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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000112_pilon:338510..343912- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13800.3.p2 ID=MSTRG.13800.3.p2|Name=MSTRG.13800.3.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5403bp|location=Sequence derived from alignment at sc0000112_pilon:338510..343912- (Clytia hemisphaerica_ch_hm2_pilon)
ATTTTAATTTTCGTACGTCATTTATCTATGAGTATTTCTGCCTTTGGTGA
GAATTGTGTCTTCAGCAAAGTGTGTATTTGGCTACCATTTCTTCGAACAC
AAAAGTGAAAGAAGGAAGTCTATAGTATTGTCATCCTTCTACTTTAATCC
TAATAATACATTTCAATTCAAAAACTAGGTAGTCGGTGAAATTAGATGCG
AGTGGATTTGTCTGTTTTCTATTAAACGTGACTAAATATAAGTCTTCCTT
CAGTTGTACCGTACATTCATCTTAGTTGTAGAAGGTCATTGGTTTAATGA
CTGGATTACCACGGATTATTTTACGTTCGTTTTTTGTCATATAAATGGAT
TAGGATGGTCTAACATCTGCGAAGACTTTTTGAGGAACCTTTCTTATTCA
AGTCACGTATAAGGAAAGCTTTCGAATCGAATCTCAAAAGGATGGTTCAT
TTAGCGCTGTCGACCTTTTAACCAAAATAGACTCTTTTTTTATTATTTTT
AGCCCATACTTTCAGTCTGGTCCCTTCGGGTGTTTTTGCACTTTTTAAAG
GTAAATGAAAGATATAAGGGTTGAGAACCAGTGTCGAAAAGCAGGTGAAT
CTTTCTAGGCGCTATCAATTCTTAATCATTTTCAGTGTTCTTTTTTTTTC
TCAAACAATCAGTGAAATTTCATATGTTCTCTTCTTCATTCACGATTCTG
CTTCTATATGAAAGATGGTTTGAGATATACATTTTTAATATTTTATTTTT
CGCTCTTCTTCTCTTCTCTCACGTTCCTCTTATATTTTGAAGAAGAAATA
TTATAGTATTGGATTTAGAAAATTTTTCATGCGAACAAAAAATCTTAAAA
TTTGAAAAATAAAACAATATTGGAGAAATTGATGTTTAAATGGCAGAGCA
GGAAAATACAGACGGTTTGCTTGATCAAACGAAACTGGGAAGAAACGAGC
TAAAATTGAAACGGTAATATCTGATTGGTTGATGGTTTCTTAAAGAATTA
TAAATACTCTGTGGTTTAATTATTGTAACAGCTTAATTGAGATACATAGT
TTTTAGAAATTACTGACTGTCCACTCTTGTATATAGACATTCTTCACATT
GCAGATGTGTGTTCTTCGTAATGCAAAAGCCCGGTTGAGGGGGTACTAGG
TTTGCGAGATGACGCGTATGTCAAAGCCTAAGTTTGAAAACCTTTGAAAG
ACTGAATTTCGAAAATTTTGCTCCTTTTTTGACGTGTTTGCGACCTTTGG
CAACATTTGTTTTCCTCCTTTGAAAATAATGTTTTTATAATCAACACACC
CCTGTTTCACTGAACCGGTCAGCTTTTTTTACAATAAATAGATACTTCTT
ACCCAAATGGTCGTAAATTGAAGCCACTCCTTCTTGATTAATCCTTCTAT
ATGGCATGGTTAATTCTCACTTTGTTGATCAAAGACTATTTACTGGGGAA
TCGAAAATAACCTCAAAGGTGGCTGATGAAAAATCCTCAAATTACCAAAA
CAATCAACAAATCTGAATAAAAAACATCAAATAAAAATCTTAATTCTGGT
AAAGCCCCTGTATGATCCTTGGTACAGCTGATAAATGCTTACCACGTTCA
GTGGCACATCAACGTACCCTGTTTAAGGGGCGTTTACCCCATTATAGGAT
AAAAGGAACCCTGTGTGTGGTGTGTGTTTCATTAGGTAAGAATCTTGTGA
ATGTTTCAAGGAATAATTGCTTCATCCTTTGAATTATTATCATCAATTAC
TAATCTAAACATTAGTTTCGTGTATGACAATCAGTGTTGATTAATTCAAA
