTAAG
ACAGACACATGGGGTTGTTAATTTGGGTTATGATGAAGAACATTCATTGA
ATTCTCCAGACTGTAGCAACAGTGGATGGACGAATTTGAAACCACCAAGT
GAGCGATTGAGTGTTGACGTATTGGTACATCAACTGCCAAGAAGTCTGGA
GCCTGCATAATGGTTAGGCCTTTTTGCATTTGAGCAAGAGTCCTAGTTAG
GTCATCACATTTTTATCGTGCCcccactcgatttctaaacgacggcatga
actgccaaaaaattgattcctaaattggacccttacagtgcagctcttaa
acagtgaaaaggtacccttacccttacagtgcattttactaAACGTTTCT
CTTTCTTACAATGTAGTTATTGATtccatatcttattttgctgatgCCAC
CCAGACCAGCTTGGAGCCCAGCCCCGTTGGAAAAATTGACAGAAATTTCA
GCCGCCCTCTTGGAaataaacttttatttcatcccattcaaaattccata
tttaaaaattgcacttcaaaaccattgccactgaattttttaaacttgga
acaaaggaatttctatccccattaggatttcaataggaatttttatcccc
gctgagaaaaaagttccactggggctgtgagggGTGTTTAAgatgtcgaa
aaaaaaaatgatccaACTgtctaacatttttttaagttttcaaacaaacg
aaCGCTTCCCTCTAACAAGATTTGCCATTGATTTGTTGAGTCGAAATTCA
GCAGAAAGCAACTGTGACAAACGCTTTGAAAAAAGTCGATGATAAAGCAT
TCACGACGAAGGGATAGAACACTCGTATTTTCAAGACGAATGCTTTACGT
ACCTGCTCCAAGCATTTGTACGGCTACAATTCAAAATACGAAGTATAAAC
ACTCAGAAAACTAGTGCTTCTTGTCATTTTAACCTTTGACGATTAATATA
ATGATATAAATTCATGAGCATATTGTAGCTTCAGTTACtaagttaaagtt
ttttttcaaactatcaacaataaaat Coding sequence (CDS) from alignment at sc0000112_pilon:583915..586490+ >MSTRG.13819.1.p1 ID=MSTRG.13819.1.p1|Name=MSTRG.13819.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2136bp|location=Sequence derived from alignment at sc0000112_pilon:583915..586490+ (Clytia hemisphaerica_ch_hm2_pilon)
aTGACTTCAACTTACAACAAGATCTTATACCAGTACGTGACAACTTCCAT
CGGTGCTTTGGTCATCGCCTCAAACTCCATCATGCTTGTTTGCATTCGAC
GTTCAAAAGCACACAAAAATAAACCGGTCGGTTTTGTTTACGTCATCAAT
ATGGCAGCGTCTGATTTGTTTGTTGGGGTAACTATGGTGATTCTAAAATC
CATGCACCCTTACATGGGAACAACACTAGCTGAAAATGTTGTGGCGCAAA
ACATATATCACGTGGTTAGATTTTGCATGATTCGATTTTCACTTCTCGTC
TCCGTTTTTAACTTAGTGGCACTGACCATAGATCGCCTATGCGCGATCCG
CTTTCCATTCTTGGTCCAACGTCAAGATAAAGGATTTCACATCAAAGTCT
GTGGCCTTATATGGTTCGTATCACTTGTTATCACTTCCATTTTTTACATT
CTGGCaagattttatttaaaagacaGTTTACGATACAAAGACGCTATCTT
CCCTATCGCGACGATTCCGGCAACTGTGTTGTTTGTTGTGAGTTATACGA
TGATTTTTACCGTCGTTCGTCGTACGTCAAATACCGTCAACAGAATTGAA
GCATCCGTTAGGAGACGCAGGATTGATACCGAAGGGGCTGGGGAGAATAA
TGAAGAAAGACGCccggaagaaaaagaaaagattgCATTTGTGCGGCTTG
CAGTGAAAACAGTGGCTGTTTTCGTTATATGTTGGCTACCTCTGTCAATC
ACTTCCATCTACAAATTACTCAGCACAGAGGCACCAGACAGAGACCTCGA
ATCGAGTTTCTTCACATTAGCCTTTTTCAATTCTCTCATTGACCCATTCA
TCTATTTCGCACATTTAAGACGTGTCATTATCAGAGTTGTGCGTCGTATC
ATGGGTCTGAATACTGAAATGATCATTCAACCACAAAGCTCTGAGAGATC
TGGCAATTCTCGAAGAGAATCATCAATCAAGTTATCAACAGTGTACACGA
CTCCTCAAAACAGGACGAACCCAGATGTTATCATTTCTGCATCTAAGACA
GACACATGGGGTTGTTAAaTGACTTCAACTTACAACAAGATCTTATACCA
GTACGTGACAACTTCCATCGGTGCTTTGGTCATCGCCTCAAACTCCATCA
TGCTTGTTTGCATTCGACGTTCAAAAGCACACAAAAATAAACCGGTCGGT
TTTGTTTACGTCATCAATATGGCAGCGTCTGATTTGTTTGTTGGGGTAAC
TATGGTGATTCTAAAATCCATGCACCCTTACATGGGAACAACACTAGCTG
AAAATGTTGTGGCGCAAAACATATATCACGTGGTTAGATTTTGCATGATT
CGATTTTCACTTCTCGTCTCCGTTTTTAACTTAGTGGCACTGACCATAGA
TCGCCTATGCGCGATCCGCTTTCCATTCTTGGTCCAACGTCAAGATAAAG
GATTTCACATCAAAGTCTGTGGCCTTATATGGTTCGTATCACTTGTTATC
ACTTCCATTTTTTACATTCTGGCaagattttatttaaaagacaGTTTACG
ATACAAAGACGCTATCTTCCCTATCGCGACGATTCCGGCAACTGTGTTGT
TTGTTGTGAGTTATACGATGATTTTTACCGTCGTTCGTCGTACGTCAAAT
ACCGTCAACAGAATTGAAGCATCCGTTAGGAGACGCAGGATTGATACCGA
AGGGGCTGGGGAGAATAATGAAGAAAGACGCccggaagaaaaagaaaaga
ttgCATTTGTGCGGCTTGCAGTGAAAACAGTGGCTGTTTTCGTTATATGT
TGGCTACCTCTGTCAATCACTTCCATCTACAAATTACTCAGCACAGAGGC
ACCAGACAGAGACCTCGAATCGAGTTTCTTCACATTAGCCTTTTTCAATT
CTCTCATTGACCCATTCATCTATTTCGCACATTTAAGACGTGTCATTATC
AGAGTTGTGCGTCGTATCATGGGTCTGAATACTGAAATGATCATTCAACC
ACAAAGCTCTGAGAGATCTGGCAATTCTCGAAGAGAATCATCAATCAAGT
TATCAACAGTGTACACGACTCCTCAAAACAGGACGAACCCAGATGTTATC
ATTTCTGCATCTAAGACAGACACATGGGGTTGTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000112_pilon | genome | sc0000112_pilon:583915..586490 + |
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