TTATTCAGAGGTAAAAAGGATGTATTTCTCTGGAAACTCATCATTTTTTC
GCTCAACAGTTTATATGTATTGGTGAAGGTCTGAACTGAAATATCGGTTA
TTCGTTGTATGCTTGTATCATTTACCAATGTGAGTAGCTCAATTTTTGCG
AGACATGCTTGGCAGTACTCTAGAAGTAGGAAGCCCAGCTGGCAAACGTC
GTTTTAGCGTTACATGAAAGTTAAGGACGTCAGATTGACGTTGATATAAC
TTTCTGTACCATCTTGAGCACAATTTTATTCGAGTTGAGGAAATTTCAAA
AGTTGAAGTATTATTAACGGAAGGGACTAGAAAACATTGTTTGAGTTAAG
GAGACATTCGAGTTCTAGATGTTCGAGTTAAAGAGATTCCGCTGTATATC
TACAATCACCCCTGTGGTAGTCGGCAGTAGAAAGTATTTTCCTAGACTCT
TCATGTGTTTTTTATCACTTAAAACCTACACGTTTTTTTTATAAGGAACA
CATGGGCAAGCGAAATCGTCGGCCTTTTCAATACACGTCAGATCTGAATC
TGACGGTATTCCAAAAAACATTAGACGTATTATAGAGTAGTATGGTTGTA
ACATGATATATAATATACTATTTAAAAAAATATTTCGCCTGCCTATACAT
TGCGAGCTTGCCACACGTTTATAAGGAGCTCGTCGAGGCTGAAAATGGTC
CAAAAAATAAGGAATGGTTAAGGAACTGGTCAGGCTGAGAATAAGAAACT
AAGTTTTAAGGAATCCAATTTTTGCGAATCCAAACTTAGTAGCTATGTAA
AAAAGGAACTTGATAAGGAACTTTGATGTTGAAATTCTCTGTAAAAATAA
GGAACTCCAGGCTCAGAGCAAAGTTAAGGTTCCTTATAAAAAAAAACGTG
TACCAAAACTTCAGAGTGTGGTTTCAGTTCTCTGGGGCTCCGCATCTATT
AAGGTCGGAGGCTTGAGGCTAAAAGGAGGTATAAGAACATTCAAAATTTT
TGAAGTCTTTGGATGTTCTTAGCTTTTTGAGTTTTAAGCCTAAAAATATT
TTTAACATGTTCTTATTTTCACCATTTCGTGAGTATTTTTTGTCCATTTT
CCTAAGAAACCGGGTGTTTTAGAGTTCGCAAATCCTGGCTATTTATCGAA
GCCTTTTGTTCTTATATAGTTTGTTCATGTTTGTTCTTATAATATGACTG
CACTGATTTTAGCTTATGATATGAAAGACAACCAAAGAAATTATAGAAGC
AATGCTAGAAAAAAATGCGGGGAGACTAATCCTAGCTTACTCTCGGCAAC
GTCATAACTGTGTTTTTCATTCAATAACCTTTTTATAATGTTGTTATAAC
GGTCGCCACCACCCACCACACCAAAAGAATCACTTTTTCAGGTTTATTGG
TTTTTATCTCAAAGCGCAATCTCTCCTGTAATGAAGCTGAAAACAAGATG
CCTGCCAAGTTTCTTTATCTGTTATAATTTTCTTGTCTGCTTTTTACGTA
AAAATTAAATAGGCTTTCTTAGAAAAGCTTTATATATTTTTTAAAGTTAA
GTCGATTTGTATGATAATTTTCTCTTTTTGTAGCAGACTGCTCTTCTTTA
AAAGTTTTGGTTGGTGTTCATTCACTTCATATGTTTTATAGATGGTAGAA
TGACATTCATTTATCATGTATTTTAGGAGAGGACCACGTCTTTGGCACAA
ATGGGTCGGTTTATGTCGTCGTATCAACCATTCTCTAGAGAAAGTCTTTA
CAAATCTTGGTTACATCATCACAAAGCGACCGAATTTGACCATCATTCTT
GGTGTGCTTATATCCTTAGCATTGATAGGTAAGATGTTTCAAATATTTTT
AAACCCCTGTCACACTGTCCATTTACTCACAACATGCGTGAATTCGAAAA
CGCCGGATACTTTGAATTAATAAGTTGTGGACTGTTGTCTTTTTAATCTT
GAAATTCATCCTCTTTATGTTTTGTCAAAAATGAGGCTTTCAATACCGGA
CCCTTTAAAATACAGAAAGATTTCGTCAAAAGAAGCTCTCCAAAAAGTTC
ATCGATTCATCTACTAAAAAGACATTGATTTTGTTAAAGTTAACTTCCTC
TTTTCCCAACACATAAGGTTTGTTTTGTTTAATCATAGTACTACTTTTCG
ACTTGGGAAAAATCTAACTGTATCGTCGATCTTCAGCGATTCCGCCATTT
AAAAGGGTGGAAAGGTATCCCGTTGCTCATTTACAAATATGCATTTCTTT
ATCAAACAGGTGGATTTGCTCGATACAACCTCATCAAACGAGCTGAAGAT
CTTTATTTACCAAAGAACAGCGAAGCCAGTAAAGATCTTGATCGAGTCGA
AGAAAACTTTCCAATGAGTTTCAAATCAGAGTCGTTCATCATTCGGCCTA
AAGACGCCAATGCGCCATTATTGACGGAAGAAATTTTCAAAGAAGCGTTA
GAGATACACCATGAGATCATGAATATTCCAGGTTTAACAGATGTTTGTAT
AATGAACGAACGGTTGAACACGTGTGCTGTTCTATCACCGTTAGAATTTT
TCAATTTCAACATCTCAAACATTCAAAACGTATCACAGAGATTACATCAA
GTGTTAAATGATTCTAAAGTTCTATCAAGTGATGGTCGACAAGCGTATAC
GAACTTCCCTTACTATTTCTCATATTTCGAAACAACTTTAACAACCCAGG
GCATGCAAATCGTAAGAGCTGACGCTTTGAAGACCGACTATTTTGTAAAA
GATCCGTCGAGTAAAGGTATTTATGGAAAGCTGGAAAGTTTCGAAGATAA
ATACGTTGATATCATGTCCAGAAAGGAGAGAGAGCTTGACAACAAAGGTT
TAATTCTTCTATACAATTTTGGACGAAGCATTGACATCTCAGTTAGTGAC
TCAACACAGAAGGACATAATTTTAGTACCTGTGGCTTTACTGCTGATGGT
TATATTCTGCGGGCTGTCATTAGCCCGATTCAGGAACCGAATACTTGGCC
ATTTCAATTTAGCACTTGCTGGTGTTCTAATGTTATTCTTAGCAATCGCT
TCTGCGTTTTGTTTTATCATGCTTATCGGAGCACCGTACATCGCATTCGC
TGGAGTCTACCTTTCCTTGTTCTCGGGGTTGGTATCGACGATATATTTAT
TATCATCGATTCCGTCGATCGCCAACATCCATCAATCAAATCGAACACCA
GAATTGCCAAAGCTTTGGGTGAAGTTTGCGCCTCTATAACAATGACTACT
TTAACGGATCTTGTAGCTTTTTTTGTTTCCATGGTGACTGATTTCCCAGC
AATCCGATATTTTTGCATGTATGCAGCATTTAGTATCACTTTCTGCTACA
TCTTGGTTATCACCGTGTTTGTGGCTTTGTTGTCATTTGACGTGAAAAGG
ATTGAGGCGGGACAGTTCGATGTCATTCCATGTGTTGCCAATAATAAAGA
AACGACCGAGGAGGTCTGGGAAGAAGCAGGTGAATCCATGATTAACAAGG
TATGGAACTATCTTTTTATATCTGATATTTTTTTTCTTTATAATATAGGT
TACACGGTACACTAACGAACAAATAAGACGAAACACTACTGACAAAAAAT
AAT Coding sequence (CDS) from alignment at sc0000112_pilon:338510..343912- >MSTRG.13800.3.p2 ID=MSTRG.13800.3.p2|Name=MSTRG.13800.3.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=324bp|location=Sequence derived from alignment at sc0000112_pilon:338510..343912- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTACTTTAACGGATCTTGTAGCTTTTTTTGTTTCCATGGTGACTGA
TTTCCCAGCAATCCGATATTTTTGCATGTATGCAGCATTTAGTATCACTT
TCTGCTACATCTTGGTTATCACCGTGTTTGTGGCTTTGTTGTCATTTGAC
GTGAAAAGGATTGAGGCGGGACAGTTCGATGTCATTCCATGTGTTGCCAA
TAATAAAGAAACGACCGAGGAGGTCTGGGAAGAAGCAGGTGAATCCATGA
TTAACAAGGTATGGAACTATCTTTTTATATCTGATATTTTTTTTCTTTAT
AATATAGGTTACACGGTACACTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000112_pilon | genome | sc0000112_pilon:338510..343912 - |
